RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 EPHA7Q15375 998 aa6.91□□□□□ -1.3
CLK1-210ENST00000473565 ZC2HC1CQ53FD0 456 aaPredicted RBP6.91□□□□□ -1.3
CLK1-210ENST00000473565 UTP14CQ5TAP6 766 aaKnown RBP6.91□□□□□ -1.3
CLK1-210ENST00000473565 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.91□□□□□ -1.3
CLK1-210ENST00000473565 LRRC55Q6ZSA7 311 aa6.91□□□□□ -1.3
CLK1-210ENST00000473565 VSIG10LQ86VR7 867 aa6.91□□□□□ -1.3
CLK1-210ENST00000473565 PPFIBP1Q86W92 1011 aa6.91□□□□□ -1.3
CLK1-210ENST00000473565 ERO1BQ86YB8 467 aa6.91□□□□□ -1.3
CLK1-210ENST00000473565 CCAR2Q8N163 923 aaKnown RBP6.91□□□□□ -1.3
CLK1-210ENST00000473565 ANKRD35Q8N283 1001 aa6.91□□□□□ -1.3
CLK1-210ENST00000473565 ANKRD20A12PQ8NF67 263 aa6.91□□□□□ -1.3
CLK1-210ENST00000473565 RBM46Q8TBY0 533 aaKnown RBP6.91□□□□□ -1.3
CLK1-210ENST00000473565 ASCC2Q9H1I8 757 aaPredicted RBP6.91□□□□□ -1.3
CLK1-210ENST00000473565 TXNRD2Q9NNW7 524 aa6.91□□□□□ -1.3
CLK1-210ENST00000473565 TUFT1Q9NNX1 390 aa6.91□□□□□ -1.3
CLK1-210ENST00000473565 A0A0G2JLL6 359 aaPredicted RBP6.9□□□□□ -1.3
CLK1-210ENST00000473565 A0A0U1RQJ8 604 aa6.9□□□□□ -1.3
CLK1-210ENST00000473565 FRMD3A2A2Y4 597 aa6.9□□□□□ -1.3
CLK1-210ENST00000473565 SOWAHDA6NJG2 315 aa6.9□□□□□ -1.3
CLK1-210ENST00000473565 LGALS16A8MUM7 142 aa6.9□□□□□ -1.3
CLK1-210ENST00000473565 TBCAO75347 108 aaKnown RBP6.9□□□□□ -1.3
CLK1-210ENST00000473565 ECM2O94769 699 aaPredicted RBP6.9□□□□□ -1.3
CLK1-210ENST00000473565 EEF1GP26641 437 aaKnown RBP6.9□□□□□ -1.3
CLK1-210ENST00000473565 IRX3P78415 501 aaPredicted RBP6.9□□□□□ -1.3
CLK1-210ENST00000473565 MIIPQ5JXC2 388 aa6.9□□□□□ -1.3
CLK1-210ENST00000473565 PLA2G4FQ68DD2 849 aa6.9□□□□□ -1.3
CLK1-210ENST00000473565 LBX2Q6XYB7 198 aa6.9□□□□□ -1.3
CLK1-210ENST00000473565 TOGARAM2Q6ZUX3 1019 aa6.9□□□□□ -1.3
CLK1-210ENST00000473565 EEPD1Q7L9B9 569 aa6.9□□□□□ -1.3
CLK1-210ENST00000473565 PRRT2Q7Z6L0 340 aaPredicted RBP6.9□□□□□ -1.3
CLK1-210ENST00000473565 MB21D1Q8N884 522 aa6.9□□□□□ -1.3
CLK1-210ENST00000473565 ATRIPQ8WXE1 791 aa6.9□□□□□ -1.3
CLK1-210ENST00000473565 ZNF592Q92610 1267 aa6.9□□□□□ -1.3
CLK1-210ENST00000473565 RIT2Q99578 217 aa6.9□□□□□ -1.3
CLK1-210ENST00000473565 BAG1Q99933 345 aaPredicted RBP6.9□□□□□ -1.3
CLK1-210ENST00000473565 MYH11P35749 1972 aa6.9□□□□□ -1.3
CLK1-210ENST00000473565 SPDYE5A6NIY4 337 aa6.9□□□□□ -1.31
CLK1-210ENST00000473565 AKR1B15C9JRZ8 316 aaPredicted RBP6.9□□□□□ -1.31
CLK1-210ENST00000473565 GCNT3O95395 438 aa6.9□□□□□ -1.31
CLK1-210ENST00000473565 PGK2P07205 417 aa6.9□□□□□ -1.31
CLK1-210ENST00000473565 FDX1P10109 184 aa6.9□□□□□ -1.31
CLK1-210ENST00000473565 BCRP11274 1271 aa6.9□□□□□ -1.31
CLK1-210ENST00000473565 CCND2P30279 289 aa6.9□□□□□ -1.31
CLK1-210ENST00000473565 OAZ1P54368 228 aa6.9□□□□□ -1.31
CLK1-210ENST00000473565 PPATQ06203 517 aa6.9□□□□□ -1.31
CLK1-210ENST00000473565 PSMD2Q13200 908 aa6.9□□□□□ -1.31
CLK1-210ENST00000473565 SYCP1Q15431 976 aa6.9□□□□□ -1.31
CLK1-210ENST00000473565 ZCWPW2Q504Y3 356 aa6.9□□□□□ -1.31
CLK1-210ENST00000473565 WDR78Q5VTH9 848 aa6.9□□□□□ -1.31
CLK1-210ENST00000473565 C1orf186Q6ZWK4 172 aa6.9□□□□□ -1.31
CLK1-210ENST00000473565 MYCT1Q8N699 235 aa6.9□□□□□ -1.31
CLK1-210ENST00000473565 ZNF507Q8TCN5 953 aa6.9□□□□□ -1.31
CLK1-210ENST00000473565 NOC4LQ9BVI4 516 aaKnown RBP6.9□□□□□ -1.31
CLK1-210ENST00000473565 TMX1Q9H3N1 280 aa6.9□□□□□ -1.31
CLK1-210ENST00000473565 MRPL44Q9H9J2 332 aaKnown RBP6.9□□□□□ -1.31
CLK1-210ENST00000473565 MFAP3LO75121 409 aa6.89□□□□□ -1.31
CLK1-210ENST00000473565 FAM13AO94988 1023 aa6.89□□□□□ -1.31
CLK1-210ENST00000473565 CYP2C8P10632 490 aa6.89□□□□□ -1.31
CLK1-210ENST00000473565 NPEPPSP55786 919 aa6.89□□□□□ -1.31
CLK1-210ENST00000473565 SOX10P56693 466 aa6.89□□□□□ -1.31
CLK1-210ENST00000473565 HERVK_113P62684 666 aa6.89□□□□□ -1.31
CLK1-210ENST00000473565 APBA1Q02410 837 aa6.89□□□□□ -1.31
CLK1-210ENST00000473565 MOGSQ13724 837 aa6.89□□□□□ -1.31
CLK1-210ENST00000473565 Q3C1V9 767 aa6.89□□□□□ -1.31
CLK1-210ENST00000473565 SEPT14Q6ZU15 432 aa6.89□□□□□ -1.31
CLK1-210ENST00000473565 NSUN6Q8TEA1 469 aaKnown RBP6.89□□□□□ -1.31
CLK1-210ENST00000473565 ZNF526Q8TF50 670 aaPredicted RBP6.89□□□□□ -1.31
CLK1-210ENST00000473565 PPP1R13BQ96KQ4 1090 aa6.89□□□□□ -1.31
CLK1-210ENST00000473565 PCMTD1Q96MG8 357 aaPredicted RBP6.89□□□□□ -1.31
CLK1-210ENST00000473565 SPATC1LQ9H0A9 340 aa6.89□□□□□ -1.31
CLK1-210ENST00000473565 KCTD10Q9H3F6 313 aa6.89□□□□□ -1.31
CLK1-210ENST00000473565 GPRC5CQ9NQ84 441 aa6.89□□□□□ -1.31
CLK1-210ENST00000473565 TTC26A0AVF1 554 aa6.89□□□□□ -1.31
CLK1-210ENST00000473565 ARHGEF35A5YM69 484 aa6.89□□□□□ -1.31
CLK1-210ENST00000473565 RASSF10A6NK89 507 aa6.89□□□□□ -1.31
CLK1-210ENST00000473565 ATP2A1O14983 1001 aa6.89□□□□□ -1.31
CLK1-210ENST00000473565 CLIC2O15247 247 aa6.89□□□□□ -1.31
CLK1-210ENST00000473565 USO1O60763 962 aaKnown RBP6.89□□□□□ -1.31
CLK1-210ENST00000473565 CNMDO75829 334 aa6.89□□□□□ -1.31
CLK1-210ENST00000473565 TNNT1P13805 278 aa6.89□□□□□ -1.31
CLK1-210ENST00000473565 SP2Q02086 613 aa6.89□□□□□ -1.31
CLK1-210ENST00000473565 TBC1D8BQ0IIM8 1120 aa6.89□□□□□ -1.31
CLK1-210ENST00000473565 COBLL1Q53SF7 1204 aa6.89□□□□□ -1.31
CLK1-210ENST00000473565 PADI6Q6TGC4 694 aa6.89□□□□□ -1.31
CLK1-210ENST00000473565 RAD9BQ6WBX8 426 aa6.89□□□□□ -1.31
CLK1-210ENST00000473565 TEX2Q8IWB9 1127 aa6.89□□□□□ -1.31
CLK1-210ENST00000473565 DAW1Q8N136 415 aa6.89□□□□□ -1.31
CLK1-210ENST00000473565 SMCR8Q8TEV9 937 aaPredicted RBP6.89□□□□□ -1.31
CLK1-210ENST00000473565 ZC3H15Q8WU90 426 aaKnown RBP6.89□□□□□ -1.31
CLK1-210ENST00000473565 NACC1Q96RE7 527 aa6.89□□□□□ -1.31
CLK1-210ENST00000473565 MOV10L1Q9BXT6 1211 aaKnown RBP6.89□□□□□ -1.31
CLK1-210ENST00000473565 TCEAL9Q9UHQ7 104 aa6.89□□□□□ -1.31
CLK1-210ENST00000473565 LOC285556D6RIA3 1793 aa6.89□□□□□ -1.31
CLK1-210ENST00000473565 WDR81Q562E7 1941 aa6.89□□□□□ -1.31
CLK1-210ENST00000473565 MCM3APO60318 1980 aa6.89□□□□□ -1.31
CLK1-210ENST00000473565 BACH1O14867 736 aa6.89□□□□□ -1.31
CLK1-210ENST00000473565 EPHB6O15197 1021 aa6.89□□□□□ -1.31
CLK1-210ENST00000473565 HIP1RO75146 1068 aa6.89□□□□□ -1.31
CLK1-210ENST00000473565 P4HBP07237 508 aaKnown RBP6.89□□□□□ -1.31
CLK1-210ENST00000473565 LRRC63Q05C16 580 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms