RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 ARHGEF35A5YM69 484 aa11.29□□□□□ -0.6
MSH5-213ENST00000468136 ADM5C9JUS6 153 aa11.29□□□□□ -0.6
MSH5-213ENST00000468136 EML1O00423 815 aa11.29□□□□□ -0.6
MSH5-213ENST00000468136 PDXKO00764 312 aa11.29□□□□□ -0.6
MSH5-213ENST00000468136 DHX15O43143 795 aaKnown RBP11.29□□□□□ -0.6
MSH5-213ENST00000468136 CALUO43852 315 aaPredicted RBP11.29□□□□□ -0.6
MSH5-213ENST00000468136 EIF3JO75822 258 aaKnown RBP11.29□□□□□ -0.6
MSH5-213ENST00000468136 FAM13AO94988 1023 aa11.29□□□□□ -0.6
MSH5-213ENST00000468136 FCER1AP12319 257 aa11.29□□□□□ -0.6
MSH5-213ENST00000468136 ICAM3P32942 547 aa11.29□□□□□ -0.6
MSH5-213ENST00000468136 QARSP47897 775 aaKnown RBP11.29□□□□□ -0.6
MSH5-213ENST00000468136 MARSP56192 900 aaKnown RBP11.29□□□□□ -0.6
MSH5-213ENST00000468136 PSMC5P62195 406 aa11.29□□□□□ -0.6
MSH5-213ENST00000468136 MRPS9P82933 396 aaKnown RBP11.29□□□□□ -0.6
MSH5-213ENST00000468136 SNAPC2Q13487 334 aa11.29□□□□□ -0.6
MSH5-213ENST00000468136 TTLL12Q14166 644 aaPredicted RBP11.29□□□□□ -0.6
MSH5-213ENST00000468136 MYBPC2Q14324 1141 aa11.29□□□□□ -0.6
MSH5-213ENST00000468136 TSR1Q2NL82 804 aaKnown RBP11.29□□□□□ -0.6
MSH5-213ENST00000468136 LDLRAD1Q5T700 205 aa11.29□□□□□ -0.6
MSH5-213ENST00000468136 ANKRD40Q6AI12 368 aa11.29□□□□□ -0.6
MSH5-213ENST00000468136 ARMCX5Q6P1M9 558 aa11.29□□□□□ -0.6
MSH5-213ENST00000468136 KCNV1Q6PIU1 500 aa11.29□□□□□ -0.6
MSH5-213ENST00000468136 TPH2Q8IWU9 490 aa11.29□□□□□ -0.6
MSH5-213ENST00000468136 ZC3H3Q8IXZ2 948 aaKnown RBP11.29□□□□□ -0.6
MSH5-213ENST00000468136 DYDC2Q96IM9 177 aa11.29□□□□□ -0.6
MSH5-213ENST00000468136 PRIMPOLQ96LW4 560 aa11.29□□□□□ -0.6
MSH5-213ENST00000468136 TUBGCP2Q9BSJ2 902 aa11.29□□□□□ -0.6
MSH5-213ENST00000468136 EDEM3Q9BZQ6 932 aa11.29□□□□□ -0.6
MSH5-213ENST00000468136 BHMT2Q9H2M3 363 aa11.29□□□□□ -0.6
MSH5-213ENST00000468136 PARVGQ9HBI0 331 aa11.29□□□□□ -0.6
MSH5-213ENST00000468136 HOMER2Q9NSB8 354 aa11.29□□□□□ -0.6
MSH5-213ENST00000468136 CGNQ9P2M7 1197 aaKnown RBP11.29□□□□□ -0.6
MSH5-213ENST00000468136 TRAF3IP3Q9Y228 551 aa11.29□□□□□ -0.6
MSH5-213ENST00000468136 PARP14Q460N5 1801 aa11.29□□□□□ -0.6
MSH5-213ENST00000468136 CETN3O15182 167 aa11.28□□□□□ -0.6
MSH5-213ENST00000468136 TGFB3P10600 412 aa11.28□□□□□ -0.6
MSH5-213ENST00000468136 EIF2AK2P19525 551 aaKnown RBP11.28□□□□□ -0.6
MSH5-213ENST00000468136 MTIF2P46199 727 aaKnown RBP11.28□□□□□ -0.6
MSH5-213ENST00000468136 ZNF131P52739 623 aa11.28□□□□□ -0.6
MSH5-213ENST00000468136 UBXN1Q04323 297 aa11.28□□□□□ -0.6
MSH5-213ENST00000468136 HSP90AA2PQ14568 343 aaPredicted RBP11.28□□□□□ -0.6
MSH5-213ENST00000468136 STXBP2Q15833 593 aa11.28□□□□□ -0.6
MSH5-213ENST00000468136 MAN2A1Q16706 1144 aa11.28□□□□□ -0.6
MSH5-213ENST00000468136 ZCWPW2Q504Y3 356 aa11.28□□□□□ -0.6
MSH5-213ENST00000468136 ARSHQ5FYA8 562 aa11.28□□□□□ -0.6
MSH5-213ENST00000468136 DNTTIP2Q5QJE6 756 aaKnown RBP11.28□□□□□ -0.6
MSH5-213ENST00000468136 RINT1Q6NUQ1 792 aa11.28□□□□□ -0.6
MSH5-213ENST00000468136 SLC30A10Q6XR72 485 aa11.28□□□□□ -0.6
MSH5-213ENST00000468136 C1orf186Q6ZWK4 172 aa11.28□□□□□ -0.6
MSH5-213ENST00000468136 OTUD6AQ7L8S5 288 aa11.28□□□□□ -0.6
MSH5-213ENST00000468136 IRF2BP1Q8IU81 584 aa11.28□□□□□ -0.6
MSH5-213ENST00000468136 SHCBP1Q8NEM2 672 aa11.28□□□□□ -0.6
MSH5-213ENST00000468136 TMEM174Q8WUU8 243 aa11.28□□□□□ -0.6
MSH5-213ENST00000468136 ATP6V0A1Q93050 837 aa11.28□□□□□ -0.6
MSH5-213ENST00000468136 CNOT6LQ96LI5 555 aaKnown RBP11.28□□□□□ -0.6
MSH5-213ENST00000468136 ERGIC2Q96RQ1 377 aa11.28□□□□□ -0.6
MSH5-213ENST00000468136 BAG1Q99933 345 aaPredicted RBP11.28□□□□□ -0.6
MSH5-213ENST00000468136 LXNQ9BS40 222 aa11.28□□□□□ -0.6
MSH5-213ENST00000468136 SPATC1LQ9H0A9 340 aa11.28□□□□□ -0.6
MSH5-213ENST00000468136 SEMA6BQ9H3T3 888 aa11.28□□□□□ -0.6
MSH5-213ENST00000468136 C17orf75Q9HAS0 396 aa11.28□□□□□ -0.6
MSH5-213ENST00000468136 METTL14Q9HCE5 456 aaKnown RBP11.28□□□□□ -0.6
MSH5-213ENST00000468136 A1CFQ9NQ94 594 aaKnown RBP11.28□□□□□ -0.6
MSH5-213ENST00000468136 LARSQ9P2J5 1176 aaKnown RBP11.28□□□□□ -0.6
MSH5-213ENST00000468136 PYCARDQ9ULZ3 195 aa11.28□□□□□ -0.6
MSH5-213ENST00000468136 MAPK8IP1Q9UQF2 711 aa11.28□□□□□ -0.6
MSH5-213ENST00000468136 PPME1Q9Y570 386 aa11.28□□□□□ -0.6
MSH5-213ENST00000468136 PCDHB13Q9Y5F0 798 aa11.28□□□□□ -0.6
MSH5-213ENST00000468136 RLFQ13129 1914 aa11.28□□□□□ -0.6
MSH5-213ENST00000468136 WDR90Q96KV7 1748 aa11.28□□□□□ -0.6
MSH5-213ENST00000468136 PAPPA2Q9BXP8 1791 aa11.28□□□□□ -0.6
MSH5-213ENST00000468136 POLR2AP24928 1970 aaKnown RBP11.27□□□□□ -0.61
MSH5-213ENST00000468136 LOC285556D6RIA3 1793 aa11.27□□□□□ -0.61
MSH5-213ENST00000468136 A0A1W2PQJ5 194 aa11.27□□□□□ -0.61
MSH5-213ENST00000468136 MYCLP12524 364 aaPredicted RBP11.27□□□□□ -0.61
MSH5-213ENST00000468136 TAL1P17542 331 aaPredicted RBP11.27□□□□□ -0.61
MSH5-213ENST00000468136 FECHP22830 423 aa11.27□□□□□ -0.61
MSH5-213ENST00000468136 CYP4A11Q02928 519 aa11.27□□□□□ -0.61
MSH5-213ENST00000468136 LRMPQ12912 555 aa11.27□□□□□ -0.61
MSH5-213ENST00000468136 KNOP1Q1ED39 458 aaKnown RBP11.27□□□□□ -0.61
MSH5-213ENST00000468136 GADL1Q6ZQY3 521 aa11.27□□□□□ -0.61
MSH5-213ENST00000468136 EPM2AIP1Q7L775 607 aaPredicted RBP11.27□□□□□ -0.61
MSH5-213ENST00000468136 TMTC1Q8IUR5 882 aa11.27□□□□□ -0.61
MSH5-213ENST00000468136 ANKRD35Q8N283 1001 aa11.27□□□□□ -0.61
MSH5-213ENST00000468136 ZNF397Q8NF99 534 aaPredicted RBP11.27□□□□□ -0.61
MSH5-213ENST00000468136 ZNF507Q8TCN5 953 aa11.27□□□□□ -0.61
MSH5-213ENST00000468136 GJA10Q969M2 543 aa11.27□□□□□ -0.61
MSH5-213ENST00000468136 DRC1Q96MC2 740 aa11.27□□□□□ -0.61
MSH5-213ENST00000468136 CCDC43Q96MW1 224 aaKnown RBP11.27□□□□□ -0.61
MSH5-213ENST00000468136 REEP2Q9BRK0 252 aa11.27□□□□□ -0.61
MSH5-213ENST00000468136 NOC4LQ9BVI4 516 aaKnown RBP11.27□□□□□ -0.61
MSH5-213ENST00000468136 MOV10L1Q9BXT6 1211 aaKnown RBP11.27□□□□□ -0.61
MSH5-213ENST00000468136 NUCKS1Q9H1E3 243 aaKnown RBP11.27□□□□□ -0.61
MSH5-213ENST00000468136 MROH8Q9H579 483 aa11.27□□□□□ -0.61
MSH5-213ENST00000468136 ELP3Q9H9T3 547 aa11.27□□□□□ -0.61
MSH5-213ENST00000468136 TYW1Q9NV66 732 aaKnown RBP11.27□□□□□ -0.61
MSH5-213ENST00000468136 RGL1Q9NZL6 768 aa11.27□□□□□ -0.61
MSH5-213ENST00000468136 DAAM1Q9Y4D1 1078 aa11.27□□□□□ -0.61
MSH5-213ENST00000468136 RIPK3Q9Y572 518 aa11.27□□□□□ -0.61
MSH5-213ENST00000468136 PAXBP1Q9Y5B6 917 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms