RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 SERPING1P05155 500 aa10.25□□□□□ -0.77
SYNPO2-204ENST00000448416 ITGA4P13612 1032 aa10.25□□□□□ -0.77
SYNPO2-204ENST00000448416 GNAZP19086 355 aa10.25□□□□□ -0.77
SYNPO2-204ENST00000448416 TRAPPC10P48553 1259 aa10.25□□□□□ -0.77
SYNPO2-204ENST00000448416 CEBPAP49715 358 aaPredicted RBP10.25□□□□□ -0.77
SYNPO2-204ENST00000448416 RCAN1P53805 252 aa10.25□□□□□ -0.77
SYNPO2-204ENST00000448416 ASIC1P78348 528 aa10.25□□□□□ -0.77
SYNPO2-204ENST00000448416 DTHD1Q6ZMT9 781 aa10.25□□□□□ -0.77
SYNPO2-204ENST00000448416 ASRGL1Q7L266 308 aa10.25□□□□□ -0.77
SYNPO2-204ENST00000448416 FGD4Q96M96 766 aa10.25□□□□□ -0.77
SYNPO2-204ENST00000448416 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.25□□□□□ -0.77
SYNPO2-204ENST00000448416 PACSIN1Q9BY11 444 aa10.25□□□□□ -0.77
SYNPO2-204ENST00000448416 ZMYND12Q9H0C1 365 aa10.25□□□□□ -0.77
SYNPO2-204ENST00000448416 FCER1AP12319 257 aa10.25□□□□□ -0.77
SYNPO2-204ENST00000448416 PEX5P50542 639 aa10.25□□□□□ -0.77
SYNPO2-204ENST00000448416 PLS1Q14651 629 aa10.25□□□□□ -0.77
SYNPO2-204ENST00000448416 NEK9Q8TD19 979 aa10.25□□□□□ -0.77
SYNPO2-204ENST00000448416 KIFAP3Q92845 792 aa10.25□□□□□ -0.77
SYNPO2-204ENST00000448416 SLITRK6Q9H5Y7 841 aa10.25□□□□□ -0.77
SYNPO2-204ENST00000448416 PCMTD2Q9NV79 361 aa10.25□□□□□ -0.77
SYNPO2-204ENST00000448416 RGPD8O14715 1765 aaPredicted RBP10.25□□□□□ -0.77
SYNPO2-204ENST00000448416 TMEM94Q12767 1356 aa10.25□□□□□ -0.77
SYNPO2-204ENST00000448416 TCP11X1B4DZS4 312 aa10.24□□□□□ -0.77
SYNPO2-204ENST00000448416 MBD4O95243 580 aa10.24□□□□□ -0.77
SYNPO2-204ENST00000448416 PLEKHA8P1O95397 391 aa10.24□□□□□ -0.77
SYNPO2-204ENST00000448416 USP11P51784 963 aa10.24□□□□□ -0.77
SYNPO2-204ENST00000448416 PPP2R5BQ15173 497 aa10.24□□□□□ -0.77
SYNPO2-204ENST00000448416 FITM2Q8N6M3 262 aa10.24□□□□□ -0.77
SYNPO2-204ENST00000448416 MGARPQ8TDB4 240 aa10.24□□□□□ -0.77
SYNPO2-204ENST00000448416 RXFP1Q9HBX9 757 aa10.24□□□□□ -0.77
SYNPO2-204ENST00000448416 KBTBD4Q9NVX7 518 aa10.24□□□□□ -0.77
SYNPO2-204ENST00000448416 ADAMTS1Q9UHI8 967 aa10.24□□□□□ -0.77
SYNPO2-204ENST00000448416 ARL2BPQ9Y2Y0 163 aa10.24□□□□□ -0.77
SYNPO2-204ENST00000448416 BHMG1C9JSJ3 638 aaPredicted RBP10.24□□□□□ -0.77
SYNPO2-204ENST00000448416 PPP1R2P41236 205 aa10.24□□□□□ -0.77
SYNPO2-204ENST00000448416 MAIP1Q8WWC4 291 aa10.24□□□□□ -0.77
SYNPO2-204ENST00000448416 DTNBP1Q96EV8 351 aa10.24□□□□□ -0.77
SYNPO2-204ENST00000448416 DDX23Q9BUQ8 820 aaKnown RBP10.24□□□□□ -0.77
SYNPO2-204ENST00000448416 PPP1R12CQ9BZL4 782 aa10.24□□□□□ -0.77
SYNPO2-204ENST00000448416 ARMT1Q9H993 441 aa10.24□□□□□ -0.77
SYNPO2-204ENST00000448416 DIP2BQ9P265 1576 aa10.24□□□□□ -0.77
SYNPO2-204ENST00000448416 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.24□□□□□ -0.77
SYNPO2-204ENST00000448416 A0A087X0T9 212 aa10.24□□□□□ -0.77
SYNPO2-204ENST00000448416 E7ENQ6 273 aa10.24□□□□□ -0.77
SYNPO2-204ENST00000448416 CREB3O43889 395 aa10.24□□□□□ -0.77
SYNPO2-204ENST00000448416 FAM228BP0C875 321 aa10.24□□□□□ -0.77
SYNPO2-204ENST00000448416 PMS2P54278 862 aa10.24□□□□□ -0.77
SYNPO2-204ENST00000448416 LRRC14Q15048 493 aa10.24□□□□□ -0.77
SYNPO2-204ENST00000448416 NPY5RQ15761 445 aa10.24□□□□□ -0.77
SYNPO2-204ENST00000448416 SLC18A3Q16572 532 aa10.24□□□□□ -0.77
SYNPO2-204ENST00000448416 C6orf118Q5T5N4 469 aa10.24□□□□□ -0.77
SYNPO2-204ENST00000448416 DAAM2Q86T65 1068 aa10.24□□□□□ -0.77
SYNPO2-204ENST00000448416 METTL13Q8N6R0 699 aa10.24□□□□□ -0.77
SYNPO2-204ENST00000448416 UHMK1Q8TAS1 419 aaKnown RBP10.24□□□□□ -0.77
SYNPO2-204ENST00000448416 STK32AQ8WU08 396 aa10.24□□□□□ -0.77
SYNPO2-204ENST00000448416 DNAJC9Q8WXX5 260 aa10.24□□□□□ -0.77
SYNPO2-204ENST00000448416 TRIM51Q9BSJ1 452 aa10.24□□□□□ -0.77
SYNPO2-204ENST00000448416 SLC52A2Q9HAB3 445 aa10.24□□□□□ -0.77
SYNPO2-204ENST00000448416 AMOTL2Q9Y2J4 779 aa10.24□□□□□ -0.77
SYNPO2-204ENST00000448416 SPATA31A3Q5VYP0 1347 aa10.24□□□□□ -0.77
SYNPO2-204ENST00000448416 AGTP01019 485 aa10.24□□□□□ -0.77
SYNPO2-204ENST00000448416 PCCAP05165 728 aaPredicted RBP10.24□□□□□ -0.77
SYNPO2-204ENST00000448416 IMPDH2P12268 514 aa10.24□□□□□ -0.77
SYNPO2-204ENST00000448416 SLCO1A2P46721 670 aa10.24□□□□□ -0.77
SYNPO2-204ENST00000448416 CNGA2Q16280 664 aa10.24□□□□□ -0.77
SYNPO2-204ENST00000448416 MUM1Q2TAK8 710 aa10.24□□□□□ -0.77
SYNPO2-204ENST00000448416 PIGOQ8TEQ8 1089 aa10.24□□□□□ -0.77
SYNPO2-204ENST00000448416 EDEM3Q9BZQ6 932 aa10.24□□□□□ -0.77
SYNPO2-204ENST00000448416 PABPC3Q9H361 631 aaKnown RBP10.24□□□□□ -0.77
SYNPO2-204ENST00000448416 SCOCQ9UIL1 159 aa10.24□□□□□ -0.77
SYNPO2-204ENST00000448416 RTL9Q8NET4 1388 aa10.24□□□□□ -0.77
SYNPO2-204ENST00000448416 LAMB4A4D0S4 1761 aa10.23□□□□□ -0.77
SYNPO2-204ENST00000448416 H0Y3Z8 333 aa10.23□□□□□ -0.77
SYNPO2-204ENST00000448416 OAS1P00973 400 aaKnown RBP10.23□□□□□ -0.77
SYNPO2-204ENST00000448416 NUDT17P0C025 328 aa10.23□□□□□ -0.77
SYNPO2-204ENST00000448416 SPDYCQ5MJ68 293 aa10.23□□□□□ -0.77
SYNPO2-204ENST00000448416 NUDCD1Q96RS6 583 aa10.23□□□□□ -0.77
SYNPO2-204ENST00000448416 NACAP1Q9BZK3 213 aa10.23□□□□□ -0.77
SYNPO2-204ENST00000448416 SEMA6BQ9H3T3 888 aa10.23□□□□□ -0.77
SYNPO2-204ENST00000448416 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.23□□□□□ -0.77
SYNPO2-204ENST00000448416 ATP6V0A2Q9Y487 856 aa10.23□□□□□ -0.77
SYNPO2-204ENST00000448416 BAZ2BQ9UIF8 2168 aaKnown RBP10.23□□□□□ -0.77
SYNPO2-204ENST00000448416 TNKSO95271 1327 aa10.23□□□□□ -0.77
SYNPO2-204ENST00000448416 O00370 1275 aa10.23□□□□□ -0.77
SYNPO2-204ENST00000448416 TPBGLP0DKB5 382 aa10.23□□□□□ -0.77
SYNPO2-204ENST00000448416 DIXDC1Q155Q3 683 aa10.23□□□□□ -0.77
SYNPO2-204ENST00000448416 METTL24Q5JXM2 366 aa10.23□□□□□ -0.77
SYNPO2-204ENST00000448416 TAOK1Q7L7X3 1001 aa10.23□□□□□ -0.77
SYNPO2-204ENST00000448416 SDCCAG8Q86SQ7 713 aaPredicted RBP10.23□□□□□ -0.77
SYNPO2-204ENST00000448416 NCAPG2Q86XI2 1143 aa10.23□□□□□ -0.77
SYNPO2-204ENST00000448416 HPS3Q969F9 1004 aa10.23□□□□□ -0.77
SYNPO2-204ENST00000448416 UBE2OQ9C0C9 1292 aaKnown RBP10.23□□□□□ -0.77
SYNPO2-204ENST00000448416 STMN4Q9H169 189 aaPredicted RBP10.23□□□□□ -0.77
SYNPO2-204ENST00000448416 RGPD2P0DJD1 1756 aa10.23□□□□□ -0.77
SYNPO2-204ENST00000448416 TLR2O60603 784 aa10.23□□□□□ -0.77
SYNPO2-204ENST00000448416 FGFR1OPO95684 399 aaKnown RBP10.23□□□□□ -0.77
SYNPO2-204ENST00000448416 ACADSP16219 412 aa10.23□□□□□ -0.77
SYNPO2-204ENST00000448416 KLHL30Q0D2K2 578 aa10.23□□□□□ -0.77
SYNPO2-204ENST00000448416 RAPGEF1Q13905 1077 aa10.23□□□□□ -0.77
SYNPO2-204ENST00000448416 SLC29A2Q14542 456 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms