RNA–Protein interactions for RNA: ENST00000460657.1

CPNE6-202, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 4,540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-202ENST00000460657 POTEGQ6S5H5 508 aa13.12□□□□□ -0.31
CPNE6-202ENST00000460657 POTEEQ6S8J3 1075 aa13.12□□□□□ -0.31
CPNE6-202ENST00000460657 FLAD1Q8NFF5 587 aa13.12□□□□□ -0.31
CPNE6-202ENST00000460657 HSPA6P17066 643 aa13.12□□□□□ -0.31
CPNE6-202ENST00000460657 HOXA13P31271 388 aaPredicted RBP13.12□□□□□ -0.31
CPNE6-202ENST00000460657 FXR2P51116 673 aaKnown RBP eCLIP13.12□□□□□ -0.31
CPNE6-202ENST00000460657 MESDQ14696 234 aa13.12□□□□□ -0.31
CPNE6-202ENST00000460657 XKR9Q5GH70 373 aa13.12□□□□□ -0.31
CPNE6-202ENST00000460657 OTUD6AQ7L8S5 288 aa13.12□□□□□ -0.31
CPNE6-202ENST00000460657 TRAPPC11Q7Z392 1133 aa13.12□□□□□ -0.31
CPNE6-202ENST00000460657 NLRX1Q86UT6 975 aa13.12□□□□□ -0.31
CPNE6-202ENST00000460657 MCF2L2Q86YR7 1114 aa13.12□□□□□ -0.31
CPNE6-202ENST00000460657 CCDC127Q96BQ5 260 aa13.12□□□□□ -0.31
CPNE6-202ENST00000460657 IQCGQ9H095 443 aaKnown RBP13.12□□□□□ -0.31
CPNE6-202ENST00000460657 TYW1Q9NV66 732 aaKnown RBP13.12□□□□□ -0.31
CPNE6-202ENST00000460657 CNTNAP4Q9C0A0 1308 aa13.12□□□□□ -0.31
CPNE6-202ENST00000460657 PDHBP11177 359 aa13.12□□□□□ -0.31
CPNE6-202ENST00000460657 TMEM206Q9H813 350 aa13.12□□□□□ -0.31
CPNE6-202ENST00000460657 SUGCTQ9HAC7 445 aa13.12□□□□□ -0.31
CPNE6-202ENST00000460657 ATP8A1Q9Y2Q0 1164 aa13.12□□□□□ -0.31
CPNE6-202ENST00000460657 FAM205AQ6ZU69 1335 aa13.11□□□□□ -0.31
CPNE6-202ENST00000460657 FOXP2O15409 715 aa13.11□□□□□ -0.31
CPNE6-202ENST00000460657 HARSP12081 509 aaKnown RBP13.11□□□□□ -0.31
CPNE6-202ENST00000460657 ALAS1P13196 640 aa13.11□□□□□ -0.31
CPNE6-202ENST00000460657 CTTNQ14247 550 aaKnown RBP13.11□□□□□ -0.31
CPNE6-202ENST00000460657 WDR93Q6P2C0 686 aa13.11□□□□□ -0.31
CPNE6-202ENST00000460657 KCNG1Q9UIX4 513 aa13.11□□□□□ -0.31
CPNE6-202ENST00000460657 PASKQ96RG2 1323 aa13.11□□□□□ -0.31
CPNE6-202ENST00000460657 MAGEA9P43362 315 aa13.11□□□□□ -0.31
CPNE6-202ENST00000460657 RUNDC3BQ96NL0 473 aa13.11□□□□□ -0.31
CPNE6-202ENST00000460657 CCPG1Q9ULG6 757 aa13.11□□□□□ -0.31
CPNE6-202ENST00000460657 L1RE1Q9UN81 338 aa13.11□□□□□ -0.31
CPNE6-202ENST00000460657 PLAGL2Q9UPG8 496 aa13.11□□□□□ -0.31
CPNE6-202ENST00000460657 NPR1P16066 1061 aa13.11□□□□□ -0.31
CPNE6-202ENST00000460657 PDCLQ13371 301 aa13.11□□□□□ -0.31
CPNE6-202ENST00000460657 INTS8Q75QN2 995 aaKnown RBP13.11□□□□□ -0.31
CPNE6-202ENST00000460657 ACCSQ96QU6 501 aa13.11□□□□□ -0.31
CPNE6-202ENST00000460657 SUGT1Q9Y2Z0 365 aa13.11□□□□□ -0.31
CPNE6-202ENST00000460657 DAGLAQ9Y4D2 1042 aa13.11□□□□□ -0.31
CPNE6-202ENST00000460657 TNS2Q63HR2 1409 aa13.11□□□□□ -0.31
CPNE6-202ENST00000460657 CRKP46108 304 aa13.11□□□□□ -0.31
CPNE6-202ENST00000460657 MFAP3P55082 362 aa13.11□□□□□ -0.31
CPNE6-202ENST00000460657 SNAP25P60880 206 aa13.11□□□□□ -0.31
CPNE6-202ENST00000460657 FIGNQ5HY92 759 aa13.11□□□□□ -0.31
CPNE6-202ENST00000460657 SLC4A9Q96Q91 983 aa13.11□□□□□ -0.31
CPNE6-202ENST00000460657 HPCAL4Q9UM19 191 aa13.11□□□□□ -0.31
CPNE6-202ENST00000460657 TFR2Q9UP52 801 aa13.11□□□□□ -0.31
CPNE6-202ENST00000460657 USTQ9Y2C2 406 aa13.11□□□□□ -0.31
CPNE6-202ENST00000460657 GPR75-ASB3A0A0A6YYF3 556 aa13.1□□□□□ -0.31
CPNE6-202ENST00000460657 ESYT3A0FGR9 886 aa13.1□□□□□ -0.31
CPNE6-202ENST00000460657 SFI1A8K8P3 1242 aa13.1□□□□□ -0.31
CPNE6-202ENST00000460657 ATP2A2P16615 1042 aaKnown RBP13.1□□□□□ -0.31
CPNE6-202ENST00000460657 TNNI1P19237 187 aa13.1□□□□□ -0.31
CPNE6-202ENST00000460657 ALDH3A1P30838 453 aa13.1□□□□□ -0.31
CPNE6-202ENST00000460657 PLTPP55058 493 aa13.1□□□□□ -0.31
CPNE6-202ENST00000460657 IFT88Q13099 833 aa13.1□□□□□ -0.31
CPNE6-202ENST00000460657 SLC18A3Q16572 532 aa13.1□□□□□ -0.31
CPNE6-202ENST00000460657 RCSD1Q6JBY9 416 aa13.1□□□□□ -0.31
CPNE6-202ENST00000460657 CNKSR1Q969H4 720 aa13.1□□□□□ -0.31
CPNE6-202ENST00000460657 TRIM7Q9C029 511 aa13.1□□□□□ -0.31
CPNE6-202ENST00000460657 PLAAQ9Y263 795 aa13.1□□□□□ -0.31
CPNE6-202ENST00000460657 VGLL3A8MV65 326 aa13.1□□□□□ -0.31
CPNE6-202ENST00000460657 STAT3P40763 770 aa13.1□□□□□ -0.31
CPNE6-202ENST00000460657 LACTBP83111 547 aaPredicted RBP13.1□□□□□ -0.31
CPNE6-202ENST00000460657 TTBK2Q6IQ55 1244 aa13.1□□□□□ -0.31
CPNE6-202ENST00000460657 FRMD5Q7Z6J6 570 aa13.1□□□□□ -0.31
CPNE6-202ENST00000460657 PIGOQ8TEQ8 1089 aa13.1□□□□□ -0.31
CPNE6-202ENST00000460657 GRK7Q8WTQ7 553 aa13.1□□□□□ -0.31
CPNE6-202ENST00000460657 FMO2Q99518 471 aa13.1□□□□□ -0.31
CPNE6-202ENST00000460657 C1orf112Q9NSG2 853 aa13.1□□□□□ -0.31
CPNE6-202ENST00000460657 DNAJC12Q9UKB3 198 aa13.1□□□□□ -0.31
CPNE6-202ENST00000460657 TESPA1A2RU30 521 aaPredicted RBP13.1□□□□□ -0.31
CPNE6-202ENST00000460657 CACNB3P54284 484 aa13.1□□□□□ -0.31
CPNE6-202ENST00000460657 AOC3Q16853 763 aa13.1□□□□□ -0.31
CPNE6-202ENST00000460657 UHMK1Q8TAS1 419 aaKnown RBP13.1□□□□□ -0.31
CPNE6-202ENST00000460657 NT5C1BQ96P26 610 aa13.1□□□□□ -0.31
CPNE6-202ENST00000460657 LRRC10BA6NIK2 292 aa13.09□□□□□ -0.31
CPNE6-202ENST00000460657 FGGP02679 453 aa13.09□□□□□ -0.31
CPNE6-202ENST00000460657 EIF3BP55884 814 aaKnown RBP13.09□□□□□ -0.31
CPNE6-202ENST00000460657 E2F4Q16254 413 aa13.09□□□□□ -0.31
CPNE6-202ENST00000460657 SLC17A8Q8NDX2 589 aa13.09□□□□□ -0.31
CPNE6-202ENST00000460657 UBE2TQ9NPD8 197 aaPredicted RBP13.09□□□□□ -0.31
CPNE6-202ENST00000460657 ZNF446Q9NWS9 450 aa13.09□□□□□ -0.31
CPNE6-202ENST00000460657 SETD1AO15047 1707 aaKnown RBP13.09□□□□□ -0.31
CPNE6-202ENST00000460657 MRC1P22897 1456 aa13.09□□□□□ -0.31
CPNE6-202ENST00000460657 DMP1Q13316 513 aaPredicted RBP13.09□□□□□ -0.31
CPNE6-202ENST00000460657 PAPD7Q5XG87 772 aaKnown RBP13.09□□□□□ -0.31
CPNE6-202ENST00000460657 BARGINQ6ZT62 677 aa13.09□□□□□ -0.31
CPNE6-202ENST00000460657 RHOT2Q8IXI1 618 aa13.09□□□□□ -0.31
CPNE6-202ENST00000460657 MMGT1Q8N4V1 131 aa13.09□□□□□ -0.31
CPNE6-202ENST00000460657 TBC1D16Q8TBP0 767 aa13.09□□□□□ -0.31
CPNE6-202ENST00000460657 DIS3Q9Y2L1 958 aaKnown RBP13.09□□□□□ -0.31
CPNE6-202ENST00000460657 LRRC37A3O60309 1634 aa13.09□□□□□ -0.31
CPNE6-202ENST00000460657 CDK17Q00537 523 aa13.09□□□□□ -0.31
CPNE6-202ENST00000460657 DR1Q01658 176 aa13.09□□□□□ -0.31
CPNE6-202ENST00000460657 PCIF1Q9H4Z3 704 aa13.09□□□□□ -0.31
CPNE6-202ENST00000460657 ANKZF1Q9H8Y5 726 aa13.09□□□□□ -0.31
CPNE6-202ENST00000460657 PACSIN2Q9UNF0 486 aaPredicted RBP13.09□□□□□ -0.31
CPNE6-202ENST00000460657 AGTPBP1Q9UPW5 1226 aa13.09□□□□□ -0.31
CPNE6-202ENST00000460657 ABCB11O95342 1321 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms