RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 AMHP03971 560 aa15.36■□□□□ 0.05
HMGN1-211ENST00000471260 ARP10275 920 aa15.36■□□□□ 0.05
HMGN1-211ENST00000471260 DEKP35659 375 aaKnown RBP15.36■□□□□ 0.05
HMGN1-211ENST00000471260 STAT5BP51692 787 aa15.36■□□□□ 0.05
HMGN1-211ENST00000471260 ACTR2P61160 394 aa15.36■□□□□ 0.05
HMGN1-211ENST00000471260 SETQ01105 290 aaPredicted RBP15.36■□□□□ 0.05
HMGN1-211ENST00000471260 GRIK4Q16099 956 aa15.36■□□□□ 0.05
HMGN1-211ENST00000471260 JAKMIP3Q5VZ66 844 aa15.36■□□□□ 0.05
HMGN1-211ENST00000471260 SYMPKQ92797 1274 aaKnown RBP15.36■□□□□ 0.05
HMGN1-211ENST00000471260 SH3GLB2Q9NR46 395 aa15.36■□□□□ 0.05
HMGN1-211ENST00000471260 TUBE1Q9UJT0 475 aa15.36■□□□□ 0.05
HMGN1-211ENST00000471260 INSL6Q9Y581 213 aa15.36■□□□□ 0.05
HMGN1-211ENST00000471260 GTPBP6O43824 516 aaPredicted RBP15.35■□□□□ 0.05
HMGN1-211ENST00000471260 MARK3P27448 753 aa15.35■□□□□ 0.05
HMGN1-211ENST00000471260 TOB2Q14106 344 aaPredicted RBP15.35■□□□□ 0.05
HMGN1-211ENST00000471260 TCTN1Q2MV58 587 aa15.35■□□□□ 0.05
HMGN1-211ENST00000471260 PLA2G4DQ86XP0 818 aa15.35■□□□□ 0.05
HMGN1-211ENST00000471260 TRIM22Q8IYM9 498 aa15.35■□□□□ 0.05
HMGN1-211ENST00000471260 FAM177A1Q8N128 213 aaPredicted RBP15.35■□□□□ 0.05
HMGN1-211ENST00000471260 USP38Q8NB14 1042 aa15.35■□□□□ 0.05
HMGN1-211ENST00000471260 ATXN2LQ8WWM7 1075 aaKnown RBP15.35■□□□□ 0.05
HMGN1-211ENST00000471260 PHKBQ93100 1093 aa15.35■□□□□ 0.05
HMGN1-211ENST00000471260 PCYT2Q99447 389 aa15.35■□□□□ 0.05
HMGN1-211ENST00000471260 COL25A1Q9BXS0 654 aaPredicted RBP15.35■□□□□ 0.05
HMGN1-211ENST00000471260 TSPYL2Q9H2G4 693 aaPredicted RBP15.35■□□□□ 0.05
HMGN1-211ENST00000471260 TBC1D22BQ9NU19 505 aa15.35■□□□□ 0.05
HMGN1-211ENST00000471260 IGLV3-22A0A075B6J6 115 aa15.34■□□□□ 0.05
HMGN1-211ENST00000471260 IGKV6D-21A0A0A0MT36 114 aa15.34■□□□□ 0.05
HMGN1-211ENST00000471260 FAM86B1E9PN63 330 aa15.34■□□□□ 0.05
HMGN1-211ENST00000471260 EIF5BO60841 1220 aaKnown RBP15.34■□□□□ 0.05
HMGN1-211ENST00000471260 CTSHP09668 335 aa15.34■□□□□ 0.05
HMGN1-211ENST00000471260 FAM86B2P0C5J1 330 aa15.34■□□□□ 0.05
HMGN1-211ENST00000471260 CIITAP33076 1130 aa15.34■□□□□ 0.05
HMGN1-211ENST00000471260 CCT2P78371 535 aaKnown RBP15.34■□□□□ 0.05
HMGN1-211ENST00000471260 ITGB3BPQ13352 177 aaPredicted RBP15.34■□□□□ 0.05
HMGN1-211ENST00000471260 MARCH8Q5T0T0 291 aa15.34■□□□□ 0.05
HMGN1-211ENST00000471260 CPLX2Q6PUV4 134 aaKnown RBP15.34■□□□□ 0.05
HMGN1-211ENST00000471260 FAM43BQ6ZT52 329 aaPredicted RBP15.34■□□□□ 0.05
HMGN1-211ENST00000471260 TOP1MTQ969P6 601 aa15.34■□□□□ 0.05
HMGN1-211ENST00000471260 SLC26A6Q9BXS9 759 aa15.34■□□□□ 0.05
HMGN1-211ENST00000471260 IFIH1Q9BYX4 1025 aaKnown RBP15.34■□□□□ 0.05
HMGN1-211ENST00000471260 LMCD1Q9NZU5 365 aa15.34■□□□□ 0.05
HMGN1-211ENST00000471260 PTPRSQ13332 1948 aa15.33■□□□□ 0.05
HMGN1-211ENST00000471260 IPO5O00410 1097 aaKnown RBP15.33■□□□□ 0.04
HMGN1-211ENST00000471260 CPLX1O14810 134 aa15.33■□□□□ 0.04
HMGN1-211ENST00000471260 CHRNA1P02708 482 aa15.33■□□□□ 0.04
HMGN1-211ENST00000471260 INSRRP14616 1297 aa15.33■□□□□ 0.04
HMGN1-211ENST00000471260 HTRA4P83105 476 aaPredicted RBP15.33■□□□□ 0.04
HMGN1-211ENST00000471260 SSRP1Q08945 709 aaKnown RBP15.33■□□□□ 0.04
HMGN1-211ENST00000471260 MGAT3Q09327 533 aa15.33■□□□□ 0.04
HMGN1-211ENST00000471260 NBR1Q14596 966 aa15.33■□□□□ 0.04
HMGN1-211ENST00000471260 FAM160B1Q5W0V3 765 aa15.33■□□□□ 0.04
HMGN1-211ENST00000471260 ABHD15Q6UXT9 468 aa15.33■□□□□ 0.04
HMGN1-211ENST00000471260 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.33■□□□□ 0.049e-8■■□□□ 13.7
HMGN1-211ENST00000471260 MYOCDQ8IZQ8 938 aa15.33■□□□□ 0.04
HMGN1-211ENST00000471260 PPM1EQ8WY54 764 aa15.33■□□□□ 0.04
HMGN1-211ENST00000471260 ARNTL2Q8WYA1 636 aa15.33■□□□□ 0.04
HMGN1-211ENST00000471260 TGS1Q96RS0 853 aaKnown RBP15.33■□□□□ 0.04
HMGN1-211ENST00000471260 C22orf23Q9BZE7 217 aa15.33■□□□□ 0.04
HMGN1-211ENST00000471260 THEGQ9P2T0 379 aa15.33■□□□□ 0.04
HMGN1-211ENST00000471260 TRPC6Q9Y210 931 aa15.33■□□□□ 0.04
HMGN1-211ENST00000471260 MTCH2Q9Y6C9 303 aa15.33■□□□□ 0.04
HMGN1-211ENST00000471260 SQORQ9Y6N5 450 aa15.33■□□□□ 0.04
HMGN1-211ENST00000471260 MICAL3Q7RTP6 2002 aa15.33■□□□□ 0.04
HMGN1-211ENST00000471260 PRUNE2Q8WUY3 3088 aa15.32■□□□□ 0.04
HMGN1-211ENST00000471260 CHD9Q3L8U1 2897 aa15.32■□□□□ 0.04
HMGN1-211ENST00000471260 POTEB3A0JP26 581 aa15.32■□□□□ 0.04
HMGN1-211ENST00000471260 LCHNA4D1U4 455 aa15.32■□□□□ 0.04
HMGN1-211ENST00000471260 DHX15O43143 795 aaKnown RBP15.32■□□□□ 0.04
HMGN1-211ENST00000471260 HBP1O60381 514 aa15.32■□□□□ 0.04
HMGN1-211ENST00000471260 ARHGEF15O94989 841 aa15.32■□□□□ 0.04
HMGN1-211ENST00000471260 USP11P51784 963 aa15.32■□□□□ 0.04
HMGN1-211ENST00000471260 ERVK-21P61565 698 aa15.32■□□□□ 0.04
HMGN1-211ENST00000471260 PLCB4Q15147 1175 aa15.32■□□□□ 0.04
HMGN1-211ENST00000471260 TJAP1Q5JTD0 557 aa15.32■□□□□ 0.04
HMGN1-211ENST00000471260 IER5Q5VY09 327 aa15.32■□□□□ 0.04
HMGN1-211ENST00000471260 ZNF746Q6NUN9 644 aaPredicted RBP15.32■□□□□ 0.04
HMGN1-211ENST00000471260 MIS18BP1Q6P0N0 1132 aa15.32■□□□□ 0.04
HMGN1-211ENST00000471260 POTEBQ6S5H4 581 aa15.32■□□□□ 0.04
HMGN1-211ENST00000471260 RUFY4Q6ZNE9 571 aa15.32■□□□□ 0.04
HMGN1-211ENST00000471260 TMCO2Q7Z6W1 182 aaPredicted RBP15.32■□□□□ 0.04
HMGN1-211ENST00000471260 SMAP1Q8IYB5 467 aaPredicted RBP15.32■□□□□ 0.04
HMGN1-211ENST00000471260 NME8Q8N427 588 aa15.32■□□□□ 0.04
HMGN1-211ENST00000471260 DNAJB3Q8WWF6 145 aa15.32■□□□□ 0.04
HMGN1-211ENST00000471260 ZNF577Q9BSK1 485 aa15.32■□□□□ 0.04
HMGN1-211ENST00000471260 CERS4Q9HA82 394 aa15.32■□□□□ 0.04
HMGN1-211ENST00000471260 UPF2Q9HAU5 1272 aaKnown RBP15.32■□□□□ 0.04
HMGN1-211ENST00000471260 TCEAL9Q9UHQ7 104 aa15.32■□□□□ 0.04
HMGN1-211ENST00000471260 PCDHA2Q9Y5H9 948 aa15.32■□□□□ 0.04
HMGN1-211ENST00000471260 SMIM35A0A1B0GVV1 85 aa15.31■□□□□ 0.04
HMGN1-211ENST00000471260 M0QZ92 97 aa15.31■□□□□ 0.04
HMGN1-211ENST00000471260 BACH1O14867 736 aa15.31■□□□□ 0.04
HMGN1-211ENST00000471260 DEXIO95424 95 aa15.31■□□□□ 0.04
HMGN1-211ENST00000471260 CCNE2O96020 404 aa15.31■□□□□ 0.04
HMGN1-211ENST00000471260 NLRP5P59047 1200 aa15.31■□□□□ 0.04
HMGN1-211ENST00000471260 ANAPC15P60006 121 aa15.31■□□□□ 0.04
HMGN1-211ENST00000471260 IGBP1P78318 339 aa15.31■□□□□ 0.04
HMGN1-211ENST00000471260 KRT76Q01546 638 aa15.31■□□□□ 0.04
HMGN1-211ENST00000471260 BECN1Q14457 450 aa15.31■□□□□ 0.04
HMGN1-211ENST00000471260 CCDC85BQ15834 202 aaPredicted RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms