RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 SMAD5Q99717 465 aaKnown RBP6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 SH3GL3Q99963 347 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 SCHIP1Q9P0W5 487 aaPredicted RBP6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 RRP7AQ9Y3A4 280 aaKnown RBP6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 DNMT3AQ9Y6K1 912 aaPredicted RBP6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 A0A1B0GVC2 190 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 FAM221AA4D161 298 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 SMIM22K7EJ46 135 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 PIK3CDO00329 1044 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 FYB1O15117 783 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 KDM1AO60341 852 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 FOXD2O60548 495 aaPredicted RBP6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 ADAMTS4O75173 837 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 GUCA1CO95843 209 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 PTPN12Q05209 780 aaKnown RBP6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 PPP2R5DQ14738 602 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 SAFBQ15424 915 aaKnown RBP eCLIP6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 INAQ16352 499 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 TBC1D25Q3MII6 688 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 SH2D4BQ5SQS7 431 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 FKBP15Q5T1M5 1219 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 LDHAL6AQ6ZMR3 332 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 ARMC9Q7Z3E5 817 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 PASD1Q8IV76 773 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 PLEKHM2Q8IWE5 1019 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 TBC1D21Q8IYX1 336 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 SYNE4Q8N205 404 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 ERMNQ8TAM6 284 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 CTNNBL1Q8WYA6 563 aaPredicted RBP6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 EMID1Q96A84 441 aaPredicted RBP6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 GMCL1Q96IK5 515 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 RHOBTB2Q9BYZ6 727 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 TNMDQ9H2S6 317 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 VCX3BQ9H321 246 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 ABCF3Q9NUQ8 709 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 CEP72Q9P209 647 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 NFKBIL1Q9UBC1 381 aaPredicted RBP6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 PFDN2Q9UHV9 154 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 DMTF1Q9Y222 760 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 CNPY2Q9Y2B0 182 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 IQGAP3Q86VI3 1631 aa6.76□□□□□ -1.33
SMARCE1-208ENST00000474246 ITSN1Q15811 1721 aa6.75□□□□□ -1.33
SMARCE1-208ENST00000474246 FAM155AB1AL88 458 aaPredicted RBP6.75□□□□□ -1.33
SMARCE1-208ENST00000474246 HNRNPCL2B2RXH8 293 aa6.75□□□□□ -1.33
SMARCE1-208ENST00000474246 EIF3FO00303 357 aaPredicted RBP6.75□□□□□ -1.33
SMARCE1-208ENST00000474246 NMT2O60551 498 aa6.75□□□□□ -1.33
SMARCE1-208ENST00000474246 HNRNPCL1O60812 293 aaKnown RBP6.75□□□□□ -1.33
SMARCE1-208ENST00000474246 ZNF254O75437 659 aa6.75□□□□□ -1.33
SMARCE1-208ENST00000474246 USP2O75604 605 aaPredicted RBP6.75□□□□□ -1.33
SMARCE1-208ENST00000474246 CAPNS1P04632 268 aa6.75□□□□□ -1.33
SMARCE1-208ENST00000474246 CA8P35219 290 aa6.75□□□□□ -1.33
SMARCE1-208ENST00000474246 RRP1P56182 461 aaKnown RBP6.75□□□□□ -1.33
SMARCE1-208ENST00000474246 BECN1Q14457 450 aa6.75□□□□□ -1.33
SMARCE1-208ENST00000474246 NR6A1Q15406 480 aa6.75□□□□□ -1.33
SMARCE1-208ENST00000474246 PPP1R7Q15435 360 aa6.75□□□□□ -1.33
SMARCE1-208ENST00000474246 OASLQ15646 514 aaKnown RBP6.75□□□□□ -1.33
SMARCE1-208ENST00000474246 CLUL1Q15846 466 aa6.75□□□□□ -1.33
SMARCE1-208ENST00000474246 KBTBD12Q3ZCT8 623 aa6.75□□□□□ -1.33
SMARCE1-208ENST00000474246 AKNAD1Q5T1N1 836 aa6.75□□□□□ -1.33
SMARCE1-208ENST00000474246 ZNF697Q5TEC3 545 aa6.75□□□□□ -1.33
SMARCE1-208ENST00000474246 SLC7A5P1Q8MH63 180 aa6.75□□□□□ -1.33
SMARCE1-208ENST00000474246 SPERTQ8NA61 448 aa6.75□□□□□ -1.33
SMARCE1-208ENST00000474246 NFATC2IPQ8NCF5 419 aa6.75□□□□□ -1.33
SMARCE1-208ENST00000474246 FBF1Q8TES7 1133 aa6.75□□□□□ -1.33
SMARCE1-208ENST00000474246 HNRNPLLQ8WVV9 542 aaKnown RBP6.75□□□□□ -1.33
SMARCE1-208ENST00000474246 KCNN1Q92952 543 aa6.75□□□□□ -1.33
SMARCE1-208ENST00000474246 SEC16BQ96JE7 1060 aa6.75□□□□□ -1.33
SMARCE1-208ENST00000474246 TTPALQ9BTX7 342 aa6.75□□□□□ -1.33
SMARCE1-208ENST00000474246 SSX2IPQ9Y2D8 614 aa6.75□□□□□ -1.33
SMARCE1-208ENST00000474246 SLC4A7Q9Y6M7 1214 aa6.75□□□□□ -1.33
SMARCE1-208ENST00000474246 SPTBN5Q9NRC6 3674 aaKnown RBP6.75□□□□□ -1.33
SMARCE1-208ENST00000474246 LMO7Q8WWI1 1683 aa6.75□□□□□ -1.33
SMARCE1-208ENST00000474246 TRPM3Q9HCF6 1732 aaPredicted RBP6.75□□□□□ -1.33
SMARCE1-208ENST00000474246 ABHD14A-ACY1A0A1B0GW23 586 aa6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 FSD2A1L4K1 749 aa6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 SERTM1A2A2V5 107 aa6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 F5H423 210 aaPredicted RBP6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 WASLO00401 505 aaPredicted RBP6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 ZSCAN9O15535 394 aaPredicted RBP6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 SGSM2O43147 1006 aa6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 HOXC11O43248 304 aaPredicted RBP6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 FKTNO75072 461 aa6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 ZBED4O75132 1171 aa6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 RFPL1O75677 317 aa6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 SNX4O95219 450 aa6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 XPAP23025 273 aaPredicted RBP6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 CHKAP35790 457 aa6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 ASMTP46597 345 aa6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 PEX5P50542 639 aa6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 SMTNP53814 917 aa6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 CYP4A11Q02928 519 aa6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 IFRD2Q12894 506 aaPredicted RBP6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 G3BP1Q13283 466 aaKnown RBP eCLIP6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 NMIQ13287 307 aaPredicted RBP6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 DSC3Q14574 896 aa6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 CCNG2Q16589 344 aa6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 CNSTQ6PJW8 725 aa6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 C4orf50Q6ZRC1 276 aa6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 GALNT13Q8IUC8 556 aa6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 ATP11CQ8NB49 1132 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms