RNA–Protein interactions for RNA: ENST00000469896.1

COMMD2-202, Transcript of COMM domain containing 2, humanhuman

TSL 1 (best)

Gene COMMD2, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-202ENST00000469896 AAASQ9NRG9 546 aa13.23□□□□□ -0.29
COMMD2-202ENST00000469896 LIMD1Q9UGP4 676 aa13.23□□□□□ -0.29
COMMD2-202ENST00000469896 STX8Q9UNK0 236 aa13.23□□□□□ -0.29
COMMD2-202ENST00000469896 PCDHB12Q9Y5F1 795 aa13.23□□□□□ -0.29
COMMD2-202ENST00000469896 MRVI1Q9Y6F6 885 aa13.23□□□□□ -0.29
COMMD2-202ENST00000469896 DCDC2BA2VCK2 349 aa13.22□□□□□ -0.29
COMMD2-202ENST00000469896 ENPP3O14638 875 aa13.22□□□□□ -0.29
COMMD2-202ENST00000469896 TREHO43280 583 aa13.22□□□□□ -0.29
COMMD2-202ENST00000469896 KINO60870 393 aaKnown RBP13.22□□□□□ -0.29
COMMD2-202ENST00000469896 HOXD8P13378 290 aaPredicted RBP13.22□□□□□ -0.29
COMMD2-202ENST00000469896 SLFN5Q08AF3 891 aa13.22□□□□□ -0.29
COMMD2-202ENST00000469896 SIX5Q8N196 739 aa13.22□□□□□ -0.29
COMMD2-202ENST00000469896 RASGRP4Q8TDF6 673 aa13.22□□□□□ -0.29
COMMD2-202ENST00000469896 NSUN6Q8TEA1 469 aaKnown RBP13.22□□□□□ -0.29
COMMD2-202ENST00000469896 POMKQ9H5K3 350 aa13.22□□□□□ -0.29
COMMD2-202ENST00000469896 DDX41Q9UJV9 622 aaKnown RBP13.22□□□□□ -0.29
COMMD2-202ENST00000469896 SLC3A2P08195 630 aaKnown RBP13.21□□□□□ -0.29
COMMD2-202ENST00000469896 STAG3L1P0CL83 205 aa13.21□□□□□ -0.29
COMMD2-202ENST00000469896 MTHFRP42898 656 aa13.21□□□□□ -0.29
COMMD2-202ENST00000469896 TDO2P48775 406 aa13.21□□□□□ -0.29
COMMD2-202ENST00000469896 SYDE2Q5VT97 1194 aa13.21□□□□□ -0.29
COMMD2-202ENST00000469896 LLGL2Q6P1M3 1020 aa13.21□□□□□ -0.29
COMMD2-202ENST00000469896 RUFY4Q6ZNE9 571 aa13.21□□□□□ -0.29
COMMD2-202ENST00000469896 BBXQ8WY36 941 aaPredicted RBP13.21□□□□□ -0.29
COMMD2-202ENST00000469896 RIN2Q8WYP3 895 aaPredicted RBP13.21□□□□□ -0.29
COMMD2-202ENST00000469896 CASP10Q92851 521 aa13.21□□□□□ -0.29
COMMD2-202ENST00000469896 BORCS6Q96GS4 357 aa13.21□□□□□ -0.29
COMMD2-202ENST00000469896 SPATA33Q96N06 139 aa13.21□□□□□ -0.29
COMMD2-202ENST00000469896 IWS1Q96ST2 819 aa13.21□□□□□ -0.29
COMMD2-202ENST00000469896 OSBPL7Q9BZF2 842 aa13.21□□□□□ -0.29
COMMD2-202ENST00000469896 ADAM7Q9H2U9 754 aa13.21□□□□□ -0.29
COMMD2-202ENST00000469896 ERVK-5Q9HDB9 667 aa13.21□□□□□ -0.29
COMMD2-202ENST00000469896 SMIM10L2AP0DMW4 78 aa13.2□□□□□ -0.3
COMMD2-202ENST00000469896 SMIM10L2BP0DMW5 78 aa13.2□□□□□ -0.3
COMMD2-202ENST00000469896 GHRP10912 638 aa13.2□□□□□ -0.3
COMMD2-202ENST00000469896 HOXC8P31273 242 aa13.2□□□□□ -0.3
COMMD2-202ENST00000469896 TFAP4Q01664 338 aa13.2□□□□□ -0.3
COMMD2-202ENST00000469896 TDGQ13569 410 aa13.2□□□□□ -0.3
COMMD2-202ENST00000469896 COL9A3Q14050 684 aaPredicted RBP13.2□□□□□ -0.3
COMMD2-202ENST00000469896 PAN2Q504Q3 1202 aaKnown RBP13.2□□□□□ -0.3
COMMD2-202ENST00000469896 FAM26DQ5JW98 314 aa13.2□□□□□ -0.3
COMMD2-202ENST00000469896 SPOUT1Q5T280 376 aaKnown RBP13.2□□□□□ -0.3
COMMD2-202ENST00000469896 NPAS4Q8IUM7 802 aa13.2□□□□□ -0.3
COMMD2-202ENST00000469896 RGS22Q8NE09 1264 aa13.2□□□□□ -0.3
COMMD2-202ENST00000469896 DCAF4Q8WV16 495 aa13.2□□□□□ -0.3
COMMD2-202ENST00000469896 PUS7LQ9H0K6 701 aaKnown RBP13.2□□□□□ -0.3
COMMD2-202ENST00000469896 MTMR7Q9Y216 660 aa13.2□□□□□ -0.3
COMMD2-202ENST00000469896 USTQ9Y2C2 406 aa13.2□□□□□ -0.3
COMMD2-202ENST00000469896 CEP295Q9C0D2 2601 aa13.2□□□□□ -0.3
COMMD2-202ENST00000469896 FLNBO75369 2602 aaKnown RBP13.19□□□□□ -0.3
COMMD2-202ENST00000469896 H3BRB1 525 aa13.19□□□□□ -0.3
COMMD2-202ENST00000469896 EIF3JO75822 258 aaKnown RBP13.19□□□□□ -0.3
COMMD2-202ENST00000469896 IFIT2P09913 472 aaKnown RBP13.19□□□□□ -0.3
COMMD2-202ENST00000469896 SP9P0CG40 484 aa13.19□□□□□ -0.3
COMMD2-202ENST00000469896 SLC16A2P36021 539 aa13.19□□□□□ -0.3
COMMD2-202ENST00000469896 TBC1D8BQ0IIM8 1120 aa13.19□□□□□ -0.3
COMMD2-202ENST00000469896 KCNC3Q14003 757 aa13.19□□□□□ -0.3
COMMD2-202ENST00000469896 HSP90AB4PQ58FF6 505 aa13.19□□□□□ -0.3
COMMD2-202ENST00000469896 BTNL9Q6UXG8 535 aa13.19□□□□□ -0.3
COMMD2-202ENST00000469896 FAM9BQ8IZU0 186 aa13.19□□□□□ -0.3
COMMD2-202ENST00000469896 CLASRPQ8N2M8 674 aaKnown RBP13.19□□□□□ -0.3
COMMD2-202ENST00000469896 SUMF1Q8NBK3 374 aa13.19□□□□□ -0.3
COMMD2-202ENST00000469896 STRBPQ96SI9 672 aaKnown RBP13.19□□□□□ -0.3
COMMD2-202ENST00000469896 MAF1Q9H063 256 aa13.19□□□□□ -0.3
COMMD2-202ENST00000469896 TUT1Q9H6E5 874 aaKnown RBP13.19□□□□□ -0.3
COMMD2-202ENST00000469896 CYP26B1Q9NR63 512 aa13.19□□□□□ -0.3
COMMD2-202ENST00000469896 DBR1Q9UK59 544 aaKnown RBP13.19□□□□□ -0.3
COMMD2-202ENST00000469896 WDR19Q8NEZ3 1342 aa13.18□□□□□ -0.3
COMMD2-202ENST00000469896 MYO10Q9HD67 2058 aa13.18□□□□□ -0.3
COMMD2-202ENST00000469896 GSG1L2A8MUP6 293 aa13.18□□□□□ -0.3
COMMD2-202ENST00000469896 FGF18O76093 207 aa13.18□□□□□ -0.3
COMMD2-202ENST00000469896 TRIM27P14373 513 aa13.18□□□□□ -0.3
COMMD2-202ENST00000469896 PPM1JQ5JR12 505 aa13.18□□□□□ -0.3
COMMD2-202ENST00000469896 KCNV1Q6PIU1 500 aa13.18□□□□□ -0.3
COMMD2-202ENST00000469896 RSPH3Q86UC2 560 aa13.18□□□□□ -0.3
COMMD2-202ENST00000469896 THNSL1Q8IYQ7 743 aa13.18□□□□□ -0.3
COMMD2-202ENST00000469896 ACSF2Q96CM8 615 aaPredicted RBP13.18□□□□□ -0.3
COMMD2-202ENST00000469896 RMDN3Q96TC7 470 aa13.18□□□□□ -0.3
COMMD2-202ENST00000469896 C16orf70Q9BSU1 422 aa13.18□□□□□ -0.3
COMMD2-202ENST00000469896 FTHL17Q9BXU8 183 aa13.18□□□□□ -0.3
COMMD2-202ENST00000469896 RNPEPQ9H4A4 650 aa13.18□□□□□ -0.3
COMMD2-202ENST00000469896 IL1RAPL2Q9NP60 686 aa13.18□□□□□ -0.3
COMMD2-202ENST00000469896 ENTPD7Q9NQZ7 604 aa13.18□□□□□ -0.3
COMMD2-202ENST00000469896 TMEM260Q9NX78 707 aa13.18□□□□□ -0.3
COMMD2-202ENST00000469896 PUF60Q9UHX1 559 aaKnown RBP13.18□□□□□ -0.3
COMMD2-202ENST00000469896 ANGPTL2Q9UKU9 493 aa13.18□□□□□ -0.3
COMMD2-202ENST00000469896 DUSP12Q9UNI6 340 aa13.18□□□□□ -0.3
COMMD2-202ENST00000469896 SPTLC1O15269 473 aa13.17□□□□□ -0.3
COMMD2-202ENST00000469896 APPP05067 770 aa13.17□□□□□ -0.3
COMMD2-202ENST00000469896 ERVFC1P60507 584 aa13.17□□□□□ -0.3
COMMD2-202ENST00000469896 HSDL1Q3SXM5 330 aa13.17□□□□□ -0.3
COMMD2-202ENST00000469896 ATAT1Q5SQI0 421 aa13.17□□□□□ -0.3
COMMD2-202ENST00000469896 MYSM1Q5VVJ2 828 aa13.17□□□□□ -0.3
COMMD2-202ENST00000469896 PLPP4Q5VZY2 271 aa13.17□□□□□ -0.3
COMMD2-202ENST00000469896 C1orf210Q8IVY1 113 aa13.17□□□□□ -0.3
COMMD2-202ENST00000469896 EHMT1Q9H9B1 1298 aa13.17□□□□□ -0.3
COMMD2-202ENST00000469896 NGRNQ9NPE2 291 aaKnown RBP13.17□□□□□ -0.3
COMMD2-202ENST00000469896 LRFN2Q9ULH4 789 aa13.17□□□□□ -0.3
COMMD2-202ENST00000469896 USP18Q9UMW8 372 aa13.17□□□□□ -0.3
COMMD2-202ENST00000469896 VPS9D1Q9Y2B5 631 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms