RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 ZKSCAN5Q9Y2L8 839 aa8.05□□□□□ -1.12
CLK1-209ENST00000472679 MMEP08473 750 aa8.04□□□□□ -1.12
CLK1-209ENST00000472679 POU3F3P20264 500 aaPredicted RBP8.04□□□□□ -1.12
CLK1-209ENST00000472679 SCNN1BP51168 640 aa8.04□□□□□ -1.12
CLK1-209ENST00000472679 HTRA3P83110 453 aa8.04□□□□□ -1.12
CLK1-209ENST00000472679 DBPQ10586 325 aaPredicted RBP8.04□□□□□ -1.12
CLK1-209ENST00000472679 ADAM9Q13443 819 aa8.04□□□□□ -1.12
CLK1-209ENST00000472679 SMAD4Q13485 552 aaKnown RBP8.04□□□□□ -1.12
CLK1-209ENST00000472679 KCNA10Q16322 511 aa8.04□□□□□ -1.12
CLK1-209ENST00000472679 PHF19Q5T6S3 580 aa8.04□□□□□ -1.12
CLK1-209ENST00000472679 RNF187Q5TA31 235 aaPredicted RBP8.04□□□□□ -1.12
CLK1-209ENST00000472679 CNKSR3Q6P9H4 555 aa8.04□□□□□ -1.12
CLK1-209ENST00000472679 DDX46Q7L014 1031 aaKnown RBP8.04□□□□□ -1.12
CLK1-209ENST00000472679 LINC00482Q8N8I6 264 aa8.04□□□□□ -1.12
CLK1-209ENST00000472679 SMC1BQ8NDV3 1235 aa8.04□□□□□ -1.12
CLK1-209ENST00000472679 PWWP2AQ96N64 755 aa8.04□□□□□ -1.12
CLK1-209ENST00000472679 C11orf84Q9BUA3 381 aaPredicted RBP8.04□□□□□ -1.12
CLK1-209ENST00000472679 SLC39A2Q9NP94 309 aa8.04□□□□□ -1.12
CLK1-209ENST00000472679 GAS7O60861 476 aa8.03□□□□□ -1.12
CLK1-209ENST00000472679 HIP1RO75146 1068 aa8.03□□□□□ -1.12
CLK1-209ENST00000472679 SLC9A1P19634 815 aa8.03□□□□□ -1.12
CLK1-209ENST00000472679 SOX5P35711 763 aa8.03□□□□□ -1.12
CLK1-209ENST00000472679 KIF11P52732 1056 aa8.03□□□□□ -1.12
CLK1-209ENST00000472679 STRN3Q13033 797 aa8.03□□□□□ -1.12
CLK1-209ENST00000472679 RTP5Q14D33 572 aa8.03□□□□□ -1.12
CLK1-209ENST00000472679 PKN1Q16512 942 aa8.03□□□□□ -1.12
CLK1-209ENST00000472679 CATSPEREQ5SY80 951 aa8.03□□□□□ -1.12
CLK1-209ENST00000472679 CILP2Q8IUL8 1156 aa8.03□□□□□ -1.12
CLK1-209ENST00000472679 KIAA1958Q8N8K9 716 aa8.03□□□□□ -1.12
CLK1-209ENST00000472679 OR2W6PQ8NHA6 318 aa8.03□□□□□ -1.12
CLK1-209ENST00000472679 FNIP1Q8TF40 1166 aa8.03□□□□□ -1.12
CLK1-209ENST00000472679 ZBTB8AQ96BR9 441 aa8.03□□□□□ -1.12
CLK1-209ENST00000472679 ZSWIM3Q96MP5 696 aa8.03□□□□□ -1.12
CLK1-209ENST00000472679 GPR101Q96P66 508 aaPredicted RBP8.03□□□□□ -1.12
CLK1-209ENST00000472679 PMF1-BGLAPU3KQ54 211 aa8.03□□□□□ -1.12
CLK1-209ENST00000472679 H7C1D1 291 aa8.02□□□□□ -1.13
CLK1-209ENST00000472679 CNGA1P29973 690 aa8.02□□□□□ -1.13
CLK1-209ENST00000472679 MC4RP32245 332 aa8.02□□□□□ -1.13
CLK1-209ENST00000472679 ADCYAP1R1P41586 468 aa8.02□□□□□ -1.13
CLK1-209ENST00000472679 PFKPQ01813 784 aa8.02□□□□□ -1.13
CLK1-209ENST00000472679 CC2D1AQ6P1N0 951 aaPredicted RBP8.02□□□□□ -1.13
CLK1-209ENST00000472679 AFAP1L2Q8N4X5 818 aa8.02□□□□□ -1.13
CLK1-209ENST00000472679 ASB15Q8WXK1 588 aa8.02□□□□□ -1.13
CLK1-209ENST00000472679 ELF4Q99607 663 aaPredicted RBP8.02□□□□□ -1.13
CLK1-209ENST00000472679 SPTLC3Q9NUV7 552 aa8.02□□□□□ -1.13
CLK1-209ENST00000472679 SPATA6Q9NWH7 488 aaPredicted RBP8.02□□□□□ -1.13
CLK1-209ENST00000472679 BTBD7Q9P203 1132 aa8.02□□□□□ -1.13
CLK1-209ENST00000472679 ZNF839A8K0R7 811 aa8.01□□□□□ -1.13
CLK1-209ENST00000472679 FOXP2O15409 715 aa8.01□□□□□ -1.13
CLK1-209ENST00000472679 ENO2P09104 434 aaPredicted RBP8.01□□□□□ -1.13
CLK1-209ENST00000472679 PTX3P26022 381 aaPredicted RBP8.01□□□□□ -1.13
CLK1-209ENST00000472679 SDHAP31040 664 aa8.01□□□□□ -1.13
CLK1-209ENST00000472679 ID4P47928 161 aa8.01□□□□□ -1.13
CLK1-209ENST00000472679 HERVK_113P62684 666 aa8.01□□□□□ -1.13
CLK1-209ENST00000472679 DLX2Q07687 328 aaPredicted RBP8.01□□□□□ -1.13
CLK1-209ENST00000472679 DHCR24Q15392 516 aa8.01□□□□□ -1.13
CLK1-209ENST00000472679 VASNQ6EMK4 673 aa8.01□□□□□ -1.13
CLK1-209ENST00000472679 DTX3Q8N9I9 347 aa8.01□□□□□ -1.13
CLK1-209ENST00000472679 KYQ8NBH2 561 aa8.01□□□□□ -1.13
CLK1-209ENST00000472679 DACT3Q96B18 629 aaPredicted RBP8.01□□□□□ -1.13
CLK1-209ENST00000472679 ANKRD62A6NC57 917 aa8□□□□□ -1.13
CLK1-209ENST00000472679 NEMP1O14524 444 aa8□□□□□ -1.13
CLK1-209ENST00000472679 TGM5O43548 720 aa8□□□□□ -1.13
CLK1-209ENST00000472679 FKBP9O95302 570 aa8□□□□□ -1.13
CLK1-209ENST00000472679 BPIP17213 487 aa8□□□□□ -1.13
CLK1-209ENST00000472679 CANXP27824 592 aaKnown RBP8□□□□□ -1.13
CLK1-209ENST00000472679 AOAHP28039 575 aa8□□□□□ -1.13
CLK1-209ENST00000472679 IL2P60568 153 aa8□□□□□ -1.13
CLK1-209ENST00000472679 SKIDA1Q1XH10 827 aa8□□□□□ -1.13
CLK1-209ENST00000472679 CT47A1Q5JQC4 288 aaPredicted RBP8□□□□□ -1.13
CLK1-209ENST00000472679 FKBP9P1Q75LS8 142 aa8□□□□□ -1.13
CLK1-209ENST00000472679 GBP4Q96PP9 640 aa8□□□□□ -1.13
CLK1-209ENST00000472679 TMEM209Q96SK2 561 aa8□□□□□ -1.13
CLK1-209ENST00000472679 PCIF1Q9H4Z3 704 aa8□□□□□ -1.13
CLK1-209ENST00000472679 PCDH18Q9HCL0 1135 aa8□□□□□ -1.13
CLK1-209ENST00000472679 MPIG6BO95866 241 aa7.99□□□□□ -1.13
CLK1-209ENST00000472679 GLRBP48167 497 aa7.99□□□□□ -1.13
CLK1-209ENST00000472679 KPNA1P52294 538 aaPredicted RBP7.99□□□□□ -1.13
CLK1-209ENST00000472679 NFKB2Q00653 900 aa7.99□□□□□ -1.13
CLK1-209ENST00000472679 SART3Q15020 963 aaKnown RBP7.99□□□□□ -1.13
CLK1-209ENST00000472679 ZNF174Q15697 407 aa7.99□□□□□ -1.13
CLK1-209ENST00000472679 VMACQ2NL98 169 aa7.99□□□□□ -1.13
CLK1-209ENST00000472679 VWA3BQ502W6 1294 aa7.99□□□□□ -1.13
CLK1-209ENST00000472679 ZNF385BQ569K4 471 aa7.99□□□□□ -1.13
CLK1-209ENST00000472679 ADGRG2Q8IZP9 1017 aa7.99□□□□□ -1.13
CLK1-209ENST00000472679 ZNF526Q8TF50 670 aaPredicted RBP7.99□□□□□ -1.13
CLK1-209ENST00000472679 USP7Q93009 1102 aa7.99□□□□□ -1.13
CLK1-209ENST00000472679 IRF2BPLQ9H1B7 796 aa7.99□□□□□ -1.13
CLK1-209ENST00000472679 TMX1Q9H3N1 280 aa7.99□□□□□ -1.13
CLK1-209ENST00000472679 ACSS2Q9NR19 701 aa7.99□□□□□ -1.13
CLK1-209ENST00000472679 UCKL1Q9NWZ5 548 aa7.99□□□□□ -1.13
CLK1-209ENST00000472679 ARHGAP28Q9P2N2 729 aa7.99□□□□□ -1.13
CLK1-209ENST00000472679 SPO11Q9Y5K1 396 aa7.99□□□□□ -1.13
CLK1-209ENST00000472679 PRAMEF22A3QJZ6 481 aa7.98□□□□□ -1.13
CLK1-209ENST00000472679 RFXAPO00287 272 aa7.98□□□□□ -1.13
CLK1-209ENST00000472679 FFAR3O14843 346 aa7.98□□□□□ -1.13
CLK1-209ENST00000472679 EYA4O95677 639 aa7.98□□□□□ -1.13
CLK1-209ENST00000472679 IL18BPO95998 194 aa7.98□□□□□ -1.13
CLK1-209ENST00000472679 PTGS1P23219 599 aa7.98□□□□□ -1.13
CLK1-209ENST00000472679 LSSP48449 732 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms