RNA–Protein interactions for RNA: ENST00000461056.5

SND1-202, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-202ENST00000461056 PLCB4Q15147 1175 aa9.22□□□□□ -0.93
SND1-202ENST00000461056 CALCRLQ16602 461 aa9.22□□□□□ -0.93
SND1-202ENST00000461056 TRIM71Q2Q1W2 868 aaKnown RBP9.22□□□□□ -0.93
SND1-202ENST00000461056 TRIM60Q495X7 471 aa9.22□□□□□ -0.93
SND1-202ENST00000461056 MARCH8Q5T0T0 291 aa9.22□□□□□ -0.93
SND1-202ENST00000461056 MCTP1Q6DN14 999 aa9.22□□□□□ -0.93
SND1-202ENST00000461056 TRAF7Q6Q0C0 670 aa9.22□□□□□ -0.93
SND1-202ENST00000461056 IGSF22Q8N9C0 903 aa9.22□□□□□ -0.93
SND1-202ENST00000461056 PPP1R13LQ8WUF5 828 aa9.22□□□□□ -0.93
SND1-202ENST00000461056 DHX38Q92620 1227 aaKnown RBP9.22□□□□□ -0.93
SND1-202ENST00000461056 TOX2Q96NM4 488 aa9.22□□□□□ -0.93
SND1-202ENST00000461056 TEKT3Q9BXF9 490 aa9.22□□□□□ -0.93
SND1-202ENST00000461056 SEZ6LQ9BYH1 1024 aa9.22□□□□□ -0.93
SND1-202ENST00000461056 RNPEPQ9H4A4 650 aa9.22□□□□□ -0.93
SND1-202ENST00000461056 STARD7Q9NQZ5 370 aa9.22□□□□□ -0.93
SND1-202ENST00000461056 PDLIM7Q9NR12 457 aa9.22□□□□□ -0.93
SND1-202ENST00000461056 ALPK3Q96L96 1907 aa9.21□□□□□ -0.93
SND1-202ENST00000461056 MBLAC1A4D2B0 266 aaPredicted RBP9.21□□□□□ -0.94
SND1-202ENST00000461056 H3BRB1 525 aa9.21□□□□□ -0.94
SND1-202ENST00000461056 DDX39AO00148 427 aaKnown RBP9.21□□□□□ -0.94
SND1-202ENST00000461056 LYPLA2O95372 231 aa9.21□□□□□ -0.94
SND1-202ENST00000461056 F13A1P00488 732 aa9.21□□□□□ -0.94
SND1-202ENST00000461056 SPATA31C1P0DKV0 1188 aa9.21□□□□□ -0.94
SND1-202ENST00000461056 PDIA4P13667 645 aaKnown RBP9.21□□□□□ -0.94
SND1-202ENST00000461056 SFNP31947 248 aa9.21□□□□□ -0.94
SND1-202ENST00000461056 JAK3P52333 1124 aa9.21□□□□□ -0.94
SND1-202ENST00000461056 ATN1P54259 1190 aaPredicted RBP9.21□□□□□ -0.94
SND1-202ENST00000461056 SP4Q02446 784 aa9.21□□□□□ -0.94
SND1-202ENST00000461056 TLE2Q04725 743 aa9.21□□□□□ -0.94
SND1-202ENST00000461056 PTPN11Q06124 597 aaPredicted RBP9.21□□□□□ -0.94
SND1-202ENST00000461056 RBL2Q08999 1139 aa9.21□□□□□ -0.94
SND1-202ENST00000461056 FAAP100Q0VG06 881 aa9.21□□□□□ -0.94
SND1-202ENST00000461056 BECN1Q14457 450 aa9.21□□□□□ -0.94
SND1-202ENST00000461056 TARBP2Q15633 366 aaKnown RBP9.21□□□□□ -0.94
SND1-202ENST00000461056 KIAA0753Q2KHM9 967 aa9.21□□□□□ -0.94
SND1-202ENST00000461056 BRDTQ58F21 947 aaPredicted RBP9.21□□□□□ -0.94
SND1-202ENST00000461056 GDF6Q6KF10 455 aaPredicted RBP9.21□□□□□ -0.94
SND1-202ENST00000461056 SLFN12Q8IYM2 578 aa9.21□□□□□ -0.94
SND1-202ENST00000461056 LINC01465Q8N7H1 131 aa9.21□□□□□ -0.94
SND1-202ENST00000461056 SPRYD3Q8NCJ5 442 aa9.21□□□□□ -0.94
SND1-202ENST00000461056 WNT8BQ93098 351 aa9.21□□□□□ -0.94
SND1-202ENST00000461056 GLT1D1Q96MS3 346 aa9.21□□□□□ -0.94
SND1-202ENST00000461056 USP28Q96RU2 1077 aa9.21□□□□□ -0.94
SND1-202ENST00000461056 MMTAG2Q9BU76 263 aaKnown RBP9.21□□□□□ -0.94
SND1-202ENST00000461056 ZSCAN16Q9H4T2 348 aaPredicted RBP9.21□□□□□ -0.94
SND1-202ENST00000461056 TUT1Q9H6E5 874 aaKnown RBP9.21□□□□□ -0.94
SND1-202ENST00000461056 DISC1Q9NRI5 854 aa9.21□□□□□ -0.94
SND1-202ENST00000461056 HDAC6Q9UBN7 1215 aa9.21□□□□□ -0.94
SND1-202ENST00000461056 GTF2IRD1Q9UHL9 959 aa9.21□□□□□ -0.94
SND1-202ENST00000461056 NOL7Q9UMY1 257 aaKnown RBP9.21□□□□□ -0.94
SND1-202ENST00000461056 PCDHA10Q9Y5I2 948 aa9.21□□□□□ -0.94
SND1-202ENST00000461056 CHD9Q3L8U1 2897 aa9.21□□□□□ -0.94
SND1-202ENST00000461056 TRIM43BA6NCK2 446 aa9.2□□□□□ -0.94
SND1-202ENST00000461056 LAD1O00515 517 aa9.2□□□□□ -0.94
SND1-202ENST00000461056 NOP56O00567 594 aaKnown RBP9.2□□□□□ -0.94
SND1-202ENST00000461056 KIAA0355O15063 1070 aa9.2□□□□□ -0.94
SND1-202ENST00000461056 B4GALT4O60513 344 aa9.2□□□□□ -0.94
SND1-202ENST00000461056 SLITRK3O94933 977 aa9.2□□□□□ -0.94
SND1-202ENST00000461056 SMIM10L2AP0DMW4 78 aa9.2□□□□□ -0.94
SND1-202ENST00000461056 SMIM10L2BP0DMW5 78 aa9.2□□□□□ -0.94
SND1-202ENST00000461056 ATP2B1P20020 1258 aa9.2□□□□□ -0.94
SND1-202ENST00000461056 ITGB8P26012 769 aa9.2□□□□□ -0.94
SND1-202ENST00000461056 SLC26A2P50443 739 aa9.2□□□□□ -0.94
SND1-202ENST00000461056 GRIN1Q05586 938 aa9.2□□□□□ -0.94
SND1-202ENST00000461056 EPHA7Q15375 998 aa9.2□□□□□ -0.94
SND1-202ENST00000461056 UTP14CQ5TAP6 766 aaKnown RBP9.2□□□□□ -0.94
SND1-202ENST00000461056 ARL6IP4Q66PJ3 421 aaKnown RBP9.2□□□□□ -0.94
SND1-202ENST00000461056 SWSAP1Q6NVH7 229 aa9.2□□□□□ -0.94
SND1-202ENST00000461056 MIS18BP1Q6P0N0 1132 aa9.2□□□□□ -0.94
SND1-202ENST00000461056 SH3RF1Q7Z6J0 888 aa9.2□□□□□ -0.94
SND1-202ENST00000461056 SERINC5Q86VE9 423 aa9.2□□□□□ -0.94
SND1-202ENST00000461056 ATP8B4Q8TF62 1192 aa9.2□□□□□ -0.94
SND1-202ENST00000461056 LRRC15Q8TF66 581 aa9.2□□□□□ -0.94
SND1-202ENST00000461056 LMBR1Q8WVP7 490 aa9.2□□□□□ -0.94
SND1-202ENST00000461056 TRIM43Q96BQ3 446 aaPredicted RBP9.2□□□□□ -0.94
SND1-202ENST00000461056 MS4A3Q96HJ5 214 aa9.2□□□□□ -0.94
SND1-202ENST00000461056 CHAMP1Q96JM3 812 aa9.2□□□□□ -0.94
SND1-202ENST00000461056 TRPV6Q9H1D0 765 aa9.2□□□□□ -0.94
SND1-202ENST00000461056 SMARCAD1Q9H4L7 1026 aa9.2□□□□□ -0.94
SND1-202ENST00000461056 TTC12Q9H892 705 aaPredicted RBP9.2□□□□□ -0.94
SND1-202ENST00000461056 TRMT13Q9NUP7 481 aaKnown RBP9.2□□□□□ -0.94
SND1-202ENST00000461056 PCDH10Q9P2E7 1040 aa9.2□□□□□ -0.94
SND1-202ENST00000461056 RBM19Q9Y4C8 960 aaKnown RBP9.2□□□□□ -0.94
SND1-202ENST00000461056 CLIC4Q9Y696 253 aa9.2□□□□□ -0.94
SND1-202ENST00000461056 POTEMA6NI47 508 aa9.19□□□□□ -0.94
SND1-202ENST00000461056 CHMP2AO43633 222 aa9.19□□□□□ -0.94
SND1-202ENST00000461056 PSAPP07602 524 aa9.19□□□□□ -0.94
SND1-202ENST00000461056 STAT5BP51692 787 aa9.19□□□□□ -0.94
SND1-202ENST00000461056 ZNF200P98182 395 aaPredicted RBP9.19□□□□□ -0.94
SND1-202ENST00000461056 PRKCEQ02156 737 aa9.19□□□□□ -0.94
SND1-202ENST00000461056 GNL2Q13823 731 aaKnown RBP9.19□□□□□ -0.94
SND1-202ENST00000461056 PDIA5Q14554 519 aa9.19□□□□□ -0.94
SND1-202ENST00000461056 GPNMBQ14956 572 aa9.19□□□□□ -0.94
SND1-202ENST00000461056 SLC39A14Q15043 492 aa9.19□□□□□ -0.94
SND1-202ENST00000461056 SF3A1Q15459 793 aaKnown RBP9.19□□□□□ -0.94
SND1-202ENST00000461056 ECM1Q16610 540 aa9.19□□□□□ -0.94
SND1-202ENST00000461056 HYIQ5T013 277 aa9.19□□□□□ -0.94
SND1-202ENST00000461056 ANO5Q75V66 913 aa9.19□□□□□ -0.94
SND1-202ENST00000461056 MIER3Q7Z3K6 550 aa9.19□□□□□ -0.94
SND1-202ENST00000461056 RPAINQ86UA6 219 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms