RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 HEATR3Q7Z4Q2 680 aa15.48■□□□□ 0.07
CHD3-209ENST00000473376 MICU3Q86XE3 530 aa15.48■□□□□ 0.07
CHD3-209ENST00000473376 CMTR1Q8N1G2 835 aaKnown RBP15.48■□□□□ 0.07
CHD3-209ENST00000473376 CLP1Q92989 425 aaKnown RBP15.48■□□□□ 0.07
CHD3-209ENST00000473376 SDF4Q9BRK5 362 aa15.48■□□□□ 0.07
CHD3-209ENST00000473376 PLVAPQ9BX97 442 aa15.48■□□□□ 0.07
CHD3-209ENST00000473376 UBE2ZQ9H832 354 aaPredicted RBP15.48■□□□□ 0.07
CHD3-209ENST00000473376 RC3H2Q9HBD1 1191 aaKnown RBP15.48■□□□□ 0.07
CHD3-209ENST00000473376 BARHL2Q9NY43 387 aa15.48■□□□□ 0.07
CHD3-209ENST00000473376 CNTNAP5Q8WYK1 1306 aa15.47■□□□□ 0.07
CHD3-209ENST00000473376 KDM3AQ9Y4C1 1321 aa15.47■□□□□ 0.07
CHD3-209ENST00000473376 IGKV6D-21A0A0A0MT36 114 aa15.47■□□□□ 0.07
CHD3-209ENST00000473376 ENPP3O14638 875 aa15.47■□□□□ 0.07
CHD3-209ENST00000473376 RXRAP19793 462 aa15.47■□□□□ 0.07
CHD3-209ENST00000473376 SREBF1P36956 1147 aa15.47■□□□□ 0.07
CHD3-209ENST00000473376 CLK2P49760 499 aaKnown RBP15.47■□□□□ 0.07
CHD3-209ENST00000473376 NAPAP54920 295 aa15.47■□□□□ 0.07
CHD3-209ENST00000473376 LPIN1Q14693 890 aa15.47■□□□□ 0.07
CHD3-209ENST00000473376 RTN1Q16799 776 aa15.47■□□□□ 0.07
CHD3-209ENST00000473376 NAALADL2Q58DX5 795 aa15.47■□□□□ 0.07
CHD3-209ENST00000473376 FBXO47Q5MNV8 452 aa15.47■□□□□ 0.07
CHD3-209ENST00000473376 WWC2Q6AWC2 1192 aa15.47■□□□□ 0.07
CHD3-209ENST00000473376 FAM117BQ6P1L5 589 aa15.47■□□□□ 0.07
CHD3-209ENST00000473376 FIBCD1Q8N539 461 aa15.47■□□□□ 0.07
CHD3-209ENST00000473376 NEK9Q8TD19 979 aa15.47■□□□□ 0.07
CHD3-209ENST00000473376 RNF216Q9NWF9 866 aaPredicted RBP15.47■□□□□ 0.07
CHD3-209ENST00000473376 MTUS1Q9ULD2 1270 aa15.47■□□□□ 0.07
CHD3-209ENST00000473376 TELO2Q9Y4R8 837 aa15.47■□□□□ 0.07
CHD3-209ENST00000473376 PCDHA2Q9Y5H9 948 aa15.47■□□□□ 0.07
CHD3-209ENST00000473376 ESYT2A0FGR8 921 aa15.46■□□□□ 0.07
CHD3-209ENST00000473376 INSRRP14616 1297 aa15.46■□□□□ 0.07
CHD3-209ENST00000473376 BMPR1AP36894 532 aa15.46■□□□□ 0.07
CHD3-209ENST00000473376 ADCY7P51828 1080 aa15.46■□□□□ 0.07
CHD3-209ENST00000473376 MRPS6P82932 125 aaKnown RBP15.46■□□□□ 0.07
CHD3-209ENST00000473376 SP4Q02446 784 aa15.46■□□□□ 0.07
CHD3-209ENST00000473376 GPM6BQ13491 265 aa15.46■□□□□ 0.07
CHD3-209ENST00000473376 UBE2SQ16763 222 aa15.46■□□□□ 0.07
CHD3-209ENST00000473376 RUFY4Q6ZNE9 571 aa15.46■□□□□ 0.07
CHD3-209ENST00000473376 CRIPAKQ8N1N5 446 aa15.46■□□□□ 0.07
CHD3-209ENST00000473376 CCDC82Q8N4S0 544 aa15.46■□□□□ 0.07
CHD3-209ENST00000473376 BANK1Q8NDB2 785 aa15.46■□□□□ 0.07
CHD3-209ENST00000473376 KCNB2Q92953 911 aa15.46■□□□□ 0.07
CHD3-209ENST00000473376 ZNF689Q96CS4 500 aaPredicted RBP15.46■□□□□ 0.07
CHD3-209ENST00000473376 PCYT2Q99447 389 aa15.46■□□□□ 0.07
CHD3-209ENST00000473376 C11orf84Q9BUA3 381 aaPredicted RBP15.46■□□□□ 0.07
CHD3-209ENST00000473376 FAM50BQ9Y247 325 aa15.46■□□□□ 0.07
CHD3-209ENST00000473376 COL4A4P53420 1690 aaPredicted RBP15.45■□□□□ 0.06
CHD3-209ENST00000473376 SMIM35A0A1B0GVV1 85 aa15.45■□□□□ 0.06
CHD3-209ENST00000473376 SMCO2A6NFE2 343 aa15.45■□□□□ 0.06
CHD3-209ENST00000473376 M0QZ92 97 aa15.45■□□□□ 0.06
CHD3-209ENST00000473376 STXBP3O00186 592 aa15.45■□□□□ 0.06
CHD3-209ENST00000473376 CYP3A4P08684 503 aa15.45■□□□□ 0.06
CHD3-209ENST00000473376 LINC00271P0C7V0 271 aa15.45■□□□□ 0.06
CHD3-209ENST00000473376 GHRP10912 638 aa15.45■□□□□ 0.06
CHD3-209ENST00000473376 STAT5BP51692 787 aa15.45■□□□□ 0.06
CHD3-209ENST00000473376 ACTR2P61160 394 aa15.45■□□□□ 0.06
CHD3-209ENST00000473376 IRX6P78412 446 aaPredicted RBP15.45■□□□□ 0.06
CHD3-209ENST00000473376 COL9A3Q14050 684 aaPredicted RBP15.45■□□□□ 0.06
CHD3-209ENST00000473376 ZNF710Q8N1W2 664 aa15.45■□□□□ 0.06
CHD3-209ENST00000473376 DNAJB3Q8WWF6 145 aa15.45■□□□□ 0.06
CHD3-209ENST00000473376 CRYGNQ8WXF5 182 aa15.45■□□□□ 0.06
CHD3-209ENST00000473376 P2RX5Q93086 422 aa15.45■□□□□ 0.06
CHD3-209ENST00000473376 PABPC5Q96DU9 382 aaKnown RBP15.45■□□□□ 0.06
CHD3-209ENST00000473376 NECAB3Q96P71 396 aaPredicted RBP15.45■□□□□ 0.06
CHD3-209ENST00000473376 LRRC2Q9BYS8 371 aa15.45■□□□□ 0.06
CHD3-209ENST00000473376 OSBPL7Q9BZF2 842 aa15.45■□□□□ 0.06
CHD3-209ENST00000473376 NSUN3Q9H649 340 aaKnown RBP15.45■□□□□ 0.06
CHD3-209ENST00000473376 AGO4Q9HCK5 861 aaKnown RBP15.45■□□□□ 0.06
CHD3-209ENST00000473376 V9GY48 417 aaPredicted RBP15.45■□□□□ 0.06
CHD3-209ENST00000473376 ADGRA3Q8IWK6 1321 aa15.44■□□□□ 0.06
CHD3-209ENST00000473376 IGSF9BQ9UPX0 1349 aa15.44■□□□□ 0.06
CHD3-209ENST00000473376 PI4K2BG5E9Z4 385 aa15.44■□□□□ 0.06
CHD3-209ENST00000473376 GPR37L1O60883 481 aa15.44■□□□□ 0.06
CHD3-209ENST00000473376 CDC45O75419 566 aa15.44■□□□□ 0.06
CHD3-209ENST00000473376 DGKIO75912 1065 aa15.44■□□□□ 0.06
CHD3-209ENST00000473376 UPP2O95045 317 aa15.44■□□□□ 0.06
CHD3-209ENST00000473376 ODR4Q5SWX8 454 aa15.44■□□□□ 0.06
CHD3-209ENST00000473376 TYW1BQ6NUM6 668 aa15.44■□□□□ 0.06
CHD3-209ENST00000473376 FAM178BQ8IXR5 827 aa15.44■□□□□ 0.06
CHD3-209ENST00000473376 CMTR2Q8IYT2 770 aaKnown RBP15.44■□□□□ 0.06
CHD3-209ENST00000473376 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.44■□□□□ 0.06
CHD3-209ENST00000473376 CCDC12Q8WUD4 166 aaPredicted RBP15.44■□□□□ 0.06
CHD3-209ENST00000473376 ANO3Q9BYT9 981 aa15.44■□□□□ 0.06
CHD3-209ENST00000473376 ZMYND12Q9H0C1 365 aa15.44■□□□□ 0.06
CHD3-209ENST00000473376 FAM217BQ9NTX9 383 aaPredicted RBP15.44■□□□□ 0.06
CHD3-209ENST00000473376 PRKAG3Q9UGI9 489 aa15.44■□□□□ 0.06
CHD3-209ENST00000473376 BRPF3Q9ULD4 1205 aa15.44■□□□□ 0.06
CHD3-209ENST00000473376 CDY2AQ9Y6F7 541 aa15.44■□□□□ 0.06
CHD3-209ENST00000473376 COL1A2P08123 1366 aa15.44■□□□□ 0.06
CHD3-209ENST00000473376 NID2Q14112 1375 aa15.44■□□□□ 0.06
CHD3-209ENST00000473376 KAT6AQ92794 2004 aa15.43■□□□□ 0.06
CHD3-209ENST00000473376 hCG_1642624A0A1W2PR95 340 aa15.43■□□□□ 0.06
CHD3-209ENST00000473376 POTEB3A0JP26 581 aa15.43■□□□□ 0.06
CHD3-209ENST00000473376 GRXCR2A6NFK2 248 aa15.43■□□□□ 0.06
CHD3-209ENST00000473376 EPB41L2O43491 1005 aaKnown RBP15.43■□□□□ 0.06
CHD3-209ENST00000473376 HBP1O60381 514 aa15.43■□□□□ 0.06
CHD3-209ENST00000473376 STAG3L1P0CL83 205 aa15.43■□□□□ 0.06
CHD3-209ENST00000473376 MARK3P27448 753 aa15.43■□□□□ 0.06
CHD3-209ENST00000473376 PLCB4Q15147 1175 aa15.43■□□□□ 0.06
CHD3-209ENST00000473376 PFKFB3Q16875 520 aaPredicted RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms