RNA–Protein interactions for RNA: ENST00000455906.1

COL20A1-204, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 5

Gene COL20A1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-204ENST00000455906 RSPH3Q86UC2 560 aa21.44■■□□□ 1.02
COL20A1-204ENST00000455906 SKAP1Q86WV1 359 aa21.44■■□□□ 1.02
COL20A1-204ENST00000455906 IL17RAQ96F46 866 aa21.44■■□□□ 1.02
COL20A1-204ENST00000455906 MXRA8Q9BRK3 442 aa21.44■■□□□ 1.02
COL20A1-204ENST00000455906 BRPF3Q9ULD4 1205 aa21.44■■□□□ 1.02
COL20A1-204ENST00000455906 CDY2AQ9Y6F7 541 aa21.44■■□□□ 1.02
COL20A1-204ENST00000455906 LOXHD1Q8IVV2 1947 aa21.44■■□□□ 1.02
COL20A1-204ENST00000455906 ENPP3O14638 875 aa21.43■■□□□ 1.02
COL20A1-204ENST00000455906 INSRRP14616 1297 aa21.43■■□□□ 1.02
COL20A1-204ENST00000455906 IGBP1P78318 339 aa21.43■■□□□ 1.02
COL20A1-204ENST00000455906 BMP2KLQ5H9B9 411 aa21.43■■□□□ 1.02
COL20A1-204ENST00000455906 BANK1Q8NDB2 785 aa21.43■■□□□ 1.02
COL20A1-204ENST00000455906 NEK9Q8TD19 979 aa21.43■■□□□ 1.02
COL20A1-204ENST00000455906 PGBD1Q96JS3 809 aa21.43■■□□□ 1.02
COL20A1-204ENST00000455906 TCEANC2Q96MN5 208 aa21.43■■□□□ 1.02
COL20A1-204ENST00000455906 NEK1Q96PY6 1258 aa21.43■■□□□ 1.02
COL20A1-204ENST00000455906 RIC8AQ9NPQ8 531 aa21.43■■□□□ 1.02
COL20A1-204ENST00000455906 RBM28Q9NW13 759 aaKnown RBP21.43■■□□□ 1.02
COL20A1-204ENST00000455906 SLC9A2Q9UBY0 812 aa21.43■■□□□ 1.02
COL20A1-204ENST00000455906 C5orf42Q9H799 3197 aa21.42■■□□□ 1.02
COL20A1-204ENST00000455906 RRN3P2A6NIE6 340 aa21.42■■□□□ 1.02
COL20A1-204ENST00000455906 C5orf67F2Z3F1 127 aa21.42■■□□□ 1.02
COL20A1-204ENST00000455906 NFASCO94856 1347 aa21.42■■□□□ 1.02
COL20A1-204ENST00000455906 NAPAP54920 295 aa21.42■■□□□ 1.02
COL20A1-204ENST00000455906 MRPS6P82932 125 aaKnown RBP21.42■■□□□ 1.02
COL20A1-204ENST00000455906 COL19A1Q14993 1142 aa21.42■■□□□ 1.02
COL20A1-204ENST00000455906 TCEAL5Q5H9L2 206 aa21.42■■□□□ 1.02
COL20A1-204ENST00000455906 PPP1R18Q6NYC8 613 aa21.42■■□□□ 1.02
COL20A1-204ENST00000455906 SYNE3Q6ZMZ3 975 aa21.42■■□□□ 1.02
COL20A1-204ENST00000455906 TSHZ1Q6ZSZ6 1077 aa21.42■■□□□ 1.02
COL20A1-204ENST00000455906 ADGRA3Q8IWK6 1321 aa21.42■■□□□ 1.02
COL20A1-204ENST00000455906 FIBCD1Q8N539 461 aa21.42■■□□□ 1.02
COL20A1-204ENST00000455906 LINC01599Q8WXQ3 324 aa21.42■■□□□ 1.02
COL20A1-204ENST00000455906 AGO3Q9H9G7 860 aaKnown RBP21.42■■□□□ 1.02
COL20A1-204ENST00000455906 STXBP3O00186 592 aa21.41■■□□□ 1.02
COL20A1-204ENST00000455906 ARP10275 920 aa21.41■■□□□ 1.02
COL20A1-204ENST00000455906 IL9P15248 144 aa21.41■■□□□ 1.02
COL20A1-204ENST00000455906 ACTR2P61160 394 aa21.41■■□□□ 1.02
COL20A1-204ENST00000455906 ITGB3BPQ13352 177 aaPredicted RBP21.41■■□□□ 1.02
COL20A1-204ENST00000455906 PLCB4Q15147 1175 aa21.41■■□□□ 1.02
COL20A1-204ENST00000455906 RTN1Q16799 776 aa21.41■■□□□ 1.02
COL20A1-204ENST00000455906 ADCK5Q3MIX3 580 aa21.41■■□□□ 1.02
COL20A1-204ENST00000455906 RNF20Q5VTR2 975 aa21.41■■□□□ 1.02
COL20A1-204ENST00000455906 TEX2Q8IWB9 1127 aa21.41■■□□□ 1.02
COL20A1-204ENST00000455906 FAM178BQ8IXR5 827 aa21.41■■□□□ 1.02
COL20A1-204ENST00000455906 RASEFQ8IZ41 740 aa21.41■■□□□ 1.02
COL20A1-204ENST00000455906 ZNF689Q96CS4 500 aaPredicted RBP21.41■■□□□ 1.02
COL20A1-204ENST00000455906 LRFN3Q9BTN0 628 aa21.41■■□□□ 1.02
COL20A1-204ENST00000455906 ANO3Q9BYT9 981 aa21.41■■□□□ 1.02
COL20A1-204ENST00000455906 C11orf16Q9NQ32 467 aa21.41■■□□□ 1.02
COL20A1-204ENST00000455906 GRXCR2A6NFK2 248 aa21.4■■□□□ 1.02
COL20A1-204ENST00000455906 ZBTB43O43298 467 aa21.4■■□□□ 1.02
COL20A1-204ENST00000455906 CD52P31358 61 aa21.4■■□□□ 1.02
COL20A1-204ENST00000455906 CTNNB1P35222 781 aa21.4■■□□□ 1.02
COL20A1-204ENST00000455906 BMPR1AP36894 532 aa21.4■■□□□ 1.02
COL20A1-204ENST00000455906 TSGA10IPQ3SY00 556 aa21.4■■□□□ 1.02
COL20A1-204ENST00000455906 CEP55Q53EZ4 464 aa21.4■■□□□ 1.02
COL20A1-204ENST00000455906 PTCRAQ6ISU1 281 aaPredicted RBP21.4■■□□□ 1.02
COL20A1-204ENST00000455906 DHX32Q7L7V1 743 aaKnown RBP21.4■■□□□ 1.02
COL20A1-204ENST00000455906 PLPPR4Q7Z2D5 763 aa21.4■■□□□ 1.02
COL20A1-204ENST00000455906 TRAPPC12Q8WVT3 735 aa21.4■■□□□ 1.02
COL20A1-204ENST00000455906 CLP1Q92989 425 aaKnown RBP21.4■■□□□ 1.02
COL20A1-204ENST00000455906 PABPC5Q96DU9 382 aaKnown RBP21.4■■□□□ 1.02
COL20A1-204ENST00000455906 FAM49AQ9H0Q0 323 aaPredicted RBP21.4■■□□□ 1.02
COL20A1-204ENST00000455906 NSUN3Q9H649 340 aaKnown RBP21.4■■□□□ 1.02
COL20A1-204ENST00000455906 AZI2Q9H6S1 392 aa21.4■■□□□ 1.02
COL20A1-204ENST00000455906 AGO4Q9HCK5 861 aaKnown RBP21.4■■□□□ 1.02
COL20A1-204ENST00000455906 FAM217BQ9NTX9 383 aaPredicted RBP21.4■■□□□ 1.02
COL20A1-204ENST00000455906 TRPC6Q9Y210 931 aa21.4■■□□□ 1.02
COL20A1-204ENST00000455906 V9GY48 417 aaPredicted RBP21.4■■□□□ 1.02
COL20A1-204ENST00000455906 H3BQ06 376 aaPredicted RBP21.39■■□□□ 1.01
COL20A1-204ENST00000455906 MEIS1O00470 390 aa21.39■■□□□ 1.01
COL20A1-204ENST00000455906 ATG7O95352 703 aa21.39■■□□□ 1.01
COL20A1-204ENST00000455906 FOSP01100 380 aaPredicted RBP21.39■■□□□ 1.01
COL20A1-204ENST00000455906 RPLP2P05387 115 aaKnown RBP21.39■■□□□ 1.01
COL20A1-204ENST00000455906 RB1P06400 928 aa21.39■■□□□ 1.01
COL20A1-204ENST00000455906 CLK2P49760 499 aaKnown RBP21.39■■□□□ 1.01
COL20A1-204ENST00000455906 ADCY7P51828 1080 aa21.39■■□□□ 1.01
COL20A1-204ENST00000455906 RTN4RL1Q86UN2 441 aaPredicted RBP21.39■■□□□ 1.01
COL20A1-204ENST00000455906 CRIPAKQ8N1N5 446 aa21.39■■□□□ 1.01
COL20A1-204ENST00000455906 SDF4Q9BRK5 362 aa21.39■■□□□ 1.01
COL20A1-204ENST00000455906 TMEM260Q9NX78 707 aa21.39■■□□□ 1.01
COL20A1-204ENST00000455906 BARHL2Q9NY43 387 aa21.39■■□□□ 1.01
COL20A1-204ENST00000455906 PCDHA2Q9Y5H9 948 aa21.39■■□□□ 1.01
COL20A1-204ENST00000455906 SQORQ9Y6N5 450 aa21.39■■□□□ 1.01
COL20A1-204ENST00000455906 KIAA1671Q9BY89 1806 aa21.39■■□□□ 1.01
COL20A1-204ENST00000455906 SMCO2A6NFE2 343 aa21.38■■□□□ 1.01
COL20A1-204ENST00000455906 PI4K2BG5E9Z4 385 aa21.38■■□□□ 1.01
COL20A1-204ENST00000455906 hCG_1984214I3L0E3 225 aa21.38■■□□□ 1.01
COL20A1-204ENST00000455906 GRM6O15303 877 aa21.38■■□□□ 1.01
COL20A1-204ENST00000455906 DGKIO75912 1065 aa21.38■■□□□ 1.01
COL20A1-204ENST00000455906 CDC27P30260 824 aa21.38■■□□□ 1.01
COL20A1-204ENST00000455906 SREBF1P36956 1147 aa21.38■■□□□ 1.01
COL20A1-204ENST00000455906 STAT5BP51692 787 aa21.38■■□□□ 1.01
COL20A1-204ENST00000455906 TMEM62Q0P6H9 643 aa21.38■■□□□ 1.01
COL20A1-204ENST00000455906 TMEM31Q5JXX7 168 aa21.38■■□□□ 1.01
COL20A1-204ENST00000455906 IER5Q5VY09 327 aa21.38■■□□□ 1.01
COL20A1-204ENST00000455906 GJD3Q8N144 294 aa21.38■■□□□ 1.01
COL20A1-204ENST00000455906 ZNF713Q8N859 430 aaPredicted RBP21.38■■□□□ 1.01
COL20A1-204ENST00000455906 RWDD3Q9Y3V2 267 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms