RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 ANAPC16Q96DE5 110 aa3.82□□□□□ -1.8
LINC02540-201ENST00000455554 SEC16BQ96JE7 1060 aa3.82□□□□□ -1.8
LINC02540-201ENST00000455554 C12orf65Q9H3J6 166 aaKnown RBP3.82□□□□□ -1.8
LINC02540-201ENST00000455554 GPR27Q9NS67 375 aa3.82□□□□□ -1.8
LINC02540-201ENST00000455554 AURKAIP1Q9NWT8 199 aaPredicted RBP3.82□□□□□ -1.8
LINC02540-201ENST00000455554 PPARGC1AQ9UBK2 798 aaKnown RBP3.82□□□□□ -1.8
LINC02540-201ENST00000455554 MATN2O00339 956 aa3.81□□□□□ -1.8
LINC02540-201ENST00000455554 SCAMP3O14828 347 aaKnown RBP3.81□□□□□ -1.8
LINC02540-201ENST00000455554 SUSD5O60279 629 aa3.81□□□□□ -1.8
LINC02540-201ENST00000455554 HIBADHP31937 336 aaKnown RBP3.81□□□□□ -1.8
LINC02540-201ENST00000455554 ETV4P43268 484 aa3.81□□□□□ -1.8
LINC02540-201ENST00000455554 NFYCQ13952 458 aa3.81□□□□□ -1.8
LINC02540-201ENST00000455554 DPP8Q6V1X1 898 aaPredicted RBP3.81□□□□□ -1.8
LINC02540-201ENST00000455554 Q6ZPA2 131 aa3.81□□□□□ -1.8
LINC02540-201ENST00000455554 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.81□□□□□ -1.8
LINC02540-201ENST00000455554 HOMEZQ8IX15 550 aa3.81□□□□□ -1.8
LINC02540-201ENST00000455554 FAM178BQ8IXR5 827 aa3.81□□□□□ -1.8
LINC02540-201ENST00000455554 VOPP1Q96AW1 172 aa3.81□□□□□ -1.8
LINC02540-201ENST00000455554 SCYL1Q96KG9 808 aa3.81□□□□□ -1.8
LINC02540-201ENST00000455554 PRRX2Q99811 253 aa3.81□□□□□ -1.8
LINC02540-201ENST00000455554 ZNF703Q9H7S9 590 aaPredicted RBP3.81□□□□□ -1.8
LINC02540-201ENST00000455554 MSL2Q9HCI7 577 aa3.81□□□□□ -1.8
LINC02540-201ENST00000455554 TLR9Q9NR96 1032 aa3.81□□□□□ -1.8
LINC02540-201ENST00000455554 TELO2Q9Y4R8 837 aa3.81□□□□□ -1.8
LINC02540-201ENST00000455554 ARHGAP6O43182 974 aa3.8□□□□□ -1.8
LINC02540-201ENST00000455554 MSCO60682 206 aa3.8□□□□□ -1.8
LINC02540-201ENST00000455554 RAMP2O60895 175 aa3.8□□□□□ -1.8
LINC02540-201ENST00000455554 GNAT1P11488 350 aa3.8□□□□□ -1.8
LINC02540-201ENST00000455554 COL6A2P12110 1019 aa3.8□□□□□ -1.8
LINC02540-201ENST00000455554 MSX2P35548 267 aaPredicted RBP3.8□□□□□ -1.8
LINC02540-201ENST00000455554 IL12RB1P42701 662 aa3.8□□□□□ -1.8
LINC02540-201ENST00000455554 SPIRE1Q08AE8 756 aa3.8□□□□□ -1.8
LINC02540-201ENST00000455554 MAP4K2Q12851 820 aa3.8□□□□□ -1.8
LINC02540-201ENST00000455554 FOXL1Q12952 345 aa3.8□□□□□ -1.8
LINC02540-201ENST00000455554 METTL16Q86W50 562 aaKnown RBP3.8□□□□□ -1.8
LINC02540-201ENST00000455554 MICAL1Q8TDZ2 1067 aa3.8□□□□□ -1.8
LINC02540-201ENST00000455554 KCTD13Q8WZ19 329 aa3.8□□□□□ -1.8
LINC02540-201ENST00000455554 CLIP3Q96DZ5 547 aa3.8□□□□□ -1.8
LINC02540-201ENST00000455554 PHF20Q9BVI0 1012 aa3.8□□□□□ -1.8
LINC02540-201ENST00000455554 PUF60Q9UHX1 559 aaKnown RBP3.8□□□□□ -1.8
LINC02540-201ENST00000455554 DSEQ9UL01 958 aa3.8□□□□□ -1.8
LINC02540-201ENST00000455554 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.8□□□□□ -1.8
LINC02540-201ENST00000455554 REXO2Q9Y3B8 237 aaKnown RBP3.8□□□□□ -1.8
LINC02540-201ENST00000455554 B2RBV5 119 aa3.79□□□□□ -1.8
LINC02540-201ENST00000455554 ACOT7O00154 380 aa3.79□□□□□ -1.8
LINC02540-201ENST00000455554 NKRFO15226 690 aaKnown RBP eCLIP3.79□□□□□ -1.8
LINC02540-201ENST00000455554 CAPNS1P04632 268 aa3.79□□□□□ -1.8
LINC02540-201ENST00000455554 KRT4P19013 534 aa3.79□□□□□ -1.8
LINC02540-201ENST00000455554 GRK2P25098 689 aa3.79□□□□□ -1.8
LINC02540-201ENST00000455554 LMO1P25800 156 aa3.79□□□□□ -1.8
LINC02540-201ENST00000455554 GRK3P35626 688 aa3.79□□□□□ -1.8
LINC02540-201ENST00000455554 EPHA5P54756 1037 aa3.79□□□□□ -1.8
LINC02540-201ENST00000455554 HHEXQ03014 270 aa3.79□□□□□ -1.8
LINC02540-201ENST00000455554 COL10A1Q03692 680 aa3.79□□□□□ -1.8
LINC02540-201ENST00000455554 TBR1Q16650 682 aa3.79□□□□□ -1.8
LINC02540-201ENST00000455554 HABP4Q5JVS0 413 aaKnown RBP3.79□□□□□ -1.8
LINC02540-201ENST00000455554 LARP1BQ659C4 914 aaKnown RBP3.79□□□□□ -1.8
LINC02540-201ENST00000455554 RSPO2Q6UXX9 243 aaPredicted RBP3.79□□□□□ -1.8
LINC02540-201ENST00000455554 KCTD1Q719H9 257 aa3.79□□□□□ -1.8
LINC02540-201ENST00000455554 CFHR4Q92496 578 aa3.79□□□□□ -1.8
LINC02540-201ENST00000455554 KCNJ15Q99712 375 aa3.79□□□□□ -1.8
LINC02540-201ENST00000455554 SLC39A2Q9NP94 309 aa3.79□□□□□ -1.8
LINC02540-201ENST00000455554 PLA2G3Q9NZ20 509 aa3.79□□□□□ -1.8
LINC02540-201ENST00000455554 ACTR10Q9NZ32 417 aa3.79□□□□□ -1.8
LINC02540-201ENST00000455554 CEP72Q9P209 647 aa3.79□□□□□ -1.8
LINC02540-201ENST00000455554 RECKO95980 971 aa3.78□□□□□ -1.8
LINC02540-201ENST00000455554 HMGCRP04035 888 aa3.78□□□□□ -1.8
LINC02540-201ENST00000455554 GJA4P35212 333 aa3.78□□□□□ -1.8
LINC02540-201ENST00000455554 GRIA2P42262 883 aa3.78□□□□□ -1.8
LINC02540-201ENST00000455554 DBPQ10586 325 aaPredicted RBP3.78□□□□□ -1.8
LINC02540-201ENST00000455554 KIZQ2M2Z5 673 aa3.78□□□□□ -1.8
LINC02540-201ENST00000455554 WDR72Q3MJ13 1102 aa3.78□□□□□ -1.8
LINC02540-201ENST00000455554 USP53Q70EK8 1073 aa3.78□□□□□ -1.8
LINC02540-201ENST00000455554 SGMS1Q86VZ5 419 aa3.78□□□□□ -1.8
LINC02540-201ENST00000455554 SCUBE1Q8IWY4 988 aa3.78□□□□□ -1.8
LINC02540-201ENST00000455554 ULK2Q8IYT8 1036 aa3.78□□□□□ -1.8
LINC02540-201ENST00000455554 ZDHHC5Q9C0B5 715 aa3.78□□□□□ -1.8
LINC02540-201ENST00000455554 PARPBPQ9NWS1 579 aa3.78□□□□□ -1.8
LINC02540-201ENST00000455554 GIT1Q9Y2X7 761 aa3.78□□□□□ -1.8
LINC02540-201ENST00000455554 SMAD7O15105 426 aaKnown RBP3.77□□□□□ -1.81
LINC02540-201ENST00000455554 DDAH1O94760 285 aa3.77□□□□□ -1.81
LINC02540-201ENST00000455554 PPP2R2AP63151 447 aa3.77□□□□□ -1.81
LINC02540-201ENST00000455554 MRM1Q6IN84 353 aaKnown RBP3.77□□□□□ -1.81
LINC02540-201ENST00000455554 LBX2Q6XYB7 198 aa3.77□□□□□ -1.81
LINC02540-201ENST00000455554 ADGRE4PQ86SQ3 457 aa3.77□□□□□ -1.81
LINC02540-201ENST00000455554 NT5DC4Q86YG4 428 aa3.77□□□□□ -1.81
LINC02540-201ENST00000455554 TMPRSS6Q8IU80 811 aa3.77□□□□□ -1.81
LINC02540-201ENST00000455554 IER2Q9BTL4 223 aa3.77□□□□□ -1.81
LINC02540-201ENST00000455554 TTPALQ9BTX7 342 aa3.77□□□□□ -1.81
LINC02540-201ENST00000455554 KIAA1683Q9H0B3 1180 aa3.77□□□□□ -1.81
LINC02540-201ENST00000455554 NELFAQ9H3P2 528 aa3.77□□□□□ -1.81
LINC02540-201ENST00000455554 SLC2A4RGQ9NR83 387 aa3.77□□□□□ -1.81
LINC02540-201ENST00000455554 FBXO10Q9UK96 956 aa3.77□□□□□ -1.81
LINC02540-201ENST00000455554 KRTAP23-1A1A580 65 aa3.76□□□□□ -1.81
LINC02540-201ENST00000455554 CAPN14A8MX76 684 aa3.76□□□□□ -1.81
LINC02540-201ENST00000455554 AGRPO00253 132 aa3.76□□□□□ -1.81
LINC02540-201ENST00000455554 FOXN1O15353 648 aa3.76□□□□□ -1.81
LINC02540-201ENST00000455554 CYP27B1O15528 508 aa3.76□□□□□ -1.81
LINC02540-201ENST00000455554 DLX3O60479 287 aa3.76□□□□□ -1.81
LINC02540-201ENST00000455554 PEX11BO96011 259 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms