RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 ADAM17P78536 824 aa24.98■■□□□ 1.59
CPSF7-208ENST00000450000 FAM160B1Q5W0V3 765 aa24.98■■□□□ 1.59
CPSF7-208ENST00000450000 RUFY3Q7L099 469 aa24.98■■□□□ 1.59
CPSF7-208ENST00000450000 NIPA1Q7RTP0 329 aa24.98■■□□□ 1.59
CPSF7-208ENST00000450000 TRIM22Q8IYM9 498 aa24.98■■□□□ 1.59
CPSF7-208ENST00000450000 YME1L1Q96TA2 773 aa24.98■■□□□ 1.59
CPSF7-208ENST00000450000 MTCH2Q9Y6C9 303 aa24.98■■□□□ 1.59
CPSF7-208ENST00000450000 GBF1Q92538 1859 aa24.98■■□□□ 1.59
CPSF7-208ENST00000450000 TET1Q8NFU7 2136 aa24.97■■□□□ 1.59
CPSF7-208ENST00000450000 CPLX1O14810 134 aa24.97■■□□□ 1.59
CPSF7-208ENST00000450000 INSRRP14616 1297 aa24.97■■□□□ 1.59
CPSF7-208ENST00000450000 FAM26DQ5JW98 314 aa24.97■■□□□ 1.59
CPSF7-208ENST00000450000 RUFY4Q6ZNE9 571 aa24.97■■□□□ 1.59
CPSF7-208ENST00000450000 PLPPR4Q7Z2D5 763 aa24.97■■□□□ 1.59
CPSF7-208ENST00000450000 DNAJB3Q8WWF6 145 aa24.97■■□□□ 1.59
CPSF7-208ENST00000450000 RNF26Q9BY78 433 aaPredicted RBP24.97■■□□□ 1.59
CPSF7-208ENST00000450000 ZMYND12Q9H0C1 365 aa24.97■■□□□ 1.59
CPSF7-208ENST00000450000 FAM49AQ9H0Q0 323 aaPredicted RBP24.97■■□□□ 1.59
CPSF7-208ENST00000450000 ARHGEF15O94989 841 aa24.96■■□□□ 1.59
CPSF7-208ENST00000450000 SLC26A2P50443 739 aa24.96■■□□□ 1.59
CPSF7-208ENST00000450000 SETQ01105 290 aaPredicted RBP24.96■■□□□ 1.59
CPSF7-208ENST00000450000 GRB10Q13322 594 aa24.96■■□□□ 1.59
CPSF7-208ENST00000450000 AAK1Q2M2I8 961 aa24.96■■□□□ 1.59
CPSF7-208ENST00000450000 IER5Q5VY09 327 aa24.96■■□□□ 1.59
CPSF7-208ENST00000450000 CPLX2Q6PUV4 134 aaKnown RBP24.96■■□□□ 1.59
CPSF7-208ENST00000450000 RPAINQ86UA6 219 aa24.96■■□□□ 1.59
CPSF7-208ENST00000450000 MYO9BQ13459 2157 aa24.95■■□□□ 1.59
CPSF7-208ENST00000450000 CDH23Q9H251 3354 aa24.95■■□□□ 1.58
CPSF7-208ENST00000450000 POTEB3A0JP26 581 aa24.95■■□□□ 1.58
CPSF7-208ENST00000450000 EPOPA6NHQ4 379 aa24.95■■□□□ 1.58
CPSF7-208ENST00000450000 PPFIA3O75145 1194 aa24.95■■□□□ 1.58
CPSF7-208ENST00000450000 GHRP10912 638 aa24.95■■□□□ 1.58
CPSF7-208ENST00000450000 POU3F3P20264 500 aaPredicted RBP24.95■■□□□ 1.58
CPSF7-208ENST00000450000 PDIA3P30101 505 aaKnown RBP24.95■■□□□ 1.58
CPSF7-208ENST00000450000 ITGB3BPQ13352 177 aaPredicted RBP24.95■■□□□ 1.58
CPSF7-208ENST00000450000 MIS18BP1Q6P0N0 1132 aa24.95■■□□□ 1.58
CPSF7-208ENST00000450000 POTEBQ6S5H4 581 aa24.95■■□□□ 1.58
CPSF7-208ENST00000450000 ASB2Q96Q27 587 aa24.95■■□□□ 1.58
CPSF7-208ENST00000450000 ZNF577Q9BSK1 485 aa24.95■■□□□ 1.58
CPSF7-208ENST00000450000 AGXT2Q9BYV1 514 aa24.95■■□□□ 1.58
CPSF7-208ENST00000450000 LINC01553A4QN01 128 aa24.94■■□□□ 1.58
CPSF7-208ENST00000450000 CHRNA1P02708 482 aa24.94■■□□□ 1.58
CPSF7-208ENST00000450000 CYP3A4P08684 503 aa24.94■■□□□ 1.58
CPSF7-208ENST00000450000 IFNAR1P17181 557 aa24.94■■□□□ 1.58
CPSF7-208ENST00000450000 NLRP5P59047 1200 aa24.94■■□□□ 1.58
CPSF7-208ENST00000450000 SSRP1Q08945 709 aaKnown RBP24.94■■□□□ 1.58
CPSF7-208ENST00000450000 PLCB4Q15147 1175 aa24.94■■□□□ 1.58
CPSF7-208ENST00000450000 CKAP2LQ8IYA6 745 aa24.94■■□□□ 1.58
CPSF7-208ENST00000450000 PCYT2Q99447 389 aa24.94■■□□□ 1.58
CPSF7-208ENST00000450000 ZSWIM6Q9HCJ5 1215 aa24.94■■□□□ 1.58
CPSF7-208ENST00000450000 TBC1D22BQ9NU19 505 aa24.94■■□□□ 1.58
CPSF7-208ENST00000450000 CDY2AQ9Y6F7 541 aa24.94■■□□□ 1.58
CPSF7-208ENST00000450000 NID2Q14112 1375 aa24.93■■□□□ 1.58
CPSF7-208ENST00000450000 MBLAC1A4D2B0 266 aaPredicted RBP24.93■■□□□ 1.58
CPSF7-208ENST00000450000 FAM86B1E9PN63 330 aa24.93■■□□□ 1.58
CPSF7-208ENST00000450000 IPO5O00410 1097 aaKnown RBP24.93■■□□□ 1.58
CPSF7-208ENST00000450000 FAM86B2P0C5J1 330 aa24.93■■□□□ 1.58
CPSF7-208ENST00000450000 ERVK-21P61565 698 aa24.93■■□□□ 1.58
CPSF7-208ENST00000450000 MRPS6P82932 125 aaKnown RBP24.93■■□□□ 1.58
CPSF7-208ENST00000450000 PKN1Q16512 942 aa24.93■■□□□ 1.58
CPSF7-208ENST00000450000 GDPD5Q8WTR4 605 aa24.93■■□□□ 1.58
CPSF7-208ENST00000450000 TOP1MTQ969P6 601 aa24.93■■□□□ 1.58
CPSF7-208ENST00000450000 NCOA5Q9HCD5 579 aaKnown RBP24.93■■□□□ 1.58
CPSF7-208ENST00000450000 ZNF302Q9NR11 478 aa24.93■■□□□ 1.58
CPSF7-208ENST00000450000 DOCK5Q9H7D0 1870 aa24.93■■□□□ 1.58
CPSF7-208ENST00000450000 PRR16Q569H4 304 aa24.92■■□□□ 1.58
CPSF7-208ENST00000450000 MARCH8Q5T0T0 291 aa24.92■■□□□ 1.58
CPSF7-208ENST00000450000 PDXDC2PQ6P474 469 aa24.92■■□□□ 1.58
CPSF7-208ENST00000450000 FBXO22Q8NEZ5 403 aa24.92■■□□□ 1.58
CPSF7-208ENST00000450000 SAMD11Q96NU1 681 aa24.92■■□□□ 1.58
CPSF7-208ENST00000450000 UIMC1Q96RL1 719 aa24.92■■□□□ 1.58
CPSF7-208ENST00000450000 LMCD1Q9NZU5 365 aa24.92■■□□□ 1.58
CPSF7-208ENST00000450000 VPS54Q9P1Q0 977 aa24.92■■□□□ 1.58
CPSF7-208ENST00000450000 HBP1O60381 514 aa24.91■■□□□ 1.58
CPSF7-208ENST00000450000 KRT40Q6A162 431 aa24.91■■□□□ 1.58
CPSF7-208ENST00000450000 SPRED2Q7Z698 418 aa24.91■■□□□ 1.58
CPSF7-208ENST00000450000 TM6SF1Q9BZW5 370 aa24.91■■□□□ 1.58
CPSF7-208ENST00000450000 SUGCTQ9HAC7 445 aa24.91■■□□□ 1.58
CPSF7-208ENST00000450000 PDRG1Q9NUG6 133 aa24.91■■□□□ 1.58
CPSF7-208ENST00000450000 PPP4R2Q9NY27 417 aa24.91■■□□□ 1.58
CPSF7-208ENST00000450000 SAMM50Q9Y512 469 aa24.91■■□□□ 1.58
CPSF7-208ENST00000450000 PCDHA2Q9Y5H9 948 aa24.91■■□□□ 1.58
CPSF7-208ENST00000450000 ATG7O95352 703 aa24.9■■□□□ 1.58
CPSF7-208ENST00000450000 HTRA4P83105 476 aaPredicted RBP24.9■■□□□ 1.58
CPSF7-208ENST00000450000 MGAT3Q09327 533 aa24.9■■□□□ 1.58
CPSF7-208ENST00000450000 LPIN1Q14693 890 aa24.9■■□□□ 1.58
CPSF7-208ENST00000450000 NTRK3Q16288 839 aa24.9■■□□□ 1.58
CPSF7-208ENST00000450000 SWSAP1Q6NVH7 229 aa24.9■■□□□ 1.58
CPSF7-208ENST00000450000 TSHZ1Q6ZSZ6 1077 aa24.9■■□□□ 1.58
CPSF7-208ENST00000450000 NME8Q8N427 588 aa24.9■■□□□ 1.58
CPSF7-208ENST00000450000 RASGRP4Q8TDF6 673 aa24.9■■□□□ 1.58
CPSF7-208ENST00000450000 TRAPPC12Q8WVT3 735 aa24.9■■□□□ 1.58
CPSF7-208ENST00000450000 C22orf23Q9BZE7 217 aa24.9■■□□□ 1.58
CPSF7-208ENST00000450000 OSBPL7Q9BZF2 842 aa24.9■■□□□ 1.58
CPSF7-208ENST00000450000 UPF3BQ9BZI7 483 aaKnown RBP24.9■■□□□ 1.58
CPSF7-208ENST00000450000 SH3GLB2Q9NR46 395 aa24.9■■□□□ 1.58
CPSF7-208ENST00000450000 COG5Q9UP83 839 aa24.9■■□□□ 1.58
CPSF7-208ENST00000450000 TRPV2Q9Y5S1 764 aa24.9■■□□□ 1.58
CPSF7-208ENST00000450000 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.89■■□□□ 1.58
CPSF7-208ENST00000450000 CCNE2O96020 404 aa24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms