RNA–Protein interactions for RNA: ENST00000463209.1

TMEM254-208, Transcript of transmembrane protein 254, humanhuman

TSL 3

Gene TMEM254, Length 407 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-208ENST00000463209 HOXC8P31273 242 aa9.78□□□□□ -0.84
TMEM254-208ENST00000463209 TMEM62Q0P6H9 643 aa9.78□□□□□ -0.84
TMEM254-208ENST00000463209 PLCB4Q15147 1175 aa9.78□□□□□ -0.84
TMEM254-208ENST00000463209 LETM2Q2VYF4 491 aa9.78□□□□□ -0.84
TMEM254-208ENST00000463209 MARCH8Q5T0T0 291 aa9.78□□□□□ -0.84
TMEM254-208ENST00000463209 RASIP1Q5U651 963 aa9.78□□□□□ -0.84
TMEM254-208ENST00000463209 PIK3AP1Q6ZUJ8 805 aa9.78□□□□□ -0.84
TMEM254-208ENST00000463209 NIPA1Q7RTP0 329 aa9.78□□□□□ -0.84
TMEM254-208ENST00000463209 CCDC155Q8N6L0 562 aa9.78□□□□□ -0.84
TMEM254-208ENST00000463209 DAGLBQ8NCG7 672 aa9.78□□□□□ -0.84
TMEM254-208ENST00000463209 AFAP1L1Q8TED9 768 aa9.78□□□□□ -0.84
TMEM254-208ENST00000463209 HERVK_113Q902F9 699 aa9.78□□□□□ -0.84
TMEM254-208ENST00000463209 GUCD1Q96NT3 240 aa9.78□□□□□ -0.84
TMEM254-208ENST00000463209 PBX4Q9BYU1 374 aa9.78□□□□□ -0.84
TMEM254-208ENST00000463209 FAM49AQ9H0Q0 323 aaPredicted RBP9.78□□□□□ -0.84
TMEM254-208ENST00000463209 ERAP1Q9NZ08 941 aa9.78□□□□□ -0.84
TMEM254-208ENST00000463209 YBX2Q9Y2T7 364 aaKnown RBP9.78□□□□□ -0.84
TMEM254-208ENST00000463209 LAMA2P24043 3122 aaKnown RBP9.78□□□□□ -0.84
TMEM254-208ENST00000463209 WDR81Q562E7 1941 aa9.78□□□□□ -0.84
TMEM254-208ENST00000463209 CCDC194A0A1B0GVG4 234 aa9.77□□□□□ -0.85
TMEM254-208ENST00000463209 WNT7AO00755 349 aa9.77□□□□□ -0.85
TMEM254-208ENST00000463209 MAFGO15525 162 aa9.77□□□□□ -0.85
TMEM254-208ENST00000463209 INSRRP14616 1297 aa9.77□□□□□ -0.85
TMEM254-208ENST00000463209 DNAJB2P25686 324 aa9.77□□□□□ -0.85
TMEM254-208ENST00000463209 CIITAP33076 1130 aa9.77□□□□□ -0.85
TMEM254-208ENST00000463209 RBM25P49756 843 aaKnown RBP9.77□□□□□ -0.85
TMEM254-208ENST00000463209 STAT5BP51692 787 aa9.77□□□□□ -0.85
TMEM254-208ENST00000463209 SMAD3P84022 425 aaKnown RBP9.77□□□□□ -0.85
TMEM254-208ENST00000463209 SETQ01105 290 aaPredicted RBP9.77□□□□□ -0.85
TMEM254-208ENST00000463209 NONOQ15233 471 aaKnown RBP eCLIP9.77□□□□□ -0.85
TMEM254-208ENST00000463209 UGCGQ16739 394 aa9.77□□□□□ -0.85
TMEM254-208ENST00000463209 ZNF697Q5TEC3 545 aa9.77□□□□□ -0.85
TMEM254-208ENST00000463209 SWSAP1Q6NVH7 229 aa9.77□□□□□ -0.85
TMEM254-208ENST00000463209 FAM117BQ6P1L5 589 aa9.77□□□□□ -0.85
TMEM254-208ENST00000463209 ABHD15Q6UXT9 468 aa9.77□□□□□ -0.85
TMEM254-208ENST00000463209 RPUSD2Q8IZ73 545 aaKnown RBP9.77□□□□□ -0.85
TMEM254-208ENST00000463209 CAGE1Q8TC20 777 aa9.77□□□□□ -0.85
TMEM254-208ENST00000463209 PPP1R16BQ96T49 567 aa9.77□□□□□ -0.85
TMEM254-208ENST00000463209 NKX2-4Q9H2Z4 354 aa9.77□□□□□ -0.85
TMEM254-208ENST00000463209 UNC45AQ9H3U1 944 aa9.77□□□□□ -0.85
TMEM254-208ENST00000463209 SMARCAD1Q9H4L7 1026 aa9.77□□□□□ -0.85
TMEM254-208ENST00000463209 AZI2Q9H6S1 392 aa9.77□□□□□ -0.85
TMEM254-208ENST00000463209 ZNF302Q9NR11 478 aa9.77□□□□□ -0.85
TMEM254-208ENST00000463209 LIMCH1Q9UPQ0 1083 aa9.77□□□□□ -0.85
TMEM254-208ENST00000463209 SAMM50Q9Y512 469 aa9.77□□□□□ -0.85
TMEM254-208ENST00000463209 GTF3C3Q9Y5Q9 886 aa9.77□□□□□ -0.85
TMEM254-208ENST00000463209 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.76□□□□□ -0.85
TMEM254-208ENST00000463209 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.76□□□□□ -0.85
TMEM254-208ENST00000463209 TMEM150BA6NC51 233 aa9.76□□□□□ -0.85
TMEM254-208ENST00000463209 RSPH10B2B2RC85 870 aa9.76□□□□□ -0.85
TMEM254-208ENST00000463209 BTBD18B2RXH4 712 aa9.76□□□□□ -0.85
TMEM254-208ENST00000463209 RSPH10BP0C881 870 aa9.76□□□□□ -0.85
TMEM254-208ENST00000463209 ATP2A2P16615 1042 aaKnown RBP9.76□□□□□ -0.85
TMEM254-208ENST00000463209 ATP4AP20648 1035 aa9.76□□□□□ -0.85
TMEM254-208ENST00000463209 RFC2P35250 354 aa9.76□□□□□ -0.85
TMEM254-208ENST00000463209 KRT2P35908 639 aa9.76□□□□□ -0.85
TMEM254-208ENST00000463209 ADAM17P78536 824 aa9.76□□□□□ -0.85
TMEM254-208ENST00000463209 DEFB103AP81534 67 aa9.76□□□□□ -0.85
TMEM254-208ENST00000463209 RBL2Q08999 1139 aa9.76□□□□□ -0.85
TMEM254-208ENST00000463209 LRCH2Q5VUJ6 765 aa9.76□□□□□ -0.85
TMEM254-208ENST00000463209 KRT40Q6A162 431 aa9.76□□□□□ -0.85
TMEM254-208ENST00000463209 MCTP2Q6DN12 878 aa9.76□□□□□ -0.85
TMEM254-208ENST00000463209 MIS18BP1Q6P0N0 1132 aa9.76□□□□□ -0.85
TMEM254-208ENST00000463209 KRT25Q7Z3Z0 450 aa9.76□□□□□ -0.85
TMEM254-208ENST00000463209 SPRED2Q7Z698 418 aa9.76□□□□□ -0.85
TMEM254-208ENST00000463209 TEX2Q8IWB9 1127 aa9.76□□□□□ -0.85
TMEM254-208ENST00000463209 CKAP2LQ8IYA6 745 aa9.76□□□□□ -0.85
TMEM254-208ENST00000463209 DNAJB3Q8WWF6 145 aa9.76□□□□□ -0.85
TMEM254-208ENST00000463209 MYLIPQ8WY64 445 aa9.76□□□□□ -0.85
TMEM254-208ENST00000463209 SLC5A5Q92911 643 aa9.76□□□□□ -0.85
TMEM254-208ENST00000463209 MTMR10Q9NXD2 777 aa9.76□□□□□ -0.85
TMEM254-208ENST00000463209 GABBR1Q9UBS5 961 aa9.76□□□□□ -0.85
TMEM254-208ENST00000463209 DDX25Q9UHL0 483 aaKnown RBP9.76□□□□□ -0.85
TMEM254-208ENST00000463209 TCEAL9Q9UHQ7 104 aa9.76□□□□□ -0.85
TMEM254-208ENST00000463209 TUBE1Q9UJT0 475 aa9.76□□□□□ -0.85
TMEM254-208ENST00000463209 SLC4A7Q9Y6M7 1214 aa9.76□□□□□ -0.85
TMEM254-208ENST00000463209 NRCAMQ92823 1304 aa9.76□□□□□ -0.85
TMEM254-208ENST00000463209 KAT6AQ92794 2004 aa9.75□□□□□ -0.85
TMEM254-208ENST00000463209 IGKV6D-21A0A0A0MT36 114 aa9.75□□□□□ -0.85
TMEM254-208ENST00000463209 POTEB3A0JP26 581 aa9.75□□□□□ -0.85
TMEM254-208ENST00000463209 CCNT1O60563 726 aaKnown RBP9.75□□□□□ -0.85
TMEM254-208ENST00000463209 EIF5BO60841 1220 aaKnown RBP9.75□□□□□ -0.85
TMEM254-208ENST00000463209 GAS7O60861 476 aa9.75□□□□□ -0.85
TMEM254-208ENST00000463209 ARHGEF15O94989 841 aa9.75□□□□□ -0.85
TMEM254-208ENST00000463209 ATG7O95352 703 aa9.75□□□□□ -0.85
TMEM254-208ENST00000463209 CHRNA1P02708 482 aa9.75□□□□□ -0.85
TMEM254-208ENST00000463209 MMP1P03956 469 aa9.75□□□□□ -0.85
TMEM254-208ENST00000463209 GHRP10912 638 aa9.75□□□□□ -0.85
TMEM254-208ENST00000463209 ATP2B1P20020 1258 aa9.75□□□□□ -0.85
TMEM254-208ENST00000463209 USP11P51784 963 aa9.75□□□□□ -0.85
TMEM254-208ENST00000463209 WDR5P61964 334 aaKnown RBP9.75□□□□□ -0.85
TMEM254-208ENST00000463209 Q4G0T1 1027 aa9.75□□□□□ -0.85
TMEM254-208ENST00000463209 FAM160B1Q5W0V3 765 aa9.75□□□□□ -0.85
TMEM254-208ENST00000463209 PDXDC2PQ6P474 469 aa9.75□□□□□ -0.85
TMEM254-208ENST00000463209 POTEBQ6S5H4 581 aa9.75□□□□□ -0.85
TMEM254-208ENST00000463209 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.75□□□□□ -0.85
TMEM254-208ENST00000463209 NEK8Q86SG6 692 aa9.75□□□□□ -0.85
TMEM254-208ENST00000463209 DIS3L2Q8IYB7 885 aaKnown RBP9.75□□□□□ -0.85
TMEM254-208ENST00000463209 ETNPPLQ8TBG4 499 aa9.75□□□□□ -0.85
TMEM254-208ENST00000463209 WASF1Q92558 559 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms