RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 XPO4Q9C0E2 1151 aaKnown RBP6.49□□□□□ -1.37
CLK1-207ENST00000461981 CLSTN2Q9H4D0 955 aa6.49□□□□□ -1.37
CLK1-207ENST00000461981 EMILIN3Q9NT22 766 aa6.49□□□□□ -1.37
CLK1-207ENST00000461981 RHBDL2Q9NX52 303 aa6.49□□□□□ -1.37
CLK1-207ENST00000461981 IFNKQ9P0W0 207 aa6.49□□□□□ -1.37
CLK1-207ENST00000461981 RABL2BQ9UNT1 228 aa6.49□□□□□ -1.37
CLK1-207ENST00000461981 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.48□□□□□ -1.37
CLK1-207ENST00000461981 GOLGA6L7A0A1B0GV03 622 aa6.48□□□□□ -1.37
CLK1-207ENST00000461981 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.48□□□□□ -1.37
CLK1-207ENST00000461981 MAP3K13O43283 966 aa6.48□□□□□ -1.37
CLK1-207ENST00000461981 CREB3O43889 395 aa6.48□□□□□ -1.37
CLK1-207ENST00000461981 CYP2C8P10632 490 aa6.48□□□□□ -1.37
CLK1-207ENST00000461981 MAP3K12Q12852 859 aa6.48□□□□□ -1.37
CLK1-207ENST00000461981 FOXD4Q12950 439 aaPredicted RBP6.48□□□□□ -1.37
CLK1-207ENST00000461981 AAK1Q2M2I8 961 aa6.48□□□□□ -1.37
CLK1-207ENST00000461981 PUS10Q3MIT2 529 aaKnown RBP6.48□□□□□ -1.37
CLK1-207ENST00000461981 TJAP1Q5JTD0 557 aa6.48□□□□□ -1.37
CLK1-207ENST00000461981 SLC4A10Q6U841 1118 aa6.48□□□□□ -1.37
CLK1-207ENST00000461981 SRGAP1Q7Z6B7 1085 aa6.48□□□□□ -1.37
CLK1-207ENST00000461981 DEFB123Q8N688 67 aa6.48□□□□□ -1.37
CLK1-207ENST00000461981 PCSK9Q8NBP7 692 aaKnown RBP6.48□□□□□ -1.37
CLK1-207ENST00000461981 SMARCC2Q8TAQ2 1214 aa6.48□□□□□ -1.37
CLK1-207ENST00000461981 MIPOL1Q8TD10 442 aa6.48□□□□□ -1.37
CLK1-207ENST00000461981 IL17RAQ96F46 866 aa6.48□□□□□ -1.37
CLK1-207ENST00000461981 P2RX7Q99572 595 aaKnown RBP6.48□□□□□ -1.37
CLK1-207ENST00000461981 ANO10Q9NW15 660 aa6.48□□□□□ -1.37
CLK1-207ENST00000461981 RAB21Q9UL25 225 aa6.48□□□□□ -1.37
CLK1-207ENST00000461981 TMEM98Q9Y2Y6 226 aa6.48□□□□□ -1.37
CLK1-207ENST00000461981 TMX2Q9Y320 296 aa6.48□□□□□ -1.37
CLK1-207ENST00000461981 L3MBTL1Q9Y468 752 aa6.48□□□□□ -1.37
CLK1-207ENST00000461981 PDE4DIPQ5VU43 2346 aa6.48□□□□□ -1.37
CLK1-207ENST00000461981 DYTNA2CJ06 578 aa6.48□□□□□ -1.37
CLK1-207ENST00000461981 NAT2P11245 290 aa6.48□□□□□ -1.37
CLK1-207ENST00000461981 AKAP17AQ02040 695 aaKnown RBP6.48□□□□□ -1.37
CLK1-207ENST00000461981 PPARDQ03181 441 aa6.48□□□□□ -1.37
CLK1-207ENST00000461981 PPFIA1Q13136 1202 aa6.48□□□□□ -1.37
CLK1-207ENST00000461981 TNNI3KQ59H18 835 aa6.48□□□□□ -1.37
CLK1-207ENST00000461981 C14orf80Q86SX3 495 aa6.48□□□□□ -1.37
CLK1-207ENST00000461981 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.48□□□□□ -1.37
CLK1-207ENST00000461981 GALNT15Q8N3T1 639 aa6.48□□□□□ -1.37
CLK1-207ENST00000461981 CHST13Q8NET6 341 aa6.48□□□□□ -1.37
CLK1-207ENST00000461981 ZNF570Q96NI8 536 aa6.48□□□□□ -1.37
CLK1-207ENST00000461981 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.48□□□□□ -1.375e-15■■■□□ 14.7
CLK1-207ENST00000461981 CRNKL1Q9BZJ0 848 aaKnown RBP6.48□□□□□ -1.37
CLK1-207ENST00000461981 SERPINB13Q9UIV8 391 aa6.48□□□□□ -1.37
CLK1-207ENST00000461981 FPGT-TNNI3KV9GXZ4 949 aa6.48□□□□□ -1.37
CLK1-207ENST00000461981 SOX1O00570 391 aaPredicted RBP6.47□□□□□ -1.37
CLK1-207ENST00000461981 POLE2P56282 527 aa6.47□□□□□ -1.37
CLK1-207ENST00000461981 KRT85P78386 507 aa6.47□□□□□ -1.37
CLK1-207ENST00000461981 RBL2Q08999 1139 aa6.47□□□□□ -1.37
CLK1-207ENST00000461981 DIXDC1Q155Q3 683 aa6.47□□□□□ -1.37
CLK1-207ENST00000461981 MIGA2Q7L4E1 593 aa6.47□□□□□ -1.37
CLK1-207ENST00000461981 RNF180Q86T96 592 aa6.47□□□□□ -1.37
CLK1-207ENST00000461981 ZSCAN29Q8IWY8 852 aaPredicted RBP6.47□□□□□ -1.37
CLK1-207ENST00000461981 SIRT2Q8IXJ6 389 aa6.47□□□□□ -1.37
CLK1-207ENST00000461981 UHMK1Q8TAS1 419 aaKnown RBP6.47□□□□□ -1.37
CLK1-207ENST00000461981 PHOSPHO2Q8TCD6 241 aa6.47□□□□□ -1.37
CLK1-207ENST00000461981 DYDC1Q8WWB3 177 aa6.47□□□□□ -1.37
CLK1-207ENST00000461981 HERVK_113Q902F9 699 aa6.47□□□□□ -1.37
CLK1-207ENST00000461981 OCEL1Q9H607 264 aa6.47□□□□□ -1.37
CLK1-207ENST00000461981 ZNF287Q9HBT7 754 aa6.47□□□□□ -1.37
CLK1-207ENST00000461981 PREBQ9HCU5 417 aa6.47□□□□□ -1.37
CLK1-207ENST00000461981 DDX19AQ9NUU7 478 aaKnown RBP6.47□□□□□ -1.37
CLK1-207ENST00000461981 GALNT8Q9NY28 637 aa6.47□□□□□ -1.37
CLK1-207ENST00000461981 NYAP2Q9P242 653 aa6.47□□□□□ -1.37
CLK1-207ENST00000461981 C15orf41Q9Y2V0 281 aa6.47□□□□□ -1.37
CLK1-207ENST00000461981 BZW2Q9Y6E2 419 aaKnown RBP6.47□□□□□ -1.37
CLK1-207ENST00000461981 U3KPZ7 1027 aaPredicted RBP6.47□□□□□ -1.37
CLK1-207ENST00000461981 SNAP23O00161 211 aa6.47□□□□□ -1.37
CLK1-207ENST00000461981 BIN1O00499 593 aa6.47□□□□□ -1.37
CLK1-207ENST00000461981 CUTAO60888 179 aa6.47□□□□□ -1.37
CLK1-207ENST00000461981 ANP32DO95626 131 aa6.47□□□□□ -1.37
CLK1-207ENST00000461981 ATP1A2P50993 1020 aa6.47□□□□□ -1.37
CLK1-207ENST00000461981 DEUP1Q05D60 604 aa6.47□□□□□ -1.37
CLK1-207ENST00000461981 STIM1Q13586 685 aa6.47□□□□□ -1.37
CLK1-207ENST00000461981 LRRC26Q2I0M4 334 aa6.47□□□□□ -1.37
CLK1-207ENST00000461981 ZNF792Q3KQV3 632 aa6.47□□□□□ -1.37
CLK1-207ENST00000461981 TTC39AQ5SRH9 613 aa6.47□□□□□ -1.37
CLK1-207ENST00000461981 SYNE3Q6ZMZ3 975 aa6.47□□□□□ -1.37
CLK1-207ENST00000461981 DHX40Q8IX18 779 aaKnown RBP6.47□□□□□ -1.37
CLK1-207ENST00000461981 CEP57L1Q8IYX8 460 aa6.47□□□□□ -1.37
CLK1-207ENST00000461981 ZNF384Q8TF68 577 aa6.47□□□□□ -1.37
CLK1-207ENST00000461981 TEKT4Q8WW24 435 aa6.47□□□□□ -1.37
CLK1-207ENST00000461981 TAF4BQ92750 862 aa6.47□□□□□ -1.37
CLK1-207ENST00000461981 GUCD1Q96NT3 240 aa6.47□□□□□ -1.37
CLK1-207ENST00000461981 SIL1Q9H173 461 aa6.47□□□□□ -1.37
CLK1-207ENST00000461981 SEMA6BQ9H3T3 888 aa6.47□□□□□ -1.37
CLK1-207ENST00000461981 LNPEPQ9UIQ6 1025 aa6.47□□□□□ -1.37
CLK1-207ENST00000461981 HPCAL4Q9UM19 191 aa6.47□□□□□ -1.37
CLK1-207ENST00000461981 PPP2R2CQ9Y2T4 447 aa6.47□□□□□ -1.37
CLK1-207ENST00000461981 C2CD2Q9Y426 696 aa6.47□□□□□ -1.37
CLK1-207ENST00000461981 hCG_2014768A0A024R1R8 64 aa6.47□□□□□ -1.37
CLK1-207ENST00000461981 SPDYE16A6NNV3 312 aaPredicted RBP6.47□□□□□ -1.37
CLK1-207ENST00000461981 NKRFO15226 690 aaKnown RBP eCLIP6.47□□□□□ -1.37
CLK1-207ENST00000461981 E2F6O75461 281 aa6.47□□□□□ -1.37
CLK1-207ENST00000461981 AKR1A1P14550 325 aa6.47□□□□□ -1.37
CLK1-207ENST00000461981 DESP17661 470 aa6.47□□□□□ -1.37
CLK1-207ENST00000461981 VCAM1P19320 739 aa6.47□□□□□ -1.37
CLK1-207ENST00000461981 GJB2P29033 226 aa6.47□□□□□ -1.37
CLK1-207ENST00000461981 CDK7P50613 346 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms