RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 FAM173BQ6P4H8 233 aa15.92■□□□□ 0.14
SMPD4-215ENST00000457039 CTAGE1Q96RT6 745 aa15.92■□□□□ 0.14
SMPD4-215ENST00000457039 ZNF302Q9NR11 478 aa15.92■□□□□ 0.14
SMPD4-215ENST00000457039 PCDHA12Q9UN75 941 aa15.92■□□□□ 0.14
SMPD4-215ENST00000457039 SAMM50Q9Y512 469 aa15.92■□□□□ 0.14
SMPD4-215ENST00000457039 LAD1O00515 517 aa15.91■□□□□ 0.14
SMPD4-215ENST00000457039 BACH1O14867 736 aa15.91■□□□□ 0.14
SMPD4-215ENST00000457039 EVI5O60447 810 aa15.91■□□□□ 0.14
SMPD4-215ENST00000457039 B4GALT4O60513 344 aa15.91■□□□□ 0.14
SMPD4-215ENST00000457039 BRD1O95696 1058 aa15.91■□□□□ 0.14
SMPD4-215ENST00000457039 F13A1P00488 732 aa15.91■□□□□ 0.14
SMPD4-215ENST00000457039 SMIM10L2AP0DMW4 78 aa15.91■□□□□ 0.14
SMPD4-215ENST00000457039 SMIM10L2BP0DMW5 78 aa15.91■□□□□ 0.14
SMPD4-215ENST00000457039 MARK3P27448 753 aa15.91■□□□□ 0.14
SMPD4-215ENST00000457039 DDIT3P35638 169 aa15.91■□□□□ 0.14
SMPD4-215ENST00000457039 PRPHP41219 470 aa15.91■□□□□ 0.14
SMPD4-215ENST00000457039 CHMP4BP1P59074 171 aa15.91■□□□□ 0.14
SMPD4-215ENST00000457039 ATP2C1P98194 919 aaPredicted RBP15.91■□□□□ 0.14
SMPD4-215ENST00000457039 FAAP100Q0VG06 881 aa15.91■□□□□ 0.14
SMPD4-215ENST00000457039 PLCB4Q15147 1175 aa15.91■□□□□ 0.14
SMPD4-215ENST00000457039 EPHA7Q15375 998 aa15.91■□□□□ 0.14
SMPD4-215ENST00000457039 UGCGQ16739 394 aa15.91■□□□□ 0.14
SMPD4-215ENST00000457039 FAM47CQ5HY64 1035 aa15.91■□□□□ 0.14
SMPD4-215ENST00000457039 FAM160B1Q5W0V3 765 aa15.91■□□□□ 0.14
SMPD4-215ENST00000457039 GDF6Q6KF10 455 aaPredicted RBP15.91■□□□□ 0.14
SMPD4-215ENST00000457039 C7orf61Q8IZ16 206 aa15.91■□□□□ 0.14
SMPD4-215ENST00000457039 C7orf31Q8N865 590 aa15.91■□□□□ 0.14
SMPD4-215ENST00000457039 DPF3Q92784 378 aa15.91■□□□□ 0.14
SMPD4-215ENST00000457039 TRPV6Q9H1D0 765 aa15.91■□□□□ 0.14
SMPD4-215ENST00000457039 TRMT13Q9NUP7 481 aaKnown RBP15.91■□□□□ 0.14
SMPD4-215ENST00000457039 GABBR1Q9UBS5 961 aa15.91■□□□□ 0.14
SMPD4-215ENST00000457039 ZDHHC9Q9Y397 364 aa15.91■□□□□ 0.14
SMPD4-215ENST00000457039 ZNF862O60290 1169 aa15.9■□□□□ 0.14
SMPD4-215ENST00000457039 CLTBP09497 229 aa15.9■□□□□ 0.14
SMPD4-215ENST00000457039 FXR2P51116 673 aaKnown RBP eCLIP15.9■□□□□ 0.14
SMPD4-215ENST00000457039 ADAM17P78536 824 aa15.9■□□□□ 0.14
SMPD4-215ENST00000457039 IL17AQ16552 155 aa15.9■□□□□ 0.14
SMPD4-215ENST00000457039 NCAPH2Q6IBW4 605 aa15.9■□□□□ 0.14
SMPD4-215ENST00000457039 PDXDC2PQ6P474 469 aa15.9■□□□□ 0.14
SMPD4-215ENST00000457039 PDLIM7Q9NR12 457 aa15.9■□□□□ 0.14
SMPD4-215ENST00000457039 TBX21Q9UL17 535 aa15.9■□□□□ 0.14
SMPD4-215ENST00000457039 POTEMA6NI47 508 aa15.89■□□□□ 0.13
SMPD4-215ENST00000457039 DCDC2CA8MYV0 355 aa15.89■□□□□ 0.13
SMPD4-215ENST00000457039 TLR3O15455 904 aaKnown RBP15.89■□□□□ 0.13
SMPD4-215ENST00000457039 STBD1O95210 358 aa15.89■□□□□ 0.13
SMPD4-215ENST00000457039 TECP42680 631 aa15.89■□□□□ 0.13
SMPD4-215ENST00000457039 PTPAQ15257 358 aa15.89■□□□□ 0.13
SMPD4-215ENST00000457039 SF3A1Q15459 793 aaKnown RBP15.89■□□□□ 0.13
SMPD4-215ENST00000457039 SH3RF1Q7Z6J0 888 aa15.89■□□□□ 0.13
SMPD4-215ENST00000457039 ATP8B4Q8TF62 1192 aa15.89■□□□□ 0.13
SMPD4-215ENST00000457039 HSD17B14Q9BPX1 270 aa15.89■□□□□ 0.13
SMPD4-215ENST00000457039 FTOQ9C0B1 505 aaKnown RBP eCLIP15.89■□□□□ 0.13
SMPD4-215ENST00000457039 CLIC4Q9Y696 253 aa15.89■□□□□ 0.13
SMPD4-215ENST00000457039 WDR81Q562E7 1941 aa15.89■□□□□ 0.13
SMPD4-215ENST00000457039 NRCAMQ92823 1304 aa15.89■□□□□ 0.13
SMPD4-215ENST00000457039 POTEB3A0JP26 581 aa15.88■□□□□ 0.13
SMPD4-215ENST00000457039 C17orf102A2RUQ5 167 aa15.88■□□□□ 0.13
SMPD4-215ENST00000457039 TRIM43BA6NCK2 446 aa15.88■□□□□ 0.13
SMPD4-215ENST00000457039 KIAA0355O15063 1070 aa15.88■□□□□ 0.13
SMPD4-215ENST00000457039 HBP1O60381 514 aa15.88■□□□□ 0.13
SMPD4-215ENST00000457039 BMP15O95972 392 aa15.88■□□□□ 0.13
SMPD4-215ENST00000457039 P4HBP07237 508 aaKnown RBP15.88■□□□□ 0.13
SMPD4-215ENST00000457039 INSRRP14616 1297 aa15.88■□□□□ 0.13
SMPD4-215ENST00000457039 ANP32AP39687 249 aaKnown RBP15.88■□□□□ 0.13
SMPD4-215ENST00000457039 PSMC5P62195 406 aa15.88■□□□□ 0.13
SMPD4-215ENST00000457039 ZNF200P98182 395 aaPredicted RBP15.88■□□□□ 0.13
SMPD4-215ENST00000457039 PPFIA1Q13136 1202 aa15.88■□□□□ 0.13
SMPD4-215ENST00000457039 FOXD4L5Q5VV16 416 aaPredicted RBP15.88■□□□□ 0.13
SMPD4-215ENST00000457039 ARL6IP4Q66PJ3 421 aaKnown RBP15.88■□□□□ 0.13
SMPD4-215ENST00000457039 POTEBQ6S5H4 581 aa15.88■□□□□ 0.13
SMPD4-215ENST00000457039 IGSF22Q8N9C0 903 aa15.88■□□□□ 0.13
SMPD4-215ENST00000457039 BANK1Q8NDB2 785 aa15.88■□□□□ 0.13
SMPD4-215ENST00000457039 LMBR1Q8WVP7 490 aa15.88■□□□□ 0.13
SMPD4-215ENST00000457039 FOXD4L4Q8WXT5 416 aaPredicted RBP15.88■□□□□ 0.13
SMPD4-215ENST00000457039 BBXQ8WY36 941 aaPredicted RBP15.88■□□□□ 0.13
SMPD4-215ENST00000457039 TRIM43Q96BQ3 446 aaPredicted RBP15.88■□□□□ 0.13
SMPD4-215ENST00000457039 USP28Q96RU2 1077 aa15.88■□□□□ 0.13
SMPD4-215ENST00000457039 TSHZ2Q9NRE2 1034 aa15.88■□□□□ 0.13
SMPD4-215ENST00000457039 SETD4Q9NVD3 440 aa15.88■□□□□ 0.13
SMPD4-215ENST00000457039 WRAP73Q9P2S5 460 aaPredicted RBP15.88■□□□□ 0.13
SMPD4-215ENST00000457039 MORC2Q9Y6X9 1032 aaPredicted RBP15.88■□□□□ 0.13
SMPD4-215ENST00000457039 MYH15Q9Y2K3 1946 aa15.88■□□□□ 0.13
SMPD4-215ENST00000457039 MBLAC1A4D2B0 266 aaPredicted RBP15.87■□□□□ 0.13
SMPD4-215ENST00000457039 ZBTB42B2RXF5 422 aa15.87■□□□□ 0.13
SMPD4-215ENST00000457039 SLITRK3O94933 977 aa15.87■□□□□ 0.13
SMPD4-215ENST00000457039 OATP04181 439 aa15.87■□□□□ 0.13
SMPD4-215ENST00000457039 QARSP47897 775 aaKnown RBP15.87■□□□□ 0.13
SMPD4-215ENST00000457039 PRKCEQ02156 737 aa15.87■□□□□ 0.13
SMPD4-215ENST00000457039 PDIA5Q14554 519 aa15.87■□□□□ 0.13
SMPD4-215ENST00000457039 GRIK4Q16099 956 aa15.87■□□□□ 0.13
SMPD4-215ENST00000457039 PTGISQ16647 500 aa15.87■□□□□ 0.13
SMPD4-215ENST00000457039 MARCH8Q5T0T0 291 aa15.87■□□□□ 0.13
SMPD4-215ENST00000457039 DTHD1Q6ZMT9 781 aa15.87■□□□□ 0.13
SMPD4-215ENST00000457039 NEK9Q8TD19 979 aa15.87■□□□□ 0.13
SMPD4-215ENST00000457039 DHX38Q92620 1227 aaKnown RBP15.87■□□□□ 0.13
SMPD4-215ENST00000457039 ATP6V0A1Q93050 837 aa15.87■□□□□ 0.13
SMPD4-215ENST00000457039 DYDC2Q96IM9 177 aa15.87■□□□□ 0.13
SMPD4-215ENST00000457039 FAM167AQ96KS9 214 aa15.87■□□□□ 0.13
SMPD4-215ENST00000457039 EIF2AK1Q9BQI3 630 aaKnown RBP15.87■□□□□ 0.13
SMPD4-215ENST00000457039 RGL1Q9NZL6 768 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms