RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 ZNF577Q9BSK1 485 aa21.14■□□□□ 0.97
CCDC171-206ENST00000474193 TANC1Q9C0D5 1861 aa21.13■□□□□ 0.97
CCDC171-206ENST00000474193 IPO5O00410 1097 aaKnown RBP21.13■□□□□ 0.97
CCDC171-206ENST00000474193 BACH1O14867 736 aa21.13■□□□□ 0.97
CCDC171-206ENST00000474193 NBNO60934 754 aa21.13■□□□□ 0.97
CCDC171-206ENST00000474193 SLC26A2P50443 739 aa21.13■□□□□ 0.97
CCDC171-206ENST00000474193 RABGGTBP53611 331 aa21.13■□□□□ 0.97
CCDC171-206ENST00000474193 HIC1Q14526 733 aa21.13■□□□□ 0.97
CCDC171-206ENST00000474193 GALNT17Q6IS24 598 aa21.13■□□□□ 0.97
CCDC171-206ENST00000474193 LMBR1Q8WVP7 490 aa21.13■□□□□ 0.97
CCDC171-206ENST00000474193 GTF3C6Q969F1 213 aa21.13■□□□□ 0.97
CCDC171-206ENST00000474193 TRPC6Q9Y210 931 aa21.13■□□□□ 0.97
CCDC171-206ENST00000474193 TELO2Q9Y4R8 837 aa21.13■□□□□ 0.97
CCDC171-206ENST00000474193 DDX39AO00148 427 aaKnown RBP21.12■□□□□ 0.97
CCDC171-206ENST00000474193 USP11P51784 963 aa21.12■□□□□ 0.97
CCDC171-206ENST00000474193 GRIK4Q16099 956 aa21.12■□□□□ 0.97
CCDC171-206ENST00000474193 MIS18BP1Q6P0N0 1132 aa21.12■□□□□ 0.97
CCDC171-206ENST00000474193 HERC6Q8IVU3 1022 aa21.12■□□□□ 0.97
CCDC171-206ENST00000474193 MAFAQ8NHW3 353 aaPredicted RBP21.12■□□□□ 0.97
CCDC171-206ENST00000474193 SEPT8Q92599 483 aa21.12■□□□□ 0.97
CCDC171-206ENST00000474193 TUBE1Q9UJT0 475 aa21.12■□□□□ 0.97
CCDC171-206ENST00000474193 PCDHA4Q9UN74 947 aa21.12■□□□□ 0.97
CCDC171-206ENST00000474193 FAM86B1E9PN63 330 aa21.11■□□□□ 0.97
CCDC171-206ENST00000474193 TLL1O43897 1013 aa21.11■□□□□ 0.97
CCDC171-206ENST00000474193 LARGE1O95461 756 aa21.11■□□□□ 0.97
CCDC171-206ENST00000474193 CTSHP09668 335 aa21.11■□□□□ 0.97
CCDC171-206ENST00000474193 FAM86B2P0C5J1 330 aa21.11■□□□□ 0.97
CCDC171-206ENST00000474193 IGBP1P78318 339 aa21.11■□□□□ 0.97
CCDC171-206ENST00000474193 PRR16Q569H4 304 aa21.11■□□□□ 0.97
CCDC171-206ENST00000474193 WNT8BQ93098 351 aa21.11■□□□□ 0.97
CCDC171-206ENST00000474193 WDR5P61964 334 aaKnown RBP21.1■□□□□ 0.97
CCDC171-206ENST00000474193 ADAM17P78536 824 aa21.1■□□□□ 0.97
CCDC171-206ENST00000474193 ITGB3BPQ13352 177 aaPredicted RBP21.1■□□□□ 0.97
CCDC171-206ENST00000474193 CCDC83Q8IWF9 413 aa21.1■□□□□ 0.97
CCDC171-206ENST00000474193 DBF4BQ8NFT6 615 aa21.1■□□□□ 0.97
CCDC171-206ENST00000474193 RASGRP4Q8TDF6 673 aa21.1■□□□□ 0.97
CCDC171-206ENST00000474193 CRYGNQ8WXF5 182 aa21.1■□□□□ 0.97
CCDC171-206ENST00000474193 WASF1Q92558 559 aa21.1■□□□□ 0.97
CCDC171-206ENST00000474193 YBX2Q9Y2T7 364 aaKnown RBP21.1■□□□□ 0.97
CCDC171-206ENST00000474193 MYO9BQ13459 2157 aa21.09■□□□□ 0.97
CCDC171-206ENST00000474193 POTEB3A0JP26 581 aa21.09■□□□□ 0.97
CCDC171-206ENST00000474193 M0QZ92 97 aa21.09■□□□□ 0.97
CCDC171-206ENST00000474193 ATG7O95352 703 aa21.09■□□□□ 0.97
CCDC171-206ENST00000474193 AMHP03971 560 aa21.09■□□□□ 0.97
CCDC171-206ENST00000474193 INSRRP14616 1297 aa21.09■□□□□ 0.97
CCDC171-206ENST00000474193 CIITAP33076 1130 aa21.09■□□□□ 0.97
CCDC171-206ENST00000474193 KRT76Q01546 638 aa21.09■□□□□ 0.97
CCDC171-206ENST00000474193 GPNMBQ14956 572 aa21.09■□□□□ 0.97
CCDC171-206ENST00000474193 POTEBQ6S5H4 581 aa21.09■□□□□ 0.97
CCDC171-206ENST00000474193 RPAINQ86UA6 219 aa21.09■□□□□ 0.97
CCDC171-206ENST00000474193 HSCBQ8IWL3 235 aa21.09■□□□□ 0.97
CCDC171-206ENST00000474193 BLIDQ8IZY5 108 aa21.09■□□□□ 0.97
CCDC171-206ENST00000474193 TET1Q8NFU7 2136 aa21.09■□□□□ 0.97
CCDC171-206ENST00000474193 APBB2Q92870 758 aa21.09■□□□□ 0.97
CCDC171-206ENST00000474193 TMX3Q96JJ7 454 aa21.09■□□□□ 0.97
CCDC171-206ENST00000474193 LLPHQ9BRT6 129 aaKnown RBP21.09■□□□□ 0.97
CCDC171-206ENST00000474193 PRDM12Q9H4Q4 367 aa21.09■□□□□ 0.97
CCDC171-206ENST00000474193 ZNF302Q9NR11 478 aa21.09■□□□□ 0.97
CCDC171-206ENST00000474193 SAMM50Q9Y512 469 aa21.09■□□□□ 0.97
CCDC171-206ENST00000474193 IGLV3-22A0A075B6J6 115 aa21.08■□□□□ 0.97
CCDC171-206ENST00000474193 HBP1O60381 514 aa21.08■□□□□ 0.97
CCDC171-206ENST00000474193 CD2BP2O95400 341 aaKnown RBP21.08■□□□□ 0.97
CCDC171-206ENST00000474193 PSAPP07602 524 aa21.08■□□□□ 0.97
CCDC171-206ENST00000474193 IGFBP4P22692 258 aa21.08■□□□□ 0.97
CCDC171-206ENST00000474193 PLEKHG4Q58EX7 1191 aa21.08■□□□□ 0.97
CCDC171-206ENST00000474193 IER5Q5VY09 327 aa21.08■□□□□ 0.97
CCDC171-206ENST00000474193 ZNF746Q6NUN9 644 aaPredicted RBP21.08■□□□□ 0.97
CCDC171-206ENST00000474193 PDXDC2PQ6P474 469 aa21.08■□□□□ 0.97
CCDC171-206ENST00000474193 TRAF7Q6Q0C0 670 aa21.08■□□□□ 0.97
CCDC171-206ENST00000474193 CKAP2LQ8IYA6 745 aa21.08■□□□□ 0.97
CCDC171-206ENST00000474193 SMAP1Q8IYB5 467 aaPredicted RBP21.08■□□□□ 0.97
CCDC171-206ENST00000474193 LAMA2P24043 3122 aaKnown RBP21.08■□□□□ 0.96
CCDC171-206ENST00000474193 CA3P07451 260 aa21.07■□□□□ 0.96
CCDC171-206ENST00000474193 MYOGP15173 224 aa21.07■□□□□ 0.96
CCDC171-206ENST00000474193 MBTPS1Q14703 1052 aa21.07■□□□□ 0.96
CCDC171-206ENST00000474193 PLCB4Q15147 1175 aa21.07■□□□□ 0.96
CCDC171-206ENST00000474193 FAM26DQ5JW98 314 aa21.07■□□□□ 0.96
CCDC171-206ENST00000474193 SWSAP1Q6NVH7 229 aa21.07■□□□□ 0.96
CCDC171-206ENST00000474193 ABHD15Q6UXT9 468 aa21.07■□□□□ 0.96
CCDC171-206ENST00000474193 TBCKQ8TEA7 893 aa21.07■□□□□ 0.96
CCDC171-206ENST00000474193 SNX21Q969T3 373 aa21.07■□□□□ 0.96
CCDC171-206ENST00000474193 PCYT2Q99447 389 aa21.07■□□□□ 0.96
CCDC171-206ENST00000474193 RAD9AQ99638 391 aa21.07■□□□□ 0.96
CCDC171-206ENST00000474193 PCDHA10Q9Y5I2 948 aa21.07■□□□□ 0.96
CCDC171-206ENST00000474193 MBLAC1A4D2B0 266 aaPredicted RBP21.06■□□□□ 0.96
CCDC171-206ENST00000474193 NONOQ15233 471 aaKnown RBP eCLIP21.06■□□□□ 0.96
CCDC171-206ENST00000474193 KRT25Q7Z3Z0 450 aa21.06■□□□□ 0.96
CCDC171-206ENST00000474193 NME8Q8N427 588 aa21.06■□□□□ 0.96
CCDC171-206ENST00000474193 DAGLBQ8NCG7 672 aa21.06■□□□□ 0.96
CCDC171-206ENST00000474193 DNAJB3Q8WWF6 145 aa21.06■□□□□ 0.96
CCDC171-206ENST00000474193 ORC3Q9UBD5 711 aaPredicted RBP21.06■□□□□ 0.96
CCDC171-206ENST00000474193 STK36Q9NRP7 1315 aa21.05■□□□□ 0.96
CCDC171-206ENST00000474193 IGKV6D-21A0A0A0MT36 114 aa21.05■□□□□ 0.96
CCDC171-206ENST00000474193 CCDC194A0A1B0GVG4 234 aa21.05■□□□□ 0.96
CCDC171-206ENST00000474193 K7ELQ4 463 aaPredicted RBP21.05■□□□□ 0.96
CCDC171-206ENST00000474193 DHX15O43143 795 aaKnown RBP21.05■□□□□ 0.96
CCDC171-206ENST00000474193 GTPBP6O43824 516 aaPredicted RBP21.05■□□□□ 0.96
CCDC171-206ENST00000474193 GAS7O60861 476 aa21.05■□□□□ 0.96
CCDC171-206ENST00000474193 CCNE2O96020 404 aa21.05■□□□□ 0.96
CCDC171-206ENST00000474193 HMGN5P82970 282 aaKnown RBP21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms