RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 C4orf19Q8IY42 314 aa11.12□□□□□ -0.63
SF3A1-207ENST00000471342 TRMT44Q8IYL2 757 aaKnown RBP11.12□□□□□ -0.63
SF3A1-207ENST00000471342 DAW1Q8N136 415 aa11.12□□□□□ -0.63
SF3A1-207ENST00000471342 FSIP1Q8NA03 581 aa11.12□□□□□ -0.63
SF3A1-207ENST00000471342 RDM1Q8NG50 284 aa11.12□□□□□ -0.63
SF3A1-207ENST00000471342 ZNF333Q96JL9 665 aa11.12□□□□□ -0.63
SF3A1-207ENST00000471342 GBP4Q96PP9 640 aa11.12□□□□□ -0.63
SF3A1-207ENST00000471342 PANK2Q9BZ23 570 aa11.12□□□□□ -0.63
SF3A1-207ENST00000471342 CRISPLD2Q9H0B8 497 aa11.12□□□□□ -0.63
SF3A1-207ENST00000471342 TUFT1Q9NNX1 390 aa11.12□□□□□ -0.63
SF3A1-207ENST00000471342 SLC5A4Q9NY91 659 aa11.12□□□□□ -0.63
SF3A1-207ENST00000471342 KCNH3Q9ULD8 1083 aa11.12□□□□□ -0.63
SF3A1-207ENST00000471342 FAM184BQ9ULE4 1060 aa11.12□□□□□ -0.63
SF3A1-207ENST00000471342 MKI67P46013 3256 aaKnown RBP11.12□□□□□ -0.63
SF3A1-207ENST00000471342 EMSYQ7Z589 1322 aa11.11□□□□□ -0.63
SF3A1-207ENST00000471342 DOCK5Q9H7D0 1870 aa11.11□□□□□ -0.63
SF3A1-207ENST00000471342 E9PMD0 336 aa11.11□□□□□ -0.63
SF3A1-207ENST00000471342 NKRFO15226 690 aaKnown RBP eCLIP11.11□□□□□ -0.63
SF3A1-207ENST00000471342 DYNC1LI2O43237 492 aaPredicted RBP11.11□□□□□ -0.63
SF3A1-207ENST00000471342 CHMP2AO43633 222 aa11.11□□□□□ -0.63
SF3A1-207ENST00000471342 KLRC4O43908 158 aa11.11□□□□□ -0.63
SF3A1-207ENST00000471342 ZNF202O95125 648 aa11.11□□□□□ -0.63
SF3A1-207ENST00000471342 GH1P01241 217 aa11.11□□□□□ -0.63
SF3A1-207ENST00000471342 MMP3P08254 477 aa11.11□□□□□ -0.63
SF3A1-207ENST00000471342 AKR1A1P14550 325 aa11.11□□□□□ -0.63
SF3A1-207ENST00000471342 BMP6P22004 513 aa11.11□□□□□ -0.63
SF3A1-207ENST00000471342 CASP1P29466 404 aa11.11□□□□□ -0.63
SF3A1-207ENST00000471342 SARSP49591 514 aaKnown RBP11.11□□□□□ -0.63
SF3A1-207ENST00000471342 KRT76Q01546 638 aa11.11□□□□□ -0.63
SF3A1-207ENST00000471342 EHHADHQ08426 723 aa11.11□□□□□ -0.63
SF3A1-207ENST00000471342 MAPK7Q13164 816 aa11.11□□□□□ -0.63
SF3A1-207ENST00000471342 MKRN4PQ13434 485 aaPredicted RBP11.11□□□□□ -0.63
SF3A1-207ENST00000471342 LAMC2Q13753 1193 aa11.11□□□□□ -0.63
SF3A1-207ENST00000471342 MARCH8Q5T0T0 291 aa11.11□□□□□ -0.63
SF3A1-207ENST00000471342 MFSD14CQ5VZR4 134 aa11.11□□□□□ -0.63
SF3A1-207ENST00000471342 SWSAP1Q6NVH7 229 aa11.11□□□□□ -0.63
SF3A1-207ENST00000471342 CNNM4Q6P4Q7 775 aa11.11□□□□□ -0.63
SF3A1-207ENST00000471342 TLK2Q86UE8 772 aa11.11□□□□□ -0.63
SF3A1-207ENST00000471342 DHX37Q8IY37 1157 aaKnown RBP11.11□□□□□ -0.63
SF3A1-207ENST00000471342 SMAP1Q8IYB5 467 aaPredicted RBP11.11□□□□□ -0.63
SF3A1-207ENST00000471342 ELOA2Q8IYF1 753 aaPredicted RBP11.11□□□□□ -0.63
SF3A1-207ENST00000471342 GRAMD1CQ8IYS0 662 aa11.11□□□□□ -0.63
SF3A1-207ENST00000471342 LINC01465Q8N7H1 131 aa11.11□□□□□ -0.63
SF3A1-207ENST00000471342 BANK1Q8NDB2 785 aa11.11□□□□□ -0.63
SF3A1-207ENST00000471342 SEPT1Q8WYJ6 367 aa11.11□□□□□ -0.63
SF3A1-207ENST00000471342 MRPS27Q92552 414 aaKnown RBP11.11□□□□□ -0.63
SF3A1-207ENST00000471342 DNAJC19Q96DA6 116 aa11.11□□□□□ -0.63
SF3A1-207ENST00000471342 FIZ1Q96SL8 496 aa11.11□□□□□ -0.63
SF3A1-207ENST00000471342 PLIN2Q99541 437 aa11.11□□□□□ -0.63
SF3A1-207ENST00000471342 RNPEPQ9H4A4 650 aa11.11□□□□□ -0.63
SF3A1-207ENST00000471342 PRDM10Q9NQV6 1147 aa11.11□□□□□ -0.63
SF3A1-207ENST00000471342 DDX20Q9UHI6 824 aaKnown RBP11.11□□□□□ -0.63
SF3A1-207ENST00000471342 SERTAD1Q9UHV2 236 aa11.11□□□□□ -0.63
SF3A1-207ENST00000471342 PCDHA10Q9Y5I2 948 aa11.11□□□□□ -0.63
SF3A1-207ENST00000471342 IGKV6-21A0A0C4DH24 114 aa11.1□□□□□ -0.63
SF3A1-207ENST00000471342 MYMKA6NI61 221 aa11.1□□□□□ -0.63
SF3A1-207ENST00000471342 WDR64B1ANS9 1081 aa11.1□□□□□ -0.63
SF3A1-207ENST00000471342 B4DLN1 442 aa11.1□□□□□ -0.63
SF3A1-207ENST00000471342 POLR2DO15514 142 aaKnown RBP11.1□□□□□ -0.63
SF3A1-207ENST00000471342 SLC26A4O43511 780 aa11.1□□□□□ -0.63
SF3A1-207ENST00000471342 PPFIA4O75335 1185 aa11.1□□□□□ -0.63
SF3A1-207ENST00000471342 PGK1P00558 417 aa11.1□□□□□ -0.63
SF3A1-207ENST00000471342 F2P00734 622 aa11.1□□□□□ -0.63
SF3A1-207ENST00000471342 LGALS2P05162 132 aa11.1□□□□□ -0.63
SF3A1-207ENST00000471342 P4HBP07237 508 aaKnown RBP11.1□□□□□ -0.63
SF3A1-207ENST00000471342 MUTP22033 750 aa11.1□□□□□ -0.63
SF3A1-207ENST00000471342 TCF7P36402 384 aaPredicted RBP11.1□□□□□ -0.63
SF3A1-207ENST00000471342 NPEPPSP55786 919 aa11.1□□□□□ -0.63
SF3A1-207ENST00000471342 PURAQ00577 322 aaKnown RBP11.1□□□□□ -0.63
SF3A1-207ENST00000471342 BEX3Q00994 111 aa11.1□□□□□ -0.63
SF3A1-207ENST00000471342 CYP4A11Q02928 519 aa11.1□□□□□ -0.63
SF3A1-207ENST00000471342 FAM160A1Q05DH4 1040 aa11.1□□□□□ -0.63
SF3A1-207ENST00000471342 PLCB4Q15147 1175 aa11.1□□□□□ -0.63
SF3A1-207ENST00000471342 FBXO46Q6PJ61 603 aaPredicted RBP11.1□□□□□ -0.63
SF3A1-207ENST00000471342 KRBA2Q6ZNG9 492 aa11.1□□□□□ -0.63
SF3A1-207ENST00000471342 C1orf186Q6ZWK4 172 aa11.1□□□□□ -0.63
SF3A1-207ENST00000471342 PLPPR4Q7Z2D5 763 aa11.1□□□□□ -0.63
SF3A1-207ENST00000471342 MIER3Q7Z3K6 550 aa11.1□□□□□ -0.63
SF3A1-207ENST00000471342 RAET1EQ8TD07 263 aa11.1□□□□□ -0.63
SF3A1-207ENST00000471342 PIGOQ8TEQ8 1089 aa11.1□□□□□ -0.63
SF3A1-207ENST00000471342 PPP1R13LQ8WUF5 828 aa11.1□□□□□ -0.63
SF3A1-207ENST00000471342 RAD54LQ92698 747 aa11.1□□□□□ -0.63
SF3A1-207ENST00000471342 ZBTB10Q96DT7 871 aa11.1□□□□□ -0.63
SF3A1-207ENST00000471342 PAGE5Q96GU1 130 aa11.1□□□□□ -0.63
SF3A1-207ENST00000471342 SPATA33Q96N06 139 aa11.1□□□□□ -0.63
SF3A1-207ENST00000471342 FUCA2Q9BTY2 467 aa11.1□□□□□ -0.63
SF3A1-207ENST00000471342 NIFKQ9BYG3 293 aaKnown RBP11.1□□□□□ -0.63
SF3A1-207ENST00000471342 XPNPEP1Q9NQW7 623 aa11.1□□□□□ -0.63
SF3A1-207ENST00000471342 DACT1Q9NYF0 836 aa11.1□□□□□ -0.63
SF3A1-207ENST00000471342 GABBR1Q9UBS5 961 aa11.1□□□□□ -0.63
SF3A1-207ENST00000471342 SLFN14P0C7P3 912 aa11.09□□□□□ -0.63
SF3A1-207ENST00000471342 CYP11B2P19099 503 aa11.09□□□□□ -0.63
SF3A1-207ENST00000471342 SFNP31947 248 aa11.09□□□□□ -0.63
SF3A1-207ENST00000471342 QARSP47897 775 aaKnown RBP11.09□□□□□ -0.63
SF3A1-207ENST00000471342 RARRES1P49788 294 aa11.09□□□□□ -0.63
SF3A1-207ENST00000471342 JAK3P52333 1124 aa11.09□□□□□ -0.63
SF3A1-207ENST00000471342 MCM6Q14566 821 aa11.09□□□□□ -0.63
SF3A1-207ENST00000471342 LRRC41Q15345 812 aa11.09□□□□□ -0.63
SF3A1-207ENST00000471342 KLHL40Q2TBA0 621 aa11.09□□□□□ -0.63
SF3A1-207ENST00000471342 UBE2Q1Q7Z7E8 422 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms