RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.49□□□□□ -1.37
RNU1-88P-201ENST00000459274 DYMQ7RTS9 669 aa6.49□□□□□ -1.37
RNU1-88P-201ENST00000459274 GPBP1Q86WP2 473 aa6.49□□□□□ -1.37
RNU1-88P-201ENST00000459274 CATSPER3Q86XQ3 398 aa6.49□□□□□ -1.37
RNU1-88P-201ENST00000459274 FAM133AQ8N9E0 248 aa6.49□□□□□ -1.37
RNU1-88P-201ENST00000459274 CRYGNQ8WXF5 182 aa6.49□□□□□ -1.37
RNU1-88P-201ENST00000459274 DDX12PQ92771 950 aa6.49□□□□□ -1.37
RNU1-88P-201ENST00000459274 DYDC2Q96IM9 177 aa6.49□□□□□ -1.37
RNU1-88P-201ENST00000459274 IFT74Q96LB3 600 aa6.49□□□□□ -1.37
RNU1-88P-201ENST00000459274 DRC1Q96MC2 740 aa6.49□□□□□ -1.37
RNU1-88P-201ENST00000459274 INPP4AQ96PE3 977 aaPredicted RBP6.49□□□□□ -1.37
RNU1-88P-201ENST00000459274 UIMC1Q96RL1 719 aa6.49□□□□□ -1.37
RNU1-88P-201ENST00000459274 C7orf25Q9BPX7 421 aa6.49□□□□□ -1.37
RNU1-88P-201ENST00000459274 DNAJC25Q9H1X3 360 aa6.49□□□□□ -1.37
RNU1-88P-201ENST00000459274 BHMT2Q9H2M3 363 aa6.49□□□□□ -1.37
RNU1-88P-201ENST00000459274 ZNF302Q9NR11 478 aa6.49□□□□□ -1.37
RNU1-88P-201ENST00000459274 ANKEF1Q9NU02 776 aa6.49□□□□□ -1.37
RNU1-88P-201ENST00000459274 KBTBD4Q9NVX7 518 aa6.49□□□□□ -1.37
RNU1-88P-201ENST00000459274 SEL1LQ9UBV2 794 aa6.49□□□□□ -1.37
RNU1-88P-201ENST00000459274 ODF2LQ9ULJ1 636 aa6.49□□□□□ -1.37
RNU1-88P-201ENST00000459274 A0A0G2JMZ2 1700 aa6.49□□□□□ -1.37
RNU1-88P-201ENST00000459274 MCM3APO60318 1980 aa6.49□□□□□ -1.37
RNU1-88P-201ENST00000459274 FRMPD4Q14CM0 1322 aa6.49□□□□□ -1.37
RNU1-88P-201ENST00000459274 PP2D1A8MPX8 630 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 E9PMD0 336 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 PES1O00541 588 aaKnown RBP6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 IKBKBO14920 756 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 GGPS1O95749 300 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 PRKCSHP14314 528 aaPredicted RBP6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 SCP2P22307 547 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 RPL13P26373 211 aaKnown RBP6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 TMOD1P28289 359 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 YWHABP31946 246 aaKnown RBP6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 STAT5BP51692 787 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 POLGP54098 1239 aaPredicted RBP6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 MRPS9P82933 396 aaKnown RBP6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 MYL5Q02045 173 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 SP3Q02447 781 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 MAP2K1Q02750 393 aaPredicted RBP6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 CCDC173Q0VFZ6 552 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 DPYDQ12882 1025 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 PAK1Q13153 545 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 GRB10Q13322 594 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 ALCAMQ13740 583 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 PPP2R5AQ15172 486 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 IL17AQ16552 155 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 TSR1Q2NL82 804 aaKnown RBP6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 XKR3Q5GH77 459 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 HYIQ5T013 277 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 NT5DC1Q5TFE4 455 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 KLHL10Q6JEL2 608 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 CYP4F22Q6NT55 531 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 SWSAP1Q6NVH7 229 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 PDXDC2PQ6P474 469 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 METTL7BQ6UX53 244 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 USP49Q70CQ1 688 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 UNC13DQ70J99 1090 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 ARMCX2Q7L311 632 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 CYFIP1Q7L576 1253 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 TRMT1LQ7Z2T5 733 aaKnown RBP6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 C4orf19Q8IY42 314 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 SYCP3Q8IZU3 236 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 MYCT1Q8N699 235 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 SYT2Q8N9I0 419 aaPredicted RBP6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 RETREG2Q8NC44 543 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 ZNF784Q8NCA9 323 aaPredicted RBP6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 BANK1Q8NDB2 785 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 MCPH1Q8NEM0 835 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 CYP2W1Q8TAV3 490 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 NOC3LQ8WTT2 800 aaKnown RBP6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 TCP11Q8WWU5 503 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 SLC7A3Q8WY07 619 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 STAMQ92783 540 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 ERO1AQ96HE7 468 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 DHTKD1Q96HY7 919 aaPredicted RBP6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 ZFP91Q96JP5 570 aaPredicted RBP6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 SPATA33Q96N06 139 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 BPIFA3Q9BQP9 254 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 LXNQ9BS40 222 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 BLZF1Q9H2G9 400 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 UNC45AQ9H3U1 944 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 SMARCAD1Q9H4L7 1026 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 MRPL44Q9H9J2 332 aaKnown RBP6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 TXNRD2Q9NNW7 524 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 COL20A1Q9P218 1284 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 GABBR1Q9UBS5 961 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 TUBE1Q9UJT0 475 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 DBR1Q9UK59 544 aaKnown RBP6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 ZHX1Q9UKY1 873 aaPredicted RBP6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 FAM184BQ9ULE4 1060 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 EXOC7Q9UPT5 735 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 PPME1Q9Y570 386 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 PCDHB13Q9Y5F0 798 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 PHLPP2Q6ZVD8 1323 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 SYNGAP1Q96PV0 1343 aa6.48□□□□□ -1.37
RNU1-88P-201ENST00000459274 DOCK5Q9H7D0 1870 aa6.47□□□□□ -1.37
RNU1-88P-201ENST00000459274 DNAJC25-GNG10A0A024R161 153 aa6.47□□□□□ -1.37
RNU1-88P-201ENST00000459274 POTEB3A0JP26 581 aa6.47□□□□□ -1.37
RNU1-88P-201ENST00000459274 POTEFA5A3E0 1075 aa6.47□□□□□ -1.37
RNU1-88P-201ENST00000459274 RASSF10A6NK89 507 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms