RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 ZNF75DP51815 510 aa9.21□□□□□ -0.93
BRCA1-208ENST00000468300 BANK1Q8NDB2 785 aa9.21□□□□□ -0.93
BRCA1-208ENST00000468300 PIGOQ8TEQ8 1089 aa9.21□□□□□ -0.93
BRCA1-208ENST00000468300 MROH8Q9H579 483 aa9.21□□□□□ -0.93
BRCA1-208ENST00000468300 TBC1D22BQ9NU19 505 aa9.21□□□□□ -0.93
BRCA1-208ENST00000468300 INTS13Q9NVM9 706 aa9.21□□□□□ -0.93
BRCA1-208ENST00000468300 NFASCO94856 1347 aa9.21□□□□□ -0.94
BRCA1-208ENST00000468300 EYA4O95677 639 aa9.21□□□□□ -0.94
BRCA1-208ENST00000468300 SLC10A3P09131 477 aa9.21□□□□□ -0.94
BRCA1-208ENST00000468300 MUTP22033 750 aa9.21□□□□□ -0.94
BRCA1-208ENST00000468300 TMEM63BQ5T3F8 832 aa9.21□□□□□ -0.94
BRCA1-208ENST00000468300 CDKAL1Q5VV42 579 aa9.21□□□□□ -0.94
BRCA1-208ENST00000468300 C1orf186Q6ZWK4 172 aa9.21□□□□□ -0.94
BRCA1-208ENST00000468300 IRF2BP1Q8IU81 584 aa9.21□□□□□ -0.94
BRCA1-208ENST00000468300 GPRC5AQ8NFJ5 357 aa9.21□□□□□ -0.94
BRCA1-208ENST00000468300 CDK5RAP3Q96JB5 506 aa9.21□□□□□ -0.94
BRCA1-208ENST00000468300 ZIC5Q96T25 663 aa9.21□□□□□ -0.94
BRCA1-208ENST00000468300 SAMSN1Q9NSI8 373 aaKnown RBP9.21□□□□□ -0.94
BRCA1-208ENST00000468300 PNMA3Q9UL41 463 aa9.21□□□□□ -0.94
BRCA1-208ENST00000468300 MAPK8IP1Q9UQF2 711 aa9.21□□□□□ -0.94
BRCA1-208ENST00000468300 EIF3JO75822 258 aaKnown RBP9.2□□□□□ -0.94
BRCA1-208ENST00000468300 ASIC1P78348 528 aa9.2□□□□□ -0.94
BRCA1-208ENST00000468300 CACNB1Q02641 598 aaPredicted RBP9.2□□□□□ -0.94
BRCA1-208ENST00000468300 ZNF792Q3KQV3 632 aa9.2□□□□□ -0.94
BRCA1-208ENST00000468300 RINT1Q6NUQ1 792 aa9.2□□□□□ -0.94
BRCA1-208ENST00000468300 TPH2Q8IWU9 490 aa9.2□□□□□ -0.94
BRCA1-208ENST00000468300 ERMNQ8TAM6 284 aa9.2□□□□□ -0.94
BRCA1-208ENST00000468300 LXNQ9BS40 222 aa9.2□□□□□ -0.94
BRCA1-208ENST00000468300 RMND1Q9NWS8 449 aa9.2□□□□□ -0.94
BRCA1-208ENST00000468300 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.2□□□□□ -0.94
BRCA1-208ENST00000468300 RWDD2AQ9UIY3 292 aa9.2□□□□□ -0.94
BRCA1-208ENST00000468300 TRIM49BA6NDI0 452 aa9.2□□□□□ -0.94
BRCA1-208ENST00000468300 TPD52L2O43399 206 aaKnown RBP9.2□□□□□ -0.94
BRCA1-208ENST00000468300 ATG7O95352 703 aa9.2□□□□□ -0.94
BRCA1-208ENST00000468300 LYPLA2O95372 231 aa9.2□□□□□ -0.94
BRCA1-208ENST00000468300 ARIH2O95376 493 aa9.2□□□□□ -0.94
BRCA1-208ENST00000468300 AMPD3Q01432 767 aa9.2□□□□□ -0.94
BRCA1-208ENST00000468300 COASYQ13057 564 aa9.2□□□□□ -0.94
BRCA1-208ENST00000468300 RGMBQ6NW40 437 aa9.2□□□□□ -0.94
BRCA1-208ENST00000468300 GTF3C2Q8WUA4 911 aaPredicted RBP9.2□□□□□ -0.94
BRCA1-208ENST00000468300 FIZ1Q96SL8 496 aa9.2□□□□□ -0.94
BRCA1-208ENST00000468300 MMP19Q99542 508 aa9.2□□□□□ -0.94
BRCA1-208ENST00000468300 DUSP9Q99956 384 aaKnown RBP9.2□□□□□ -0.94
BRCA1-208ENST00000468300 BHMT2Q9H2M3 363 aa9.2□□□□□ -0.94
BRCA1-208ENST00000468300 CTNND2Q9UQB3 1225 aa9.2□□□□□ -0.94
BRCA1-208ENST00000468300 MGAMO43451 1857 aa9.2□□□□□ -0.94
BRCA1-208ENST00000468300 TMEM150BA6NC51 233 aa9.2□□□□□ -0.94
BRCA1-208ENST00000468300 RSPH10B2B2RC85 870 aa9.2□□□□□ -0.94
BRCA1-208ENST00000468300 POTEB2H3BUK9 544 aa9.2□□□□□ -0.94
BRCA1-208ENST00000468300 NKRFO15226 690 aaKnown RBP eCLIP9.2□□□□□ -0.94
BRCA1-208ENST00000468300 RSPH10BP0C881 870 aa9.2□□□□□ -0.94
BRCA1-208ENST00000468300 HOXD13P35453 343 aa9.2□□□□□ -0.94
BRCA1-208ENST00000468300 COPB2P35606 906 aa9.2□□□□□ -0.94
BRCA1-208ENST00000468300 ZNF157P51786 506 aaPredicted RBP9.2□□□□□ -0.94
BRCA1-208ENST00000468300 STX17P56962 302 aa9.2□□□□□ -0.94
BRCA1-208ENST00000468300 PDE4DQ08499 809 aa9.2□□□□□ -0.94
BRCA1-208ENST00000468300 STXBP2Q15833 593 aa9.2□□□□□ -0.94
BRCA1-208ENST00000468300 TTI2Q6NXR4 508 aa9.2□□□□□ -0.94
BRCA1-208ENST00000468300 MAMDC4Q6UXC1 1216 aa9.2□□□□□ -0.94
BRCA1-208ENST00000468300 TSHZ1Q6ZSZ6 1077 aa9.2□□□□□ -0.94
BRCA1-208ENST00000468300 GPBP1Q86WP2 473 aa9.2□□□□□ -0.94
BRCA1-208ENST00000468300 CCDC34Q96HJ3 373 aa9.2□□□□□ -0.94
BRCA1-208ENST00000468300 REEP2Q9BRK0 252 aa9.2□□□□□ -0.94
BRCA1-208ENST00000468300 KATNBL1Q9H079 304 aa9.2□□□□□ -0.94
BRCA1-208ENST00000468300 SEMA6BQ9H3T3 888 aa9.2□□□□□ -0.94
BRCA1-208ENST00000468300 SLC39A2Q9NP94 309 aa9.2□□□□□ -0.94
BRCA1-208ENST00000468300 DNM3Q9UQ16 869 aa9.2□□□□□ -0.94
BRCA1-208ENST00000468300 NFE2L3Q9Y4A8 694 aa9.2□□□□□ -0.94
BRCA1-208ENST00000468300 HTTP42858 3142 aa9.19□□□□□ -0.94
BRCA1-208ENST00000468300 SMTNL1A8MU46 457 aa9.19□□□□□ -0.94
BRCA1-208ENST00000468300 ZNF862O60290 1169 aa9.19□□□□□ -0.94
BRCA1-208ENST00000468300 CASP5P51878 434 aa9.19□□□□□ -0.94
BRCA1-208ENST00000468300 MAPK7Q13164 816 aa9.19□□□□□ -0.94
BRCA1-208ENST00000468300 SPATA1Q5VX52 437 aa9.19□□□□□ -0.94
BRCA1-208ENST00000468300 ZNF746Q6NUN9 644 aaPredicted RBP9.19□□□□□ -0.94
BRCA1-208ENST00000468300 ABHD15Q6UXT9 468 aa9.19□□□□□ -0.94
BRCA1-208ENST00000468300 MIER3Q7Z3K6 550 aa9.19□□□□□ -0.94
BRCA1-208ENST00000468300 POLD4Q9HCU8 107 aa9.19□□□□□ -0.94
BRCA1-208ENST00000468300 SYNGAP1Q96PV0 1343 aa9.19□□□□□ -0.94
BRCA1-208ENST00000468300 SYNRGQ9UMZ2 1314 aa9.19□□□□□ -0.94
BRCA1-208ENST00000468300 MYH11P35749 1972 aa9.19□□□□□ -0.94
BRCA1-208ENST00000468300 BECN2A8MW95 431 aa9.19□□□□□ -0.94
BRCA1-208ENST00000468300 P4HBP07237 508 aaKnown RBP9.19□□□□□ -0.94
BRCA1-208ENST00000468300 ATP4AP20648 1035 aa9.19□□□□□ -0.94
BRCA1-208ENST00000468300 PTGS1P23219 599 aa9.19□□□□□ -0.94
BRCA1-208ENST00000468300 GCLCP48506 637 aaPredicted RBP9.19□□□□□ -0.94
BRCA1-208ENST00000468300 KLHL10Q6JEL2 608 aa9.19□□□□□ -0.94
BRCA1-208ENST00000468300 EPM2AIP1Q7L775 607 aaPredicted RBP9.19□□□□□ -0.94
BRCA1-208ENST00000468300 NLRX1Q86UT6 975 aa9.19□□□□□ -0.94
BRCA1-208ENST00000468300 DAW1Q8N136 415 aa9.19□□□□□ -0.94
BRCA1-208ENST00000468300 NELFBQ8WX92 580 aa9.19□□□□□ -0.94
BRCA1-208ENST00000468300 DOCK3Q8IZD9 2030 aa9.18□□□□□ -0.94
BRCA1-208ENST00000468300 IGKV6D-21A0A0A0MT36 114 aa9.18□□□□□ -0.94
BRCA1-208ENST00000468300 GOLGA6L19H0YKK7 550 aa9.18□□□□□ -0.94
BRCA1-208ENST00000468300 UBA1P22314 1058 aaKnown RBP9.18□□□□□ -0.94
BRCA1-208ENST00000468300 CDC25BP30305 580 aa9.18□□□□□ -0.94
BRCA1-208ENST00000468300 RAD51AP2Q09MP3 1159 aa9.18□□□□□ -0.94
BRCA1-208ENST00000468300 HSP90AA4PQ58FG1 418 aa9.18□□□□□ -0.94
BRCA1-208ENST00000468300 ANKRD40Q6AI12 368 aa9.18□□□□□ -0.94
BRCA1-208ENST00000468300 CCDC62Q6P9F0 684 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms