RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 NOL9Q5SY16 702 aaKnown RBP10.85□□□□□ -0.67
USP39-214ENST00000474572 ZNF397Q8NF99 534 aaPredicted RBP10.85□□□□□ -0.67
USP39-214ENST00000474572 SYTL5Q8TDW5 730 aaPredicted RBP10.85□□□□□ -0.67
USP39-214ENST00000474572 BAP1Q92560 729 aa10.85□□□□□ -0.67
USP39-214ENST00000474572 EEF2KMTQ96G04 330 aa10.85□□□□□ -0.67
USP39-214ENST00000474572 FIZ1Q96SL8 496 aa10.85□□□□□ -0.67
USP39-214ENST00000474572 ZNF577Q9BSK1 485 aa10.85□□□□□ -0.67
USP39-214ENST00000474572 HAUS4Q9H6D7 363 aa10.85□□□□□ -0.67
USP39-214ENST00000474572 AS3MTQ9HBK9 375 aa10.85□□□□□ -0.67
USP39-214ENST00000474572 JADE2Q9NQC1 790 aa10.85□□□□□ -0.67
USP39-214ENST00000474572 TYW1Q9NV66 732 aaKnown RBP10.85□□□□□ -0.67
USP39-214ENST00000474572 ODF2LQ9ULJ1 636 aa10.85□□□□□ -0.67
USP39-214ENST00000474572 ADAMTS5Q9UNA0 930 aa10.85□□□□□ -0.67
USP39-214ENST00000474572 ARID2Q68CP9 1835 aa10.85□□□□□ -0.67
USP39-214ENST00000474572 WDR81Q562E7 1941 aa10.85□□□□□ -0.67
USP39-214ENST00000474572 ASTN1O14525 1302 aa10.84□□□□□ -0.67
USP39-214ENST00000474572 RSPH10B2B2RC85 870 aa10.84□□□□□ -0.67
USP39-214ENST00000474572 IPO5O00410 1097 aaKnown RBP10.84□□□□□ -0.67
USP39-214ENST00000474572 PES1O00541 588 aaKnown RBP10.84□□□□□ -0.67
USP39-214ENST00000474572 CETN3O15182 167 aa10.84□□□□□ -0.67
USP39-214ENST00000474572 EPHB6O15197 1021 aa10.84□□□□□ -0.67
USP39-214ENST00000474572 SLC16A3O15427 465 aaKnown RBP10.84□□□□□ -0.67
USP39-214ENST00000474572 DHX15O43143 795 aaKnown RBP10.84□□□□□ -0.67
USP39-214ENST00000474572 CALUO43852 315 aaPredicted RBP10.84□□□□□ -0.67
USP39-214ENST00000474572 LYPLA2O95372 231 aa10.84□□□□□ -0.67
USP39-214ENST00000474572 LCA5LO95447 670 aa10.84□□□□□ -0.67
USP39-214ENST00000474572 RSPH10BP0C881 870 aa10.84□□□□□ -0.67
USP39-214ENST00000474572 GUCY2CP25092 1073 aa10.84□□□□□ -0.67
USP39-214ENST00000474572 OAZ1P54368 228 aa10.84□□□□□ -0.67
USP39-214ENST00000474572 BACE1P56817 501 aa10.84□□□□□ -0.67
USP39-214ENST00000474572 UBXN2AP68543 259 aa10.84□□□□□ -0.67
USP39-214ENST00000474572 KRT83P78385 493 aa10.84□□□□□ -0.67
USP39-214ENST00000474572 MRPS9P82933 396 aaKnown RBP10.84□□□□□ -0.67
USP39-214ENST00000474572 MTMR2Q13614 643 aa10.84□□□□□ -0.67
USP39-214ENST00000474572 CTTNQ14247 550 aaKnown RBP10.84□□□□□ -0.67
USP39-214ENST00000474572 CCDC40Q4G0X9 1142 aa10.84□□□□□ -0.67
USP39-214ENST00000474572 MUM1L1Q5H9M0 696 aa10.84□□□□□ -0.67
USP39-214ENST00000474572 FRMD5Q7Z6J6 570 aa10.84□□□□□ -0.67
USP39-214ENST00000474572 NELFCDQ8IXH7 590 aa10.84□□□□□ -0.67
USP39-214ENST00000474572 PDCL2Q8N4E4 241 aa10.84□□□□□ -0.67
USP39-214ENST00000474572 LRRN4CLQ8ND94 238 aa10.84□□□□□ -0.67
USP39-214ENST00000474572 IL31RAQ8NI17 732 aa10.84□□□□□ -0.67
USP39-214ENST00000474572 PURBQ96QR8 312 aaKnown RBP10.84□□□□□ -0.67
USP39-214ENST00000474572 NACC1Q96RE7 527 aa10.84□□□□□ -0.67
USP39-214ENST00000474572 IRX2Q9BZI1 471 aaPredicted RBP10.84□□□□□ -0.67
USP39-214ENST00000474572 RPAP3Q9H6T3 665 aaPredicted RBP10.84□□□□□ -0.67
USP39-214ENST00000474572 RAVER2Q9HCJ3 691 aaKnown RBP10.84□□□□□ -0.67
USP39-214ENST00000474572 AGO4Q9HCK5 861 aaKnown RBP10.84□□□□□ -0.67
USP39-214ENST00000474572 LZTFL1Q9NQ48 299 aa10.84□□□□□ -0.67
USP39-214ENST00000474572 TBC1D7Q9P0N9 293 aa10.84□□□□□ -0.67
USP39-214ENST00000474572 WRAP73Q9P2S5 460 aaPredicted RBP10.84□□□□□ -0.67
USP39-214ENST00000474572 SCAF8Q9UPN6 1271 aaKnown RBP10.84□□□□□ -0.67
USP39-214ENST00000474572 GJA3Q9Y6H8 435 aa10.84□□□□□ -0.67
USP39-214ENST00000474572 ZMYM2Q9UBW7 1377 aa10.84□□□□□ -0.67
USP39-214ENST00000474572 MYPNQ86TC9 1320 aa10.84□□□□□ -0.67
USP39-214ENST00000474572 EFCAB8A8MWE9 144 aa10.83□□□□□ -0.68
USP39-214ENST00000474572 ATP2A1O14983 1001 aa10.83□□□□□ -0.68
USP39-214ENST00000474572 ZBED4O75132 1171 aa10.83□□□□□ -0.68
USP39-214ENST00000474572 TBCAO75347 108 aaKnown RBP10.83□□□□□ -0.68
USP39-214ENST00000474572 MYBP10242 640 aa10.83□□□□□ -0.68
USP39-214ENST00000474572 PTPRAP18433 802 aa10.83□□□□□ -0.68
USP39-214ENST00000474572 MAPK8IP2Q13387 824 aaPredicted RBP10.83□□□□□ -0.68
USP39-214ENST00000474572 DGKZQ13574 1117 aa10.83□□□□□ -0.68
USP39-214ENST00000474572 R3HDM1Q15032 1099 aaKnown RBP10.83□□□□□ -0.68
USP39-214ENST00000474572 TKFCQ3LXA3 575 aa10.83□□□□□ -0.68
USP39-214ENST00000474572 ARHGAP29Q52LW3 1261 aa10.83□□□□□ -0.68
USP39-214ENST00000474572 DPY19L2P1Q6NXN4 242 aa10.83□□□□□ -0.68
USP39-214ENST00000474572 XRRA1Q6P2D8 792 aa10.83□□□□□ -0.68
USP39-214ENST00000474572 PDXDC1Q6P996 788 aa10.83□□□□□ -0.68
USP39-214ENST00000474572 SLC35F6Q8N357 371 aa10.83□□□□□ -0.68
USP39-214ENST00000474572 ZNF280CQ8ND82 737 aa10.83□□□□□ -0.68
USP39-214ENST00000474572 SYN2Q92777 582 aaPredicted RBP10.83□□□□□ -0.68
USP39-214ENST00000474572 CARD6Q9BX69 1037 aa10.83□□□□□ -0.68
USP39-214ENST00000474572 STRA6Q9BX79 667 aa10.83□□□□□ -0.68
USP39-214ENST00000474572 NHEJ1Q9H9Q4 299 aaPredicted RBP10.83□□□□□ -0.68
USP39-214ENST00000474572 ZNHIT6Q9NWK9 470 aaKnown RBP10.83□□□□□ -0.68
USP39-214ENST00000474572 GPRC5DQ9NZD1 345 aa10.83□□□□□ -0.68
USP39-214ENST00000474572 CEP72Q9P209 647 aa10.83□□□□□ -0.68
USP39-214ENST00000474572 ARHGAP20Q9P2F6 1191 aa10.83□□□□□ -0.68
USP39-214ENST00000474572 SSU72P8A0A1W2PR75 194 aa10.82□□□□□ -0.68
USP39-214ENST00000474572 C19orf81C9J6K1 198 aa10.82□□□□□ -0.68
USP39-214ENST00000474572 VWA5AO00534 786 aa10.82□□□□□ -0.68
USP39-214ENST00000474572 TGFB1I1O43294 461 aa10.82□□□□□ -0.68
USP39-214ENST00000474572 PPP1R37O75864 691 aa10.82□□□□□ -0.68
USP39-214ENST00000474572 FLOT1O75955 427 aa10.82□□□□□ -0.68
USP39-214ENST00000474572 NOL4O94818 638 aa10.82□□□□□ -0.68
USP39-214ENST00000474572 ABL1P00519 1130 aa10.82□□□□□ -0.68
USP39-214ENST00000474572 MAPTP10636 758 aaKnown RBP10.82□□□□□ -0.68
USP39-214ENST00000474572 ALAS1P13196 640 aa10.82□□□□□ -0.68
USP39-214ENST00000474572 H2AFXP16104 143 aaPredicted RBP10.82□□□□□ -0.68
USP39-214ENST00000474572 NR2F2P24468 414 aa10.82□□□□□ -0.68
USP39-214ENST00000474572 DSG3P32926 999 aa10.82□□□□□ -0.68
USP39-214ENST00000474572 VAV2P52735 878 aa10.82□□□□□ -0.68
USP39-214ENST00000474572 RPS6P62753 249 aaKnown RBP10.82□□□□□ -0.68
USP39-214ENST00000474572 AMPD2Q01433 879 aa10.82□□□□□ -0.68
USP39-214ENST00000474572 RAD51AP2Q09MP3 1159 aa10.82□□□□□ -0.68
USP39-214ENST00000474572 MAPK7Q13164 816 aa10.82□□□□□ -0.68
USP39-214ENST00000474572 ITGB3BPQ13352 177 aaPredicted RBP10.82□□□□□ -0.68
USP39-214ENST00000474572 ADAM9Q13443 819 aa10.82□□□□□ -0.68
USP39-214ENST00000474572 PGM5Q15124 567 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms