RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 WNT8BQ93098 351 aa22.06■■□□□ 1.12
COMMD1-208ENST00000472729 VWCEQ96DN2 955 aa22.06■■□□□ 1.12
COMMD1-208ENST00000472729 TPCN1Q9ULQ1 816 aa22.06■■□□□ 1.12
COMMD1-208ENST00000472729 M0QZ92 97 aa22.05■■□□□ 1.12
COMMD1-208ENST00000472729 USP11P51784 963 aa22.05■■□□□ 1.12
COMMD1-208ENST00000472729 NEK4P51957 841 aa22.05■■□□□ 1.12
COMMD1-208ENST00000472729 AK2P54819 239 aa22.05■■□□□ 1.12
COMMD1-208ENST00000472729 SCRN1Q12765 414 aa22.05■■□□□ 1.12
COMMD1-208ENST00000472729 BLIDQ8IZY5 108 aa22.05■■□□□ 1.12
COMMD1-208ENST00000472729 MAFAQ8NHW3 353 aaPredicted RBP22.05■■□□□ 1.12
COMMD1-208ENST00000472729 POTEB3A0JP26 581 aa22.04■■□□□ 1.12
COMMD1-208ENST00000472729 PFKFB2O60825 505 aa22.04■■□□□ 1.12
COMMD1-208ENST00000472729 AMHP03971 560 aa22.04■■□□□ 1.12
COMMD1-208ENST00000472729 INSRRP14616 1297 aa22.04■■□□□ 1.12
COMMD1-208ENST00000472729 WDR5P61964 334 aaKnown RBP22.04■■□□□ 1.12
COMMD1-208ENST00000472729 PDXDC2PQ6P474 469 aa22.04■■□□□ 1.12
COMMD1-208ENST00000472729 POTEBQ6S5H4 581 aa22.04■■□□□ 1.12
COMMD1-208ENST00000472729 UIMC1Q96RL1 719 aa22.04■■□□□ 1.12
COMMD1-208ENST00000472729 PRDM12Q9H4Q4 367 aa22.04■■□□□ 1.12
COMMD1-208ENST00000472729 ZNF302Q9NR11 478 aa22.04■■□□□ 1.12
COMMD1-208ENST00000472729 YBX2Q9Y2T7 364 aaKnown RBP22.04■■□□□ 1.12
COMMD1-208ENST00000472729 IGLV3-22A0A075B6J6 115 aa22.03■■□□□ 1.12
COMMD1-208ENST00000472729 PSAPP07602 524 aa22.03■■□□□ 1.12
COMMD1-208ENST00000472729 MYOGP15173 224 aa22.03■■□□□ 1.12
COMMD1-208ENST00000472729 IGFBP4P22692 258 aa22.03■■□□□ 1.12
COMMD1-208ENST00000472729 KRT76Q01546 638 aa22.03■■□□□ 1.12
COMMD1-208ENST00000472729 ZNF746Q6NUN9 644 aaPredicted RBP22.03■■□□□ 1.12
COMMD1-208ENST00000472729 SWSAP1Q6NVH7 229 aa22.03■■□□□ 1.12
COMMD1-208ENST00000472729 SMAP1Q8IYB5 467 aaPredicted RBP22.03■■□□□ 1.12
COMMD1-208ENST00000472729 DBF4BQ8NFT6 615 aa22.03■■□□□ 1.12
COMMD1-208ENST00000472729 TBCKQ8TEA7 893 aa22.03■■□□□ 1.12
COMMD1-208ENST00000472729 BRMS1Q9HCU9 246 aa22.03■■□□□ 1.12
COMMD1-208ENST00000472729 CA3P07451 260 aa22.02■■□□□ 1.12
COMMD1-208ENST00000472729 CIITAP33076 1130 aa22.02■■□□□ 1.12
COMMD1-208ENST00000472729 GPNMBQ14956 572 aa22.02■■□□□ 1.12
COMMD1-208ENST00000472729 PLCB4Q15147 1175 aa22.02■■□□□ 1.12
COMMD1-208ENST00000472729 IER5Q5VY09 327 aa22.02■■□□□ 1.12
COMMD1-208ENST00000472729 KRT25Q7Z3Z0 450 aa22.02■■□□□ 1.12
COMMD1-208ENST00000472729 CRYGNQ8WXF5 182 aa22.02■■□□□ 1.12
COMMD1-208ENST00000472729 APBB2Q92870 758 aa22.02■■□□□ 1.12
COMMD1-208ENST00000472729 FAM49AQ9H0Q0 323 aaPredicted RBP22.02■■□□□ 1.12
COMMD1-208ENST00000472729 PCDHA10Q9Y5I2 948 aa22.02■■□□□ 1.12
COMMD1-208ENST00000472729 CCDC194A0A1B0GVG4 234 aa22.01■■□□□ 1.11
COMMD1-208ENST00000472729 GAS7O60861 476 aa22.01■■□□□ 1.11
COMMD1-208ENST00000472729 ATG7O95352 703 aa22.01■■□□□ 1.11
COMMD1-208ENST00000472729 CCNE2O96020 404 aa22.01■■□□□ 1.11
COMMD1-208ENST00000472729 ADAM17P78536 824 aa22.01■■□□□ 1.11
COMMD1-208ENST00000472729 MBTPS1Q14703 1052 aa22.01■■□□□ 1.11
COMMD1-208ENST00000472729 NONOQ15233 471 aaKnown RBP eCLIP22.01■■□□□ 1.11
COMMD1-208ENST00000472729 TRAF7Q6Q0C0 670 aa22.01■■□□□ 1.11
COMMD1-208ENST00000472729 ABHD15Q6UXT9 468 aa22.01■■□□□ 1.11
COMMD1-208ENST00000472729 DNAJB3Q8WWF6 145 aa22.01■■□□□ 1.11
COMMD1-208ENST00000472729 PCYT2Q99447 389 aa22.01■■□□□ 1.11
COMMD1-208ENST00000472729 ORC3Q9UBD5 711 aaPredicted RBP22.01■■□□□ 1.11
COMMD1-208ENST00000472729 WDR64B1ANS9 1081 aa22■■□□□ 1.11
COMMD1-208ENST00000472729 ADAMTS3O15072 1205 aa22■■□□□ 1.11
COMMD1-208ENST00000472729 MARCH6O60337 910 aa22■■□□□ 1.11
COMMD1-208ENST00000472729 HBP1O60381 514 aa22■■□□□ 1.11
COMMD1-208ENST00000472729 TRIM29Q14134 588 aa22■■□□□ 1.11
COMMD1-208ENST00000472729 PLEKHG4Q58EX7 1191 aa22■■□□□ 1.11
COMMD1-208ENST00000472729 FAM117BQ6P1L5 589 aa22■■□□□ 1.11
COMMD1-208ENST00000472729 RUFY4Q6ZNE9 571 aa22■■□□□ 1.11
COMMD1-208ENST00000472729 RPAINQ86UA6 219 aa22■■□□□ 1.11
COMMD1-208ENST00000472729 MYOCDQ8IZQ8 938 aa22■■□□□ 1.11
COMMD1-208ENST00000472729 DAGLBQ8NCG7 672 aa22■■□□□ 1.11
COMMD1-208ENST00000472729 IFIH1Q9BYX4 1025 aaKnown RBP22■■□□□ 1.11
COMMD1-208ENST00000472729 KCNJ14Q9UNX9 436 aa22■■□□□ 1.11
COMMD1-208ENST00000472729 STK36Q9NRP7 1315 aa22■■□□□ 1.11
COMMD1-208ENST00000472729 MBLAC1A4D2B0 266 aaPredicted RBP21.99■■□□□ 1.11
COMMD1-208ENST00000472729 DHX15O43143 795 aaKnown RBP21.99■■□□□ 1.11
COMMD1-208ENST00000472729 FAM26DQ5JW98 314 aa21.99■■□□□ 1.11
COMMD1-208ENST00000472729 LRCH2Q5VUJ6 765 aa21.99■■□□□ 1.11
COMMD1-208ENST00000472729 TRMT1LQ7Z2T5 733 aaKnown RBP21.99■■□□□ 1.11
COMMD1-208ENST00000472729 ATP8B4Q8TF62 1192 aa21.99■■□□□ 1.11
COMMD1-208ENST00000472729 AIFM3Q96NN9 605 aa21.99■■□□□ 1.11
COMMD1-208ENST00000472729 RIT2Q99578 217 aa21.99■■□□□ 1.11
COMMD1-208ENST00000472729 RAD9AQ99638 391 aa21.99■■□□□ 1.11
COMMD1-208ENST00000472729 TEKT3Q9BXF9 490 aa21.99■■□□□ 1.11
COMMD1-208ENST00000472729 IGKV6D-21A0A0A0MT36 114 aa21.98■■□□□ 1.11
COMMD1-208ENST00000472729 DEFB103AP81534 67 aa21.98■■□□□ 1.11
COMMD1-208ENST00000472729 ZNF484Q5JVG2 852 aa21.98■■□□□ 1.11
COMMD1-208ENST00000472729 MARCH8Q5T0T0 291 aa21.98■■□□□ 1.11
COMMD1-208ENST00000472729 NME8Q8N427 588 aa21.98■■□□□ 1.11
COMMD1-208ENST00000472729 NECAB1Q8N987 351 aa21.98■■□□□ 1.11
COMMD1-208ENST00000472729 PPM1EQ8WY54 764 aa21.98■■□□□ 1.11
COMMD1-208ENST00000472729 NAP1L4Q99733 375 aaKnown RBP21.98■■□□□ 1.11
COMMD1-208ENST00000472729 CEP131Q9UPN4 1083 aa21.98■■□□□ 1.11
COMMD1-208ENST00000472729 PCDHA2Q9Y5H9 948 aa21.98■■□□□ 1.11
COMMD1-208ENST00000472729 MSH4O15457 936 aa21.97■■□□□ 1.11
COMMD1-208ENST00000472729 CHMP2AO43633 222 aa21.97■■□□□ 1.11
COMMD1-208ENST00000472729 GTPBP6O43824 516 aaPredicted RBP21.97■■□□□ 1.11
COMMD1-208ENST00000472729 GJB5O95377 273 aa21.97■■□□□ 1.11
COMMD1-208ENST00000472729 GHRP10912 638 aa21.97■■□□□ 1.11
COMMD1-208ENST00000472729 SFNP31947 248 aa21.97■■□□□ 1.11
COMMD1-208ENST00000472729 JAK3P52333 1124 aa21.97■■□□□ 1.11
COMMD1-208ENST00000472729 MRPS6P82932 125 aaKnown RBP21.97■■□□□ 1.11
COMMD1-208ENST00000472729 LETM2Q2VYF4 491 aa21.97■■□□□ 1.11
COMMD1-208ENST00000472729 Q4G0T1 1027 aa21.97■■□□□ 1.11
COMMD1-208ENST00000472729 CCDC60Q8IWA6 550 aaPredicted RBP21.97■■□□□ 1.11
COMMD1-208ENST00000472729 BBXQ8WY36 941 aaPredicted RBP21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms