RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 CARD6Q9BX69 1037 aa7.12□□□□□ -1.27
SPEN-204ENST00000471538 DEFB129Q9H1M3 183 aa7.12□□□□□ -1.27
SPEN-204ENST00000471538 KCTD10Q9H3F6 313 aa7.12□□□□□ -1.27
SPEN-204ENST00000471538 ARHGEF10LQ9HCE6 1279 aa7.12□□□□□ -1.27
SPEN-204ENST00000471538 LZTFL1Q9NQ48 299 aa7.12□□□□□ -1.27
SPEN-204ENST00000471538 ZNF277Q9NRM2 450 aaPredicted RBP7.12□□□□□ -1.27
SPEN-204ENST00000471538 AGPAT5Q9NUQ2 364 aa7.12□□□□□ -1.27
SPEN-204ENST00000471538 PANK4Q9NVE7 773 aa7.12□□□□□ -1.27
SPEN-204ENST00000471538 TMOD2Q9NZR1 351 aa7.12□□□□□ -1.27
SPEN-204ENST00000471538 MYO1AQ9UBC5 1043 aa7.12□□□□□ -1.27
SPEN-204ENST00000471538 HDAC9Q9UKV0 1011 aa7.12□□□□□ -1.27
SPEN-204ENST00000471538 KIAA1024Q9UPX6 916 aa7.12□□□□□ -1.27
SPEN-204ENST00000471538 LUC7L2Q9Y383 392 aaKnown RBP7.12□□□□□ -1.27
SPEN-204ENST00000471538 EPN1Q9Y6I3 576 aaPredicted RBP7.12□□□□□ -1.27
SPEN-204ENST00000471538 SMCHD1A6NHR9 2005 aa7.12□□□□□ -1.27
SPEN-204ENST00000471538 PITPNM2Q9BZ72 1349 aa7.12□□□□□ -1.27
SPEN-204ENST00000471538 SPDYE3A6NKU9 549 aa7.11□□□□□ -1.27
SPEN-204ENST00000471538 KIF5CO60282 957 aa7.11□□□□□ -1.27
SPEN-204ENST00000471538 FGFR1OPO95684 399 aaKnown RBP7.11□□□□□ -1.27
SPEN-204ENST00000471538 IDEP14735 1019 aa7.11□□□□□ -1.27
SPEN-204ENST00000471538 MTIF2P46199 727 aaKnown RBP7.11□□□□□ -1.27
SPEN-204ENST00000471538 PPP2R3AQ06190 1150 aa7.11□□□□□ -1.27
SPEN-204ENST00000471538 LRRC41Q15345 812 aa7.11□□□□□ -1.27
SPEN-204ENST00000471538 PRR16Q569H4 304 aa7.11□□□□□ -1.27
SPEN-204ENST00000471538 FAM83BQ5T0W9 1011 aa7.11□□□□□ -1.27
SPEN-204ENST00000471538 HAUS3Q68CZ6 603 aa7.11□□□□□ -1.27
SPEN-204ENST00000471538 GPBP1Q86WP2 473 aa7.11□□□□□ -1.27
SPEN-204ENST00000471538 CREBRFQ8IUR6 639 aa7.11□□□□□ -1.27
SPEN-204ENST00000471538 CCDC65Q8IXS2 484 aa7.11□□□□□ -1.27
SPEN-204ENST00000471538 MYOCDQ8IZQ8 938 aa7.11□□□□□ -1.27
SPEN-204ENST00000471538 SPICE1Q8N0Z3 855 aa7.11□□□□□ -1.27
SPEN-204ENST00000471538 SLC35F6Q8N357 371 aa7.11□□□□□ -1.27
SPEN-204ENST00000471538 KCTD17Q8N5Z5 321 aa7.11□□□□□ -1.27
SPEN-204ENST00000471538 SYT2Q8N9I0 419 aaPredicted RBP7.11□□□□□ -1.27
SPEN-204ENST00000471538 SCFD1Q8WVM8 642 aa7.11□□□□□ -1.27
SPEN-204ENST00000471538 JDP2Q8WYK2 163 aa7.11□□□□□ -1.27
SPEN-204ENST00000471538 CEP63Q96MT8 703 aa7.11□□□□□ -1.27
SPEN-204ENST00000471538 FEZ1Q99689 392 aa7.11□□□□□ -1.27
SPEN-204ENST00000471538 SLF1Q9BQI6 1058 aa7.11□□□□□ -1.27
SPEN-204ENST00000471538 POLR3CQ9BUI4 534 aaPredicted RBP7.11□□□□□ -1.27
SPEN-204ENST00000471538 WDR18Q9BV38 432 aa7.11□□□□□ -1.27
SPEN-204ENST00000471538 NDST4Q9H3R1 872 aa7.11□□□□□ -1.27
SPEN-204ENST00000471538 VCPKMTQ9H867 229 aa7.11□□□□□ -1.27
SPEN-204ENST00000471538 GOPCQ9HD26 462 aa7.11□□□□□ -1.27
SPEN-204ENST00000471538 ZNF446Q9NWS9 450 aa7.11□□□□□ -1.27
SPEN-204ENST00000471538 DDX41Q9UJV9 622 aaKnown RBP7.11□□□□□ -1.27
SPEN-204ENST00000471538 ZNRF3Q9ULT6 936 aa7.11□□□□□ -1.27
SPEN-204ENST00000471538 CASP8AP2Q9UKL3 1982 aa7.11□□□□□ -1.27
SPEN-204ENST00000471538 NPHP3-ACAD11A0A0J9YXS1 232 aa7.1□□□□□ -1.27
SPEN-204ENST00000471538 EIF3CLB5ME19 914 aaKnown RBP7.1□□□□□ -1.27
SPEN-204ENST00000471538 EPHB6O15197 1021 aa7.1□□□□□ -1.27
SPEN-204ENST00000471538 MARCH6O60337 910 aa7.1□□□□□ -1.27
SPEN-204ENST00000471538 HOXA13P31271 388 aaPredicted RBP7.1□□□□□ -1.27
SPEN-204ENST00000471538 CAP2P40123 477 aa7.1□□□□□ -1.27
SPEN-204ENST00000471538 PSMC6P62333 389 aa7.1□□□□□ -1.27
SPEN-204ENST00000471538 FKBP3Q00688 224 aaKnown RBP7.1□□□□□ -1.27
SPEN-204ENST00000471538 AMPD2Q01433 879 aa7.1□□□□□ -1.27
SPEN-204ENST00000471538 GHRHRQ02643 423 aa7.1□□□□□ -1.27
SPEN-204ENST00000471538 KCNMA1Q12791 1236 aa7.1□□□□□ -1.27
SPEN-204ENST00000471538 TRAF1Q13077 416 aa7.1□□□□□ -1.27
SPEN-204ENST00000471538 IKQ13123 557 aaPredicted RBP7.1□□□□□ -1.27
SPEN-204ENST00000471538 TUBB2AQ13885 445 aa7.1□□□□□ -1.27
SPEN-204ENST00000471538 GIT2Q14161 759 aa7.1□□□□□ -1.27
SPEN-204ENST00000471538 BMT2Q1RMZ1 405 aa7.1□□□□□ -1.27
SPEN-204ENST00000471538 DEFB115Q30KQ5 88 aa7.1□□□□□ -1.27
SPEN-204ENST00000471538 PROX2Q3B8N5 592 aa7.1□□□□□ -1.27
SPEN-204ENST00000471538 ARHGAP29Q52LW3 1261 aa7.1□□□□□ -1.27
SPEN-204ENST00000471538 EAPPQ56P03 285 aaPredicted RBP7.1□□□□□ -1.27
SPEN-204ENST00000471538 ZNF569Q5MCW4 686 aa7.1□□□□□ -1.27
SPEN-204ENST00000471538 FKBP15Q5T1M5 1219 aa7.1□□□□□ -1.27
SPEN-204ENST00000471538 MAP1SQ66K74 1059 aaPredicted RBP7.1□□□□□ -1.27
SPEN-204ENST00000471538 NCAPH2Q6IBW4 605 aa7.1□□□□□ -1.27
SPEN-204ENST00000471538 B3GNT9Q6UX72 402 aa7.1□□□□□ -1.27
SPEN-204ENST00000471538 EPM2AIP1Q7L775 607 aaPredicted RBP7.1□□□□□ -1.27
SPEN-204ENST00000471538 FAM160B2Q86V87 743 aa7.1□□□□□ -1.27
SPEN-204ENST00000471538 CCDC170Q8IYT3 715 aa7.1□□□□□ -1.27
SPEN-204ENST00000471538 OGFOD1Q8N543 542 aa7.1□□□□□ -1.27
SPEN-204ENST00000471538 CYP2W1Q8TAV3 490 aa7.1□□□□□ -1.27
SPEN-204ENST00000471538 BAP1Q92560 729 aa7.1□□□□□ -1.27
SPEN-204ENST00000471538 TBC1D5Q92609 795 aa7.1□□□□□ -1.27
SPEN-204ENST00000471538 PURBQ96QR8 312 aaKnown RBP7.1□□□□□ -1.27
SPEN-204ENST00000471538 UIMC1Q96RL1 719 aa7.1□□□□□ -1.27
SPEN-204ENST00000471538 EIF3CQ99613 913 aaKnown RBP7.1□□□□□ -1.27
SPEN-204ENST00000471538 TSG101Q99816 390 aa7.1□□□□□ -1.27
SPEN-204ENST00000471538 TUBB2BQ9BVA1 445 aa7.1□□□□□ -1.27
SPEN-204ENST00000471538 GLIS2Q9BZE0 524 aaPredicted RBP7.1□□□□□ -1.27
SPEN-204ENST00000471538 TMEM39BQ9GZU3 492 aa7.1□□□□□ -1.27
SPEN-204ENST00000471538 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.1□□□□□ -1.27
SPEN-204ENST00000471538 TSKSQ9UJT2 592 aa7.1□□□□□ -1.27
SPEN-204ENST00000471538 CDC23Q9UJX2 597 aa7.1□□□□□ -1.27
SPEN-204ENST00000471538 PHF20L1A8MW92 1017 aa7.1□□□□□ -1.27
SPEN-204ENST00000471538 EML1O00423 815 aa7.1□□□□□ -1.27
SPEN-204ENST00000471538 PES1O00541 588 aaKnown RBP7.1□□□□□ -1.27
SPEN-204ENST00000471538 WNT10BO00744 389 aa7.1□□□□□ -1.27
SPEN-204ENST00000471538 ZNF263O14978 683 aa7.1□□□□□ -1.27
SPEN-204ENST00000471538 PSMD10O75832 226 aa7.1□□□□□ -1.27
SPEN-204ENST00000471538 ZRANB2O95218 330 aaKnown RBP eCLIP7.1□□□□□ -1.27
SPEN-204ENST00000471538 LCA5LO95447 670 aa7.1□□□□□ -1.27
SPEN-204ENST00000471538 TRIM21P19474 475 aaKnown RBP7.1□□□□□ -1.27
SPEN-204ENST00000471538 HOXD13P35453 343 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms