RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 FRMD3A2A2Y4 597 aa16.06■□□□□ 0.16
HDAC6-213ENST00000462730 LGALS16A8MUM7 142 aa16.06■□□□□ 0.16
HDAC6-213ENST00000462730 PES1O00541 588 aaKnown RBP16.06■□□□□ 0.16
HDAC6-213ENST00000462730 BCRP11274 1271 aa16.06■□□□□ 0.16
HDAC6-213ENST00000462730 TNNT1P13805 278 aa16.06■□□□□ 0.16
HDAC6-213ENST00000462730 CBX1P83916 185 aa16.06■□□□□ 0.16
HDAC6-213ENST00000462730 UBXN1Q04323 297 aa16.06■□□□□ 0.16
HDAC6-213ENST00000462730 DMTNQ08495 405 aa16.06■□□□□ 0.16
HDAC6-213ENST00000462730 RBL2Q08999 1139 aa16.06■□□□□ 0.16
HDAC6-213ENST00000462730 HERC4Q5GLZ8 1057 aaPredicted RBP16.06■□□□□ 0.16
HDAC6-213ENST00000462730 ARHGEF16Q5VV41 709 aa16.06■□□□□ 0.16
HDAC6-213ENST00000462730 TMEM139Q8IV31 216 aa16.06■□□□□ 0.16
HDAC6-213ENST00000462730 EEF2KMTQ96G04 330 aa16.06■□□□□ 0.16
HDAC6-213ENST00000462730 RIT2Q99578 217 aa16.06■□□□□ 0.16
HDAC6-213ENST00000462730 TSG101Q99816 390 aa16.06■□□□□ 0.16
HDAC6-213ENST00000462730 FGFBP2Q9BYJ0 223 aa16.06■□□□□ 0.16
HDAC6-213ENST00000462730 BHMT2Q9H2M3 363 aa16.06■□□□□ 0.16
HDAC6-213ENST00000462730 KCND1Q9NSA2 647 aa16.06■□□□□ 0.16
HDAC6-213ENST00000462730 CYP39A1Q9NYL5 469 aa16.06■□□□□ 0.16
HDAC6-213ENST00000462730 DDX39AO00148 427 aaKnown RBP16.06■□□□□ 0.16
HDAC6-213ENST00000462730 ZSCAN20P17040 1043 aaPredicted RBP16.06■□□□□ 0.16
HDAC6-213ENST00000462730 MTIF2P46199 727 aaKnown RBP16.06■□□□□ 0.16
HDAC6-213ENST00000462730 HERVK_113P62684 666 aa16.06■□□□□ 0.16
HDAC6-213ENST00000462730 LRRC63Q05C16 580 aa16.06■□□□□ 0.16
HDAC6-213ENST00000462730 GIT2Q14161 759 aa16.06■□□□□ 0.16
HDAC6-213ENST00000462730 SYCP1Q15431 976 aa16.06■□□□□ 0.16
HDAC6-213ENST00000462730 CEP135Q66GS9 1140 aa16.06■□□□□ 0.16
HDAC6-213ENST00000462730 E4F1Q66K89 784 aaPredicted RBP16.06■□□□□ 0.16
HDAC6-213ENST00000462730 FASTKD5Q7L8L6 764 aaKnown RBP16.06■□□□□ 0.16
HDAC6-213ENST00000462730 KCTD17Q8N5Z5 321 aa16.06■□□□□ 0.16
HDAC6-213ENST00000462730 CPLX3Q8WVH0 158 aa16.06■□□□□ 0.16
HDAC6-213ENST00000462730 SLC10A4Q96EP9 437 aa16.06■□□□□ 0.16
HDAC6-213ENST00000462730 BAG1Q99933 345 aaPredicted RBP16.06■□□□□ 0.16
HDAC6-213ENST00000462730 REEP2Q9BRK0 252 aa16.06■□□□□ 0.16
HDAC6-213ENST00000462730 KCNH7Q9NS40 1196 aa16.06■□□□□ 0.16
HDAC6-213ENST00000462730 PAXBP1Q9Y5B6 917 aa16.06■□□□□ 0.16
HDAC6-213ENST00000462730 PCDHA2Q9Y5H9 948 aa16.06■□□□□ 0.16
HDAC6-213ENST00000462730 SLITRK3O94933 977 aa16.05■□□□□ 0.16
HDAC6-213ENST00000462730 MYCLP12524 364 aaPredicted RBP16.05■□□□□ 0.16
HDAC6-213ENST00000462730 NCBP1Q09161 790 aaKnown RBP16.05■□□□□ 0.16
HDAC6-213ENST00000462730 SNAPC2Q13487 334 aa16.05■□□□□ 0.16
HDAC6-213ENST00000462730 EPHA7Q15375 998 aa16.05■□□□□ 0.16
HDAC6-213ENST00000462730 B3GNT9Q6UX72 402 aa16.05■□□□□ 0.16
HDAC6-213ENST00000462730 CHST13Q8NET6 341 aa16.05■□□□□ 0.16
HDAC6-213ENST00000462730 TUBGCP2Q9BSJ2 902 aa16.05■□□□□ 0.16
HDAC6-213ENST00000462730 PAGR1Q9BTK6 254 aa16.05■□□□□ 0.16
HDAC6-213ENST00000462730 RUSC1Q9BVN2 902 aa16.05■□□□□ 0.16
HDAC6-213ENST00000462730 SPATC1LQ9H0A9 340 aa16.05■□□□□ 0.16
HDAC6-213ENST00000462730 GBA2Q9HCG7 927 aaPredicted RBP16.05■□□□□ 0.16
HDAC6-213ENST00000462730 AGO4Q9HCK5 861 aaKnown RBP16.05■□□□□ 0.16
HDAC6-213ENST00000462730 NMRK2Q9NPI5 230 aa16.05■□□□□ 0.16
HDAC6-213ENST00000462730 JADE2Q9NQC1 790 aa16.05■□□□□ 0.16
HDAC6-213ENST00000462730 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.05■□□□□ 0.168e-7■■■□□ 18.4
HDAC6-213ENST00000462730 UNCXA6NJT0 531 aa16.04■□□□□ 0.16
HDAC6-213ENST00000462730 MFAP3LO75121 409 aa16.04■□□□□ 0.16
HDAC6-213ENST00000462730 TPM1P09493 284 aa16.04■□□□□ 0.16
HDAC6-213ENST00000462730 MTMR1Q13613 665 aa16.04■□□□□ 0.16
HDAC6-213ENST00000462730 PIGOQ8TEQ8 1089 aa16.04■□□□□ 0.16
HDAC6-213ENST00000462730 PANX2Q96RD6 677 aa16.04■□□□□ 0.16
HDAC6-213ENST00000462730 B4DLN1 442 aa16.04■□□□□ 0.16
HDAC6-213ENST00000462730 ARHGAP6O43182 974 aa16.04■□□□□ 0.16
HDAC6-213ENST00000462730 KIF20AO95235 890 aa16.04■□□□□ 0.16
HDAC6-213ENST00000462730 CELF2O95319 508 aaKnown RBP16.04■□□□□ 0.16
HDAC6-213ENST00000462730 FGFR1OPO95684 399 aaKnown RBP16.04■□□□□ 0.16
HDAC6-213ENST00000462730 GYPCP04921 128 aa16.04■□□□□ 0.16
HDAC6-213ENST00000462730 CASP14P31944 242 aa16.04■□□□□ 0.16
HDAC6-213ENST00000462730 FKBP1BP68106 108 aa16.04■□□□□ 0.16
HDAC6-213ENST00000462730 TRIM14Q14142 442 aa16.04■□□□□ 0.16
HDAC6-213ENST00000462730 GPAT2Q6NUI2 795 aa16.04■□□□□ 0.16
HDAC6-213ENST00000462730 MIER3Q7Z3K6 550 aa16.04■□□□□ 0.16
HDAC6-213ENST00000462730 SFR1Q86XK3 245 aa16.04■□□□□ 0.16
HDAC6-213ENST00000462730 RIOX2Q8IUF8 465 aa16.04■□□□□ 0.16
HDAC6-213ENST00000462730 ZNF507Q8TCN5 953 aa16.04■□□□□ 0.16
HDAC6-213ENST00000462730 ZNF526Q8TF50 670 aaPredicted RBP16.04■□□□□ 0.16
HDAC6-213ENST00000462730 TBCAO75347 108 aaKnown RBP16.03■□□□□ 0.16
HDAC6-213ENST00000462730 CNMDO75829 334 aa16.03■□□□□ 0.16
HDAC6-213ENST00000462730 MUTP22033 750 aa16.03■□□□□ 0.16
HDAC6-213ENST00000462730 ITGB3BPQ13352 177 aaPredicted RBP16.03■□□□□ 0.16
HDAC6-213ENST00000462730 FOXR2Q6PJQ5 311 aa16.03■□□□□ 0.16
HDAC6-213ENST00000462730 NELFCDQ8IXH7 590 aa16.03■□□□□ 0.16
HDAC6-213ENST00000462730 NSUN6Q8TEA1 469 aaKnown RBP16.03■□□□□ 0.16
HDAC6-213ENST00000462730 PPP1R13BQ96KQ4 1090 aa16.03■□□□□ 0.16
HDAC6-213ENST00000462730 TESPA1A2RU30 521 aaPredicted RBP16.02■□□□□ 0.16
HDAC6-213ENST00000462730 SOCS7O14512 581 aa16.02■□□□□ 0.16
HDAC6-213ENST00000462730 DHX15O43143 795 aaKnown RBP16.02■□□□□ 0.16
HDAC6-213ENST00000462730 STX10O60499 249 aa16.02■□□□□ 0.16
HDAC6-213ENST00000462730 CCND2P30279 289 aa16.02■□□□□ 0.16
HDAC6-213ENST00000462730 FXR1P51114 621 aaKnown RBP eCLIP16.02■□□□□ 0.16
HDAC6-213ENST00000462730 ZCWPW2Q504Y3 356 aa16.02■□□□□ 0.16
HDAC6-213ENST00000462730 RINT1Q6NUQ1 792 aa16.02■□□□□ 0.16
HDAC6-213ENST00000462730 LRRC55Q6ZSA7 311 aa16.02■□□□□ 0.16
HDAC6-213ENST00000462730 NCAPG2Q86XI2 1143 aa16.02■□□□□ 0.16
HDAC6-213ENST00000462730 CNGA4Q8IV77 575 aa16.02■□□□□ 0.16
HDAC6-213ENST00000462730 ANKRD35Q8N283 1001 aa16.02■□□□□ 0.16
HDAC6-213ENST00000462730 BANK1Q8NDB2 785 aa16.02■□□□□ 0.16
HDAC6-213ENST00000462730 NEK9Q8TD19 979 aa16.02■□□□□ 0.16
HDAC6-213ENST00000462730 NACC1Q96RE7 527 aa16.02■□□□□ 0.16
HDAC6-213ENST00000462730 LXNQ9BS40 222 aa16.02■□□□□ 0.16
HDAC6-213ENST00000462730 NOC4LQ9BVI4 516 aaKnown RBP16.02■□□□□ 0.16
HDAC6-213ENST00000462730 MAF1Q9H063 256 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms