RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 KIAA0753Q2KHM9 967 aa13.27□□□□□ -0.29
CPNE1-221ENST00000462352 TMEM266Q2M3C6 531 aa13.27□□□□□ -0.29
CPNE1-221ENST00000462352 NBPF20Q3BBV1 942 aa13.27□□□□□ -0.29
CPNE1-221ENST00000462352 FAM160B1Q5W0V3 765 aa13.27□□□□□ -0.29
CPNE1-221ENST00000462352 ARL6IP4Q66PJ3 421 aaKnown RBP13.27□□□□□ -0.29
CPNE1-221ENST00000462352 PLPPR4Q7Z2D5 763 aa13.27□□□□□ -0.29
CPNE1-221ENST00000462352 SLC43A3Q8NBI5 491 aa13.27□□□□□ -0.29
CPNE1-221ENST00000462352 PPP1R13LQ8WUF5 828 aa13.27□□□□□ -0.29
CPNE1-221ENST00000462352 IPO9Q96P70 1041 aaKnown RBP13.27□□□□□ -0.29
CPNE1-221ENST00000462352 ERAP1Q9NZ08 941 aa13.27□□□□□ -0.29
CPNE1-221ENST00000462352 GABBR1Q9UBS5 961 aa13.27□□□□□ -0.29
CPNE1-221ENST00000462352 MAFBQ9Y5Q3 323 aaPredicted RBP13.27□□□□□ -0.29
CPNE1-221ENST00000462352 MARK3P27448 753 aa13.26□□□□□ -0.29
CPNE1-221ENST00000462352 NASPP49321 788 aaPredicted RBP13.26□□□□□ -0.29
CPNE1-221ENST00000462352 SLC26A2P50443 739 aa13.26□□□□□ -0.29
CPNE1-221ENST00000462352 CDK7P50613 346 aa13.26□□□□□ -0.29
CPNE1-221ENST00000462352 UGCGQ16739 394 aa13.26□□□□□ -0.29
CPNE1-221ENST00000462352 LRRC26Q2I0M4 334 aa13.26□□□□□ -0.29
CPNE1-221ENST00000462352 C1orf53Q5VUE5 145 aa13.26□□□□□ -0.29
CPNE1-221ENST00000462352 PDXDC2PQ6P474 469 aa13.26□□□□□ -0.29
CPNE1-221ENST00000462352 NFRKBQ6P4R8 1299 aa13.26□□□□□ -0.29
CPNE1-221ENST00000462352 DTHD1Q6ZMT9 781 aa13.26□□□□□ -0.29
CPNE1-221ENST00000462352 SEZ6LQ9BYH1 1024 aa13.26□□□□□ -0.29
CPNE1-221ENST00000462352 RNPEPQ9H4A4 650 aa13.26□□□□□ -0.29
CPNE1-221ENST00000462352 TFIP11Q9UBB9 837 aaKnown RBP13.26□□□□□ -0.29
CPNE1-221ENST00000462352 CIZ1Q9ULV3 898 aaPredicted RBP13.26□□□□□ -0.29
CPNE1-221ENST00000462352 IGSF9BQ9UPX0 1349 aa13.26□□□□□ -0.29
CPNE1-221ENST00000462352 MYH15Q9Y2K3 1946 aa13.25□□□□□ -0.29
CPNE1-221ENST00000462352 VWA3AA6NCI4 1184 aa13.25□□□□□ -0.29
CPNE1-221ENST00000462352 ATP4AP20648 1035 aa13.25□□□□□ -0.29
CPNE1-221ENST00000462352 RTP1P59025 263 aa13.25□□□□□ -0.29
CPNE1-221ENST00000462352 DNM1Q05193 864 aaKnown RBP13.25□□□□□ -0.29
CPNE1-221ENST00000462352 PDIA5Q14554 519 aa13.25□□□□□ -0.29
CPNE1-221ENST00000462352 SLC39A14Q15043 492 aa13.25□□□□□ -0.29
CPNE1-221ENST00000462352 PLCB4Q15147 1175 aa13.25□□□□□ -0.29
CPNE1-221ENST00000462352 TRIM60Q495X7 471 aa13.25□□□□□ -0.29
CPNE1-221ENST00000462352 FAM47CQ5HY64 1035 aa13.25□□□□□ -0.29
CPNE1-221ENST00000462352 ATL3Q6DD88 541 aa13.25□□□□□ -0.29
CPNE1-221ENST00000462352 C7orf31Q8N865 590 aa13.25□□□□□ -0.29
CPNE1-221ENST00000462352 IGSF22Q8N9C0 903 aa13.25□□□□□ -0.29
CPNE1-221ENST00000462352 BANK1Q8NDB2 785 aa13.25□□□□□ -0.29
CPNE1-221ENST00000462352 ATP6V0A1Q93050 837 aa13.25□□□□□ -0.29
CPNE1-221ENST00000462352 DYDC2Q96IM9 177 aa13.25□□□□□ -0.29
CPNE1-221ENST00000462352 EIF2AK1Q9BQI3 630 aaKnown RBP13.25□□□□□ -0.29
CPNE1-221ENST00000462352 HDAC6Q9UBN7 1215 aa13.25□□□□□ -0.29
CPNE1-221ENST00000462352 LRWD1Q9UFC0 647 aa13.25□□□□□ -0.29
CPNE1-221ENST00000462352 ATP6V1DQ9Y5K8 247 aa13.25□□□□□ -0.29
CPNE1-221ENST00000462352 POTEB3A0JP26 581 aa13.24□□□□□ -0.29
CPNE1-221ENST00000462352 ZNF862O60290 1169 aa13.24□□□□□ -0.29
CPNE1-221ENST00000462352 P4HBP07237 508 aaKnown RBP13.24□□□□□ -0.29
CPNE1-221ENST00000462352 SMIM10L2AP0DMW4 78 aa13.24□□□□□ -0.29
CPNE1-221ENST00000462352 SMIM10L2BP0DMW5 78 aa13.24□□□□□ -0.29
CPNE1-221ENST00000462352 MARCKSP29966 332 aaPredicted RBP13.24□□□□□ -0.29
CPNE1-221ENST00000462352 QARSP47897 775 aaKnown RBP13.24□□□□□ -0.29
CPNE1-221ENST00000462352 RGS19P49795 217 aa13.24□□□□□ -0.29
CPNE1-221ENST00000462352 PSMC5P62195 406 aa13.24□□□□□ -0.29
CPNE1-221ENST00000462352 CYP4A11Q02928 519 aa13.24□□□□□ -0.29
CPNE1-221ENST00000462352 PTPN11Q06124 597 aaPredicted RBP13.24□□□□□ -0.29
CPNE1-221ENST00000462352 STK38Q15208 465 aa13.24□□□□□ -0.29
CPNE1-221ENST00000462352 POTEBQ6S5H4 581 aa13.24□□□□□ -0.29
CPNE1-221ENST00000462352 ANKRD33Q7Z3H0 272 aa13.24□□□□□ -0.29
CPNE1-221ENST00000462352 SESTD1Q86VW0 696 aa13.24□□□□□ -0.29
CPNE1-221ENST00000462352 LINC00301Q8NCQ3 95 aa13.24□□□□□ -0.29
CPNE1-221ENST00000462352 ATP8B4Q8TF62 1192 aa13.24□□□□□ -0.29
CPNE1-221ENST00000462352 CHAMP1Q96JM3 812 aa13.24□□□□□ -0.29
CPNE1-221ENST00000462352 HSD17B14Q9BPX1 270 aa13.24□□□□□ -0.29
CPNE1-221ENST00000462352 LXNQ9BS40 222 aa13.24□□□□□ -0.29
CPNE1-221ENST00000462352 HTATIP2Q9BUP3 242 aa13.24□□□□□ -0.29
CPNE1-221ENST00000462352 RAB34Q9BZG1 259 aa13.24□□□□□ -0.29
CPNE1-221ENST00000462352 RGL1Q9NZL6 768 aa13.24□□□□□ -0.29
CPNE1-221ENST00000462352 GTF2IRD1Q9UHL9 959 aa13.24□□□□□ -0.29
CPNE1-221ENST00000462352 TRPC6Q9Y210 931 aa13.24□□□□□ -0.29
CPNE1-221ENST00000462352 ATP11BQ9Y2G3 1177 aa13.24□□□□□ -0.29
CPNE1-221ENST00000462352 MORC2Q9Y6X9 1032 aaPredicted RBP13.24□□□□□ -0.29
CPNE1-221ENST00000462352 MROH7Q68CQ1 1323 aa13.23□□□□□ -0.29
CPNE1-221ENST00000462352 PQBP1O60828 265 aaKnown RBP13.23□□□□□ -0.29
CPNE1-221ENST00000462352 SLITRK3O94933 977 aa13.23□□□□□ -0.29
CPNE1-221ENST00000462352 YEATS4O95619 227 aa13.23□□□□□ -0.29
CPNE1-221ENST00000462352 OATP04181 439 aa13.23□□□□□ -0.29
CPNE1-221ENST00000462352 PRKCEQ02156 737 aa13.23□□□□□ -0.29
CPNE1-221ENST00000462352 TLE2Q04725 743 aa13.23□□□□□ -0.29
CPNE1-221ENST00000462352 GRIN1Q05586 938 aa13.23□□□□□ -0.29
CPNE1-221ENST00000462352 CTTNQ14247 550 aaKnown RBP13.23□□□□□ -0.29
CPNE1-221ENST00000462352 HIC1Q14526 733 aa13.23□□□□□ -0.29
CPNE1-221ENST00000462352 GDF6Q6KF10 455 aaPredicted RBP13.23□□□□□ -0.29
CPNE1-221ENST00000462352 TRMT1LQ7Z2T5 733 aaKnown RBP13.23□□□□□ -0.29
CPNE1-221ENST00000462352 FAM126BQ8IXS8 530 aa13.23□□□□□ -0.29
CPNE1-221ENST00000462352 CKAP2LQ8IYA6 745 aa13.23□□□□□ -0.29
CPNE1-221ENST00000462352 ERMNQ8TAM6 284 aa13.23□□□□□ -0.29
CPNE1-221ENST00000462352 NEK9Q8TD19 979 aa13.23□□□□□ -0.29
CPNE1-221ENST00000462352 BBXQ8WY36 941 aaPredicted RBP13.23□□□□□ -0.29
CPNE1-221ENST00000462352 TOX2Q96NM4 488 aa13.23□□□□□ -0.29
CPNE1-221ENST00000462352 TRMT13Q9NUP7 481 aaKnown RBP13.23□□□□□ -0.29
CPNE1-221ENST00000462352 SETD4Q9NVD3 440 aa13.23□□□□□ -0.29
CPNE1-221ENST00000462352 CHMP5Q9NZZ3 219 aa13.23□□□□□ -0.29
CPNE1-221ENST00000462352 WRAP73Q9P2S5 460 aaPredicted RBP13.23□□□□□ -0.29
CPNE1-221ENST00000462352 FBXO2Q9UK22 296 aaPredicted RBP13.23□□□□□ -0.29
CPNE1-221ENST00000462352 CFAP45Q9UL16 551 aa13.23□□□□□ -0.29
CPNE1-221ENST00000462352 SRPRBQ9Y5M8 271 aaKnown RBP13.23□□□□□ -0.29
CPNE1-221ENST00000462352 MKI67P46013 3256 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms