RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 CCDC89Q8N998 374 aa4.64□□□□□ -1.67
PMS1-216ENST00000447734 ZNF610Q8N9Z0 462 aa4.64□□□□□ -1.67
PMS1-216ENST00000447734 C1orf131Q8NDD1 294 aaKnown RBP4.64□□□□□ -1.67
PMS1-216ENST00000447734 PPP1R35Q8TAP8 253 aa4.64□□□□□ -1.67
PMS1-216ENST00000447734 LENG1Q96BZ8 264 aaPredicted RBP4.64□□□□□ -1.67
PMS1-216ENST00000447734 APOL5Q9BWW9 433 aa4.64□□□□□ -1.67
PMS1-216ENST00000447734 TMPRSS13Q9BYE2 586 aa4.64□□□□□ -1.67
PMS1-216ENST00000447734 TMEM60Q9H2L4 133 aa4.64□□□□□ -1.67
PMS1-216ENST00000447734 SMOC1Q9H4F8 434 aa4.64□□□□□ -1.67
PMS1-216ENST00000447734 CYP4F12Q9HCS2 524 aa4.64□□□□□ -1.67
PMS1-216ENST00000447734 CHST7Q9NS84 486 aa4.64□□□□□ -1.67
PMS1-216ENST00000447734 KCNK4Q9NYG8 393 aa4.64□□□□□ -1.67
PMS1-216ENST00000447734 RTEL1Q9NZ71 1219 aa4.64□□□□□ -1.67
PMS1-216ENST00000447734 CLEC1BQ9P126 229 aa4.64□□□□□ -1.67
PMS1-216ENST00000447734 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.64□□□□□ -1.67
PMS1-216ENST00000447734 PGAP2Q9UHJ9 254 aa4.64□□□□□ -1.67
PMS1-216ENST00000447734 PCOLCE2Q9UKZ9 415 aa4.64□□□□□ -1.67
PMS1-216ENST00000447734 CBLCQ9ULV8 474 aa4.64□□□□□ -1.67
PMS1-216ENST00000447734 POLHQ9Y253 713 aa4.64□□□□□ -1.67
PMS1-216ENST00000447734 SLC12A8A0AV02 714 aa4.63□□□□□ -1.67
PMS1-216ENST00000447734 EPB41L2O43491 1005 aaKnown RBP4.63□□□□□ -1.67
PMS1-216ENST00000447734 TUSC2O75896 110 aa4.63□□□□□ -1.67
PMS1-216ENST00000447734 PRAMEF1O95521 474 aa4.63□□□□□ -1.67
PMS1-216ENST00000447734 C5AR1P21730 350 aa4.63□□□□□ -1.67
PMS1-216ENST00000447734 GRK3P35626 688 aa4.63□□□□□ -1.67
PMS1-216ENST00000447734 ASPAP45381 313 aa4.63□□□□□ -1.67
PMS1-216ENST00000447734 SMAD3P84022 425 aaKnown RBP4.63□□□□□ -1.67
PMS1-216ENST00000447734 IRF9Q00978 393 aa4.63□□□□□ -1.67
PMS1-216ENST00000447734 KIF23Q02241 960 aaPredicted RBP4.63□□□□□ -1.67
PMS1-216ENST00000447734 TNFAIP2Q03169 654 aa4.63□□□□□ -1.67
PMS1-216ENST00000447734 SOX4Q06945 474 aaPredicted RBP4.63□□□□□ -1.67
PMS1-216ENST00000447734 SMAD2Q15796 467 aaKnown RBP4.63□□□□□ -1.67
PMS1-216ENST00000447734 TUBB8Q3ZCM7 444 aa4.63□□□□□ -1.67
PMS1-216ENST00000447734 TRAPPC3LQ5T215 181 aa4.63□□□□□ -1.67
PMS1-216ENST00000447734 IQCEQ6IPM2 695 aa4.63□□□□□ -1.67
PMS1-216ENST00000447734 IGF2-ASQ6U949 168 aa4.63□□□□□ -1.67
PMS1-216ENST00000447734 FRMD7Q6ZUT3 714 aa4.63□□□□□ -1.67
PMS1-216ENST00000447734 MAATS1Q7Z4T9 603 aa4.63□□□□□ -1.67
PMS1-216ENST00000447734 SAPCD2Q86UD0 394 aa4.63□□□□□ -1.67
PMS1-216ENST00000447734 DENND1CQ8IV53 801 aa4.63□□□□□ -1.67
PMS1-216ENST00000447734 DRC7Q8IY82 874 aa4.63□□□□□ -1.67
PMS1-216ENST00000447734 DCAF11Q8TEB1 546 aa4.63□□□□□ -1.67
PMS1-216ENST00000447734 TP53INP1Q96A56 240 aa4.63□□□□□ -1.67
PMS1-216ENST00000447734 C1GALT1C1Q96EU7 318 aa4.63□□□□□ -1.67
PMS1-216ENST00000447734 MVB12AQ96EY5 273 aa4.63□□□□□ -1.67
PMS1-216ENST00000447734 TBATAQ96M53 351 aa4.63□□□□□ -1.67
PMS1-216ENST00000447734 ACAP3Q96P50 834 aa4.63□□□□□ -1.67
PMS1-216ENST00000447734 ELF4Q99607 663 aaPredicted RBP4.63□□□□□ -1.67
PMS1-216ENST00000447734 B3GNT5Q9BYG0 378 aa4.63□□□□□ -1.67
PMS1-216ENST00000447734 WDR12Q9GZL7 423 aaKnown RBP4.63□□□□□ -1.67
PMS1-216ENST00000447734 ASCC2Q9H1I8 757 aaPredicted RBP4.63□□□□□ -1.67
PMS1-216ENST00000447734 MS4A5Q9H3V2 200 aa4.63□□□□□ -1.67
PMS1-216ENST00000447734 MINPP1Q9UNW1 487 aa4.63□□□□□ -1.67
PMS1-216ENST00000447734 RABGAP1Q9Y3P9 1069 aa4.63□□□□□ -1.67
PMS1-216ENST00000447734 GPR45Q9Y5Y3 372 aa4.63□□□□□ -1.67
PMS1-216ENST00000447734 KAT6BQ8WYB5 2073 aa4.63□□□□□ -1.67
PMS1-216ENST00000447734 H3BML4 177 aa4.62□□□□□ -1.67
PMS1-216ENST00000447734 ARNTLO00327 626 aa4.62□□□□□ -1.67
PMS1-216ENST00000447734 GOLIM4O00461 696 aa4.62□□□□□ -1.67
PMS1-216ENST00000447734 DLL1O00548 723 aa4.62□□□□□ -1.67
PMS1-216ENST00000447734 TLR5O60602 858 aa4.62□□□□□ -1.67
PMS1-216ENST00000447734 DTNBO60941 627 aa4.62□□□□□ -1.67
PMS1-216ENST00000447734 LRRN2O75325 713 aa4.62□□□□□ -1.67
PMS1-216ENST00000447734 RHOBTB3O94955 611 aa4.62□□□□□ -1.67
PMS1-216ENST00000447734 OSMP13725 252 aa4.62□□□□□ -1.67
PMS1-216ENST00000447734 HSD3B1P14060 373 aa4.62□□□□□ -1.67
PMS1-216ENST00000447734 IFNGR1P15260 489 aa4.62□□□□□ -1.67
PMS1-216ENST00000447734 ELNP15502 786 aa4.62□□□□□ -1.67
PMS1-216ENST00000447734 KRT15P19012 456 aa4.62□□□□□ -1.67
PMS1-216ENST00000447734 AGXTP21549 392 aa4.62□□□□□ -1.67
PMS1-216ENST00000447734 PEX2P28328 305 aa4.62□□□□□ -1.67
PMS1-216ENST00000447734 NOP2P46087 812 aaKnown RBP4.62□□□□□ -1.67
PMS1-216ENST00000447734 CACNB3P54284 484 aa4.62□□□□□ -1.67
PMS1-216ENST00000447734 SRSF2Q01130 221 aaKnown RBP4.62□□□□□ -1.67
PMS1-216ENST00000447734 POU5F1Q01860 360 aaKnown RBP4.62□□□□□ -1.67
PMS1-216ENST00000447734 TBX2Q13207 712 aaPredicted RBP4.62□□□□□ -1.67
PMS1-216ENST00000447734 CNGB1Q14028 1251 aaPredicted RBP4.62□□□□□ -1.67
PMS1-216ENST00000447734 PDCD1Q15116 288 aa4.62□□□□□ -1.67
PMS1-216ENST00000447734 UAP1L1Q3KQV9 507 aa4.62□□□□□ -1.67
PMS1-216ENST00000447734 RNF220Q5VTB9 566 aa4.62□□□□□ -1.67
PMS1-216ENST00000447734 MZT2AQ6P582 158 aa4.62□□□□□ -1.67
PMS1-216ENST00000447734 CRTC3Q6UUV7 619 aa4.62□□□□□ -1.67
PMS1-216ENST00000447734 DMRTC2Q8IXT2 367 aaPredicted RBP4.62□□□□□ -1.67
PMS1-216ENST00000447734 OR2C3Q8N628 320 aa4.62□□□□□ -1.67
PMS1-216ENST00000447734 RCBTB1Q8NDN9 531 aa4.62□□□□□ -1.67
PMS1-216ENST00000447734 GCC1Q96CN9 775 aa4.62□□□□□ -1.67
PMS1-216ENST00000447734 CDK5RAP3Q96JB5 506 aa4.62□□□□□ -1.67
PMS1-216ENST00000447734 RIPOR3Q96MK2 946 aa4.62□□□□□ -1.67
PMS1-216ENST00000447734 ISCA1Q9BUE6 129 aa4.62□□□□□ -1.67
PMS1-216ENST00000447734 NUP62CLQ9H1M0 184 aa4.62□□□□□ -1.67
PMS1-216ENST00000447734 MYLK2Q9H1R3 596 aa4.62□□□□□ -1.67
PMS1-216ENST00000447734 VPS11Q9H270 941 aa4.62□□□□□ -1.67
PMS1-216ENST00000447734 BHMT2Q9H2M3 363 aa4.62□□□□□ -1.67
PMS1-216ENST00000447734 PCDHA2Q9Y5H9 948 aa4.62□□□□□ -1.67
PMS1-216ENST00000447734 SLC4A7Q9Y6M7 1214 aa4.62□□□□□ -1.67
PMS1-216ENST00000447734 LCHNA4D1U4 455 aa4.61□□□□□ -1.67
PMS1-216ENST00000447734 MEGF11A6BM72 1044 aa4.61□□□□□ -1.67
PMS1-216ENST00000447734 LRRC10BA6NIK2 292 aa4.61□□□□□ -1.67
PMS1-216ENST00000447734 PRSS47A8MTI9 375 aa4.61□□□□□ -1.67
PMS1-216ENST00000447734 ZNF561-AS1K7EIQ3 104 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms