RNA–Protein interactions for RNA: ENST00000466410.5

LIMS2-212, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-212ENST00000466410 G3V3G9 751 aa21.28■■□□□ 1
LIMS2-212ENST00000466410 SPATA31C1P0DKV0 1188 aa21.28■■□□□ 1
LIMS2-212ENST00000466410 HOXD13P35453 343 aa21.28■■□□□ 1
LIMS2-212ENST00000466410 EPHB4P54760 987 aa21.28■■□□□ 1
LIMS2-212ENST00000466410 ASIC2Q16515 512 aa21.28■■□□□ 1
LIMS2-212ENST00000466410 CERKLQ49MI3 558 aaPredicted RBP21.28■■□□□ 1
LIMS2-212ENST00000466410 DCAF8Q5TAQ9 597 aa21.28■■□□□ 1
LIMS2-212ENST00000466410 SRLQ86TD4 932 aa21.28■■□□□ 1
LIMS2-212ENST00000466410 REEP2Q9BRK0 252 aa21.28■■□□□ 1
LIMS2-212ENST00000466410 HDAC9Q9UKV0 1011 aa21.28■■□□□ 1
LIMS2-212ENST00000466410 GOLGA6CA6NDK9 693 aa21.28■■□□□ 1
LIMS2-212ENST00000466410 SLC26A4O43511 780 aa21.28■■□□□ 1
LIMS2-212ENST00000466410 GOLGA6DP0CG33 693 aa21.28■■□□□ 1
LIMS2-212ENST00000466410 TAL1P17542 331 aaPredicted RBP21.28■■□□□ 1
LIMS2-212ENST00000466410 SLC9A1P19634 815 aa21.28■■□□□ 1
LIMS2-212ENST00000466410 AP3B2Q13367 1082 aa21.28■■□□□ 1
LIMS2-212ENST00000466410 SLC27A3Q5K4L6 730 aa21.28■■□□□ 1
LIMS2-212ENST00000466410 MOXD1Q6UVY6 613 aa21.28■■□□□ 1
LIMS2-212ENST00000466410 SFR1Q86XK3 245 aa21.28■■□□□ 1
LIMS2-212ENST00000466410 LENG9Q96B70 501 aa21.28■■□□□ 1
LIMS2-212ENST00000466410 PLEKHA4Q9H4M7 779 aa21.28■■□□□ 1
LIMS2-212ENST00000466410 GOLGA6AQ9NYA3 693 aa21.28■■□□□ 1
LIMS2-212ENST00000466410 NYAP2Q9P242 653 aa21.28■■□□□ 1
LIMS2-212ENST00000466410 FEZ2Q9UHY8 353 aaPredicted RBP21.28■■□□□ 1
LIMS2-212ENST00000466410 RRP15Q9Y3B9 282 aaKnown RBP21.28■■□□□ 1
LIMS2-212ENST00000466410 PCDHGC5Q9Y5F6 944 aa21.28■■□□□ 1
LIMS2-212ENST00000466410 ANKRD31Q8N7Z5 1873 aa21.27■■□□□ 1
LIMS2-212ENST00000466410 MYO1CO00159 1063 aa21.27■■□□□ 1
LIMS2-212ENST00000466410 GLI1P08151 1106 aa21.27■■□□□ 1
LIMS2-212ENST00000466410 USH1GQ495M9 461 aa21.27■■□□□ 1
LIMS2-212ENST00000466410 DPY19L2P1Q6NXN4 242 aa21.27■■□□□ 1
LIMS2-212ENST00000466410 FAM76AQ8TAV0 307 aa21.27■■□□□ 1
LIMS2-212ENST00000466410 SIPA1L1O43166 1804 aa21.27■■□□□ 1
LIMS2-212ENST00000466410 FAM86B1E9PN63 330 aa21.27■□□□□ 0.99
LIMS2-212ENST00000466410 FAM86B2P0C5J1 330 aa21.27■□□□□ 0.99
LIMS2-212ENST00000466410 MEI1Q5TIA1 1274 aa21.27■□□□□ 0.99
LIMS2-212ENST00000466410 EMBQ6PCB8 327 aa21.27■□□□□ 0.99
LIMS2-212ENST00000466410 BCAS3Q9H6U6 928 aa21.27■□□□□ 0.99
LIMS2-212ENST00000466410 POLD4Q9HCU8 107 aa21.27■□□□□ 0.99
LIMS2-212ENST00000466410 RNF14Q9UBS8 474 aa21.27■□□□□ 0.99
LIMS2-212ENST00000466410 DNM3Q9UQ16 869 aa21.27■□□□□ 0.99
LIMS2-212ENST00000466410 ZSCAN5CA6NGD5 496 aaPredicted RBP21.26■□□□□ 0.99
LIMS2-212ENST00000466410 TRIM66O15016 1216 aa21.26■□□□□ 0.99
LIMS2-212ENST00000466410 RPA1P27694 616 aa21.26■□□□□ 0.99
LIMS2-212ENST00000466410 PTK2Q05397 1052 aa21.26■□□□□ 0.99
LIMS2-212ENST00000466410 KNOP1Q1ED39 458 aaKnown RBP21.26■□□□□ 0.99
LIMS2-212ENST00000466410 SH3BP5LQ7L8J4 393 aa21.26■□□□□ 0.99
LIMS2-212ENST00000466410 KIAA0825Q8IV33 1275 aa21.26■□□□□ 0.99
LIMS2-212ENST00000466410 SYT2Q8N9I0 419 aaPredicted RBP21.26■□□□□ 0.99
LIMS2-212ENST00000466410 DBNDD1Q9H9R9 158 aa21.26■□□□□ 0.99
LIMS2-212ENST00000466410 ARMCX3Q9UH62 379 aaPredicted RBP21.26■□□□□ 0.99
LIMS2-212ENST00000466410 TRAF3IP3Q9Y228 551 aa21.26■□□□□ 0.99
LIMS2-212ENST00000466410 MYBP10242 640 aa21.26■□□□□ 0.99
LIMS2-212ENST00000466410 TNFRSF8P28908 595 aa21.26■□□□□ 0.99
LIMS2-212ENST00000466410 GLE1Q53GS7 698 aaKnown RBP21.26■□□□□ 0.99
LIMS2-212ENST00000466410 IRF2BP2Q7Z5L9 587 aa21.26■□□□□ 0.99
LIMS2-212ENST00000466410 ZDHHC15Q96MV8 337 aa21.26■□□□□ 0.99
LIMS2-212ENST00000466410 FAM198AQ9UFP1 575 aa21.26■□□□□ 0.99
LIMS2-212ENST00000466410 GRID2IPA4D2P6 1211 aa21.25■□□□□ 0.99
LIMS2-212ENST00000466410 RSPH10B2B2RC85 870 aa21.25■□□□□ 0.99
LIMS2-212ENST00000466410 F5H6K3 240 aa21.25■□□□□ 0.99
LIMS2-212ENST00000466410 RSPH10BP0C881 870 aa21.25■□□□□ 0.99
LIMS2-212ENST00000466410 RNASE9P60153 205 aaKnown RBP21.25■□□□□ 0.99
LIMS2-212ENST00000466410 KLRC3Q07444 240 aa21.25■□□□□ 0.99
LIMS2-212ENST00000466410 EPM2AIP1Q7L775 607 aaPredicted RBP21.25■□□□□ 0.99
LIMS2-212ENST00000466410 SH3GL2Q99962 352 aa21.25■□□□□ 0.99
LIMS2-212ENST00000466410 AMNQ9BXJ7 453 aa21.25■□□□□ 0.99
LIMS2-212ENST00000466410 RSPH14Q9UHP6 348 aa21.25■□□□□ 0.99
LIMS2-212ENST00000466410 ESYT3A0FGR9 886 aa21.25■□□□□ 0.99
LIMS2-212ENST00000466410 UCHL3P15374 230 aa21.25■□□□□ 0.99
LIMS2-212ENST00000466410 CARSP49589 748 aaKnown RBP21.25■□□□□ 0.99
LIMS2-212ENST00000466410 CYP4A11Q02928 519 aa21.25■□□□□ 0.99
LIMS2-212ENST00000466410 ICA1Q05084 483 aa21.25■□□□□ 0.99
LIMS2-212ENST00000466410 Q4G0T1 1027 aa21.25■□□□□ 0.99
LIMS2-212ENST00000466410 ZNF571Q7Z3V5 609 aaPredicted RBP21.25■□□□□ 0.99
LIMS2-212ENST00000466410 FRMD5Q7Z6J6 570 aa21.25■□□□□ 0.99
LIMS2-212ENST00000466410 ERMNQ8TAM6 284 aa21.25■□□□□ 0.99
LIMS2-212ENST00000466410 CAVIN3Q969G5 261 aa21.25■□□□□ 0.99
LIMS2-212ENST00000466410 INPP4AQ96PE3 977 aaPredicted RBP21.25■□□□□ 0.99
LIMS2-212ENST00000466410 PI4KBQ9UBF8 816 aa21.25■□□□□ 0.99
LIMS2-212ENST00000466410 DNAAF5Q86Y56 855 aa21.24■□□□□ 0.99
LIMS2-212ENST00000466410 CYP2W1Q8TAV3 490 aa21.24■□□□□ 0.99
LIMS2-212ENST00000466410 TBX3O15119 743 aa21.24■□□□□ 0.99
LIMS2-212ENST00000466410 AKAP3O75969 853 aa21.24■□□□□ 0.99
LIMS2-212ENST00000466410 HEXIM1O94992 359 aaKnown RBP21.24■□□□□ 0.99
LIMS2-212ENST00000466410 GDF11O95390 407 aa21.24■□□□□ 0.99
LIMS2-212ENST00000466410 AFPP02771 609 aaKnown RBP21.24■□□□□ 0.99
LIMS2-212ENST00000466410 PON1P27169 355 aa21.24■□□□□ 0.99
LIMS2-212ENST00000466410 FBXO11Q86XK2 927 aa21.24■□□□□ 0.99
LIMS2-212ENST00000466410 C10orf67Q8IYJ2 551 aa21.24■□□□□ 0.99
LIMS2-212ENST00000466410 SPAG5Q96R06 1193 aa21.24■□□□□ 0.99
LIMS2-212ENST00000466410 EPB41L5Q9HCM4 733 aa21.24■□□□□ 0.99
LIMS2-212ENST00000466410 GDF3Q9NR23 364 aa21.24■□□□□ 0.99
LIMS2-212ENST00000466410 NFU1Q9UMS0 254 aa21.24■□□□□ 0.99
LIMS2-212ENST00000466410 SPDYE3A6NKU9 549 aa21.23■□□□□ 0.99
LIMS2-212ENST00000466410 SHOX2O60902 331 aaPredicted RBP21.23■□□□□ 0.99
LIMS2-212ENST00000466410 NPR1P16066 1061 aa21.23■□□□□ 0.99
LIMS2-212ENST00000466410 SREBF1P36956 1147 aa21.23■□□□□ 0.99
LIMS2-212ENST00000466410 RBM5P52756 815 aaKnown RBP eCLIP21.23■□□□□ 0.99
LIMS2-212ENST00000466410 GUCY2DQ02846 1103 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms