RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 C17orf102A2RUQ5 167 aa9.93□□□□□ -0.82
RFX3-209ENST00000451859 STXBP3O00186 592 aa9.93□□□□□ -0.82
RFX3-209ENST00000451859 ATP9AO75110 1047 aa9.93□□□□□ -0.82
RFX3-209ENST00000451859 REC8O95072 547 aa9.93□□□□□ -0.82
RFX3-209ENST00000451859 CTSHP09668 335 aa9.93□□□□□ -0.82
RFX3-209ENST00000451859 ITGB5P18084 799 aa9.93□□□□□ -0.82
RFX3-209ENST00000451859 RPS6KB1P23443 525 aa9.93□□□□□ -0.82
RFX3-209ENST00000451859 MARK3P27448 753 aa9.93□□□□□ -0.82
RFX3-209ENST00000451859 ADD1P35611 737 aaKnown RBP9.93□□□□□ -0.82
RFX3-209ENST00000451859 TCF7P36402 384 aaPredicted RBP9.93□□□□□ -0.82
RFX3-209ENST00000451859 KCNJ6P48051 423 aa9.93□□□□□ -0.82
RFX3-209ENST00000451859 ADCY7P51828 1080 aa9.93□□□□□ -0.82
RFX3-209ENST00000451859 PTK7Q13308 1070 aa9.93□□□□□ -0.82
RFX3-209ENST00000451859 MTMR1Q13613 665 aa9.93□□□□□ -0.82
RFX3-209ENST00000451859 ZNF618Q5T7W0 954 aa9.93□□□□□ -0.82
RFX3-209ENST00000451859 TRAF7Q6Q0C0 670 aa9.93□□□□□ -0.82
RFX3-209ENST00000451859 TMCO2Q7Z6W1 182 aaPredicted RBP9.93□□□□□ -0.82
RFX3-209ENST00000451859 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.93□□□□□ -0.82
RFX3-209ENST00000451859 DDX27Q96GQ7 796 aaKnown RBP9.93□□□□□ -0.82
RFX3-209ENST00000451859 UIMC1Q96RL1 719 aa9.93□□□□□ -0.82
RFX3-209ENST00000451859 GAS2L1Q99501 681 aaPredicted RBP9.93□□□□□ -0.82
RFX3-209ENST00000451859 EHMT1Q9H9B1 1298 aa9.93□□□□□ -0.82
RFX3-209ENST00000451859 CERS4Q9HA82 394 aa9.93□□□□□ -0.82
RFX3-209ENST00000451859 SLC28A3Q9HAS3 691 aa9.93□□□□□ -0.82
RFX3-209ENST00000451859 FAM217BQ9NTX9 383 aaPredicted RBP9.93□□□□□ -0.82
RFX3-209ENST00000451859 ZNF215Q9UL58 517 aaPredicted RBP9.93□□□□□ -0.82
RFX3-209ENST00000451859 CUL9Q8IWT3 2517 aa9.92□□□□□ -0.82
RFX3-209ENST00000451859 SMCO2A6NFE2 343 aa9.92□□□□□ -0.82
RFX3-209ENST00000451859 DLL1O00548 723 aa9.92□□□□□ -0.82
RFX3-209ENST00000451859 TREHO43280 583 aa9.92□□□□□ -0.82
RFX3-209ENST00000451859 NBNO60934 754 aa9.92□□□□□ -0.82
RFX3-209ENST00000451859 CA3P07451 260 aa9.92□□□□□ -0.82
RFX3-209ENST00000451859 KCNA2P16389 499 aa9.92□□□□□ -0.82
RFX3-209ENST00000451859 IGFBP4P22692 258 aa9.92□□□□□ -0.82
RFX3-209ENST00000451859 CCT2P78371 535 aaKnown RBP9.92□□□□□ -0.82
RFX3-209ENST00000451859 ARHGAP4P98171 946 aa9.92□□□□□ -0.82
RFX3-209ENST00000451859 FUT2Q10981 343 aa9.92□□□□□ -0.82
RFX3-209ENST00000451859 CCDC85BQ15834 202 aaPredicted RBP9.92□□□□□ -0.82
RFX3-209ENST00000451859 TCTN1Q2MV58 587 aa9.92□□□□□ -0.82
RFX3-209ENST00000451859 TRIM71Q2Q1W2 868 aaKnown RBP9.92□□□□□ -0.82
RFX3-209ENST00000451859 JAKMIP3Q5VZ66 844 aa9.92□□□□□ -0.82
RFX3-209ENST00000451859 PPP1R18Q6NYC8 613 aa9.92□□□□□ -0.82
RFX3-209ENST00000451859 XRRA1Q6P2D8 792 aa9.92□□□□□ -0.82
RFX3-209ENST00000451859 MICALL1Q8N3F8 863 aa9.92□□□□□ -0.82
RFX3-209ENST00000451859 USP38Q8NB14 1042 aa9.92□□□□□ -0.82
RFX3-209ENST00000451859 GIMAP8Q8ND71 665 aaPredicted RBP9.92□□□□□ -0.82
RFX3-209ENST00000451859 PHKBQ93100 1093 aa9.92□□□□□ -0.82
RFX3-209ENST00000451859 GPRASP2Q96D09 838 aa9.92□□□□□ -0.82
RFX3-209ENST00000451859 SLC9A7Q96T83 725 aa9.92□□□□□ -0.82
RFX3-209ENST00000451859 LARP6Q9BRS8 491 aaKnown RBP9.92□□□□□ -0.82
RFX3-209ENST00000451859 USP26Q9BXU7 913 aa9.92□□□□□ -0.82
RFX3-209ENST00000451859 ANO3Q9BYT9 981 aa9.92□□□□□ -0.82
RFX3-209ENST00000451859 RNPEPQ9H4A4 650 aa9.92□□□□□ -0.82
RFX3-209ENST00000451859 RIC8AQ9NPQ8 531 aa9.92□□□□□ -0.82
RFX3-209ENST00000451859 RYDENQ9NUL5 291 aaKnown RBP9.92□□□□□ -0.82
RFX3-209ENST00000451859 SETD4Q9NVD3 440 aa9.92□□□□□ -0.82
RFX3-209ENST00000451859 SEPT9Q9UHD8 586 aaPredicted RBP9.92□□□□□ -0.82
RFX3-209ENST00000451859 PCDHA11Q9Y5I1 949 aa9.92□□□□□ -0.82
RFX3-209ENST00000451859 UBIAD1Q9Y5Z9 338 aa9.92□□□□□ -0.82
RFX3-209ENST00000451859 KIAA1671Q9BY89 1806 aa9.91□□□□□ -0.82
RFX3-209ENST00000451859 DDX39AO00148 427 aaKnown RBP9.91□□□□□ -0.82
RFX3-209ENST00000451859 ZNF76P36508 570 aa9.91□□□□□ -0.82
RFX3-209ENST00000451859 WDR5P61964 334 aaKnown RBP9.91□□□□□ -0.82
RFX3-209ENST00000451859 DEFB103AP81534 67 aa9.91□□□□□ -0.82
RFX3-209ENST00000451859 AKAP17AQ02040 695 aaKnown RBP9.91□□□□□ -0.82
RFX3-209ENST00000451859 MBTPS1Q14703 1052 aa9.91□□□□□ -0.82
RFX3-209ENST00000451859 GPNMBQ14956 572 aa9.91□□□□□ -0.82
RFX3-209ENST00000451859 FAM117BQ6P1L5 589 aa9.91□□□□□ -0.82
RFX3-209ENST00000451859 CNKSR3Q6P9H4 555 aa9.91□□□□□ -0.82
RFX3-209ENST00000451859 SERINC5Q86VE9 423 aa9.91□□□□□ -0.82
RFX3-209ENST00000451859 HERC6Q8IVU3 1022 aa9.91□□□□□ -0.82
RFX3-209ENST00000451859 CYP2W1Q8TAV3 490 aa9.91□□□□□ -0.82
RFX3-209ENST00000451859 GLG1Q92896 1179 aa9.91□□□□□ -0.82
RFX3-209ENST00000451859 KCNB2Q92953 911 aa9.91□□□□□ -0.82
RFX3-209ENST00000451859 CDHR1Q96JP9 859 aa9.91□□□□□ -0.82
RFX3-209ENST00000451859 SENP7Q9BQF6 1050 aa9.91□□□□□ -0.82
RFX3-209ENST00000451859 MXRA8Q9BRK3 442 aa9.91□□□□□ -0.82
RFX3-209ENST00000451859 SLC26A6Q9BXS9 759 aa9.91□□□□□ -0.82
RFX3-209ENST00000451859 NCOA5Q9HCD5 579 aaKnown RBP9.91□□□□□ -0.82
RFX3-209ENST00000451859 JADE2Q9NQC1 790 aa9.91□□□□□ -0.82
RFX3-209ENST00000451859 BARHL2Q9NY43 387 aa9.91□□□□□ -0.82
RFX3-209ENST00000451859 ATG2AQ2TAZ0 1938 aa9.91□□□□□ -0.82
RFX3-209ENST00000451859 RALGAPA2Q2PPJ7 1873 aa9.91□□□□□ -0.82
RFX3-209ENST00000451859 VCANP13611 3396 aa9.9□□□□□ -0.82
RFX3-209ENST00000451859 CCDC196A0A1B0GTZ2 297 aa9.9□□□□□ -0.82
RFX3-209ENST00000451859 GSTTP1A0A1W2PQM5 241 aa9.9□□□□□ -0.82
RFX3-209ENST00000451859 LCHNA4D1U4 455 aa9.9□□□□□ -0.82
RFX3-209ENST00000451859 RSPH10B2B2RC85 870 aa9.9□□□□□ -0.82
RFX3-209ENST00000451859 RFXAPO00287 272 aa9.9□□□□□ -0.82
RFX3-209ENST00000451859 ADAMTS3O15072 1205 aa9.9□□□□□ -0.82
RFX3-209ENST00000451859 TLL1O43897 1013 aa9.9□□□□□ -0.82
RFX3-209ENST00000451859 GFRA3O60609 400 aa9.9□□□□□ -0.82
RFX3-209ENST00000451859 BAIAP3O94812 1187 aa9.9□□□□□ -0.82
RFX3-209ENST00000451859 ARHGEF15O94989 841 aa9.9□□□□□ -0.82
RFX3-209ENST00000451859 RSPH10BP0C881 870 aa9.9□□□□□ -0.82
RFX3-209ENST00000451859 ARP10275 920 aa9.9□□□□□ -0.82
RFX3-209ENST00000451859 SCG2P13521 617 aa9.9□□□□□ -0.82
RFX3-209ENST00000451859 PSMA5P28066 241 aa9.9□□□□□ -0.82
RFX3-209ENST00000451859 IGBP1P78318 339 aa9.9□□□□□ -0.82
RFX3-209ENST00000451859 RBL2Q08999 1139 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms