RNA–Protein interactions for RNA: ENST00000447683.2

OTUB1-204, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 2

Gene OTUB1, Length 2,315 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-204ENST00000447683 ADAM9Q13443 819 aa17.96■□□□□ 0.47
OTUB1-204ENST00000447683 CCDC174Q6PII3 467 aa17.96■□□□□ 0.47
OTUB1-204ENST00000447683 OTOP1Q7RTM1 612 aa17.96■□□□□ 0.47
OTUB1-204ENST00000447683 KRT26Q7Z3Y9 468 aa17.96■□□□□ 0.47
OTUB1-204ENST00000447683 SYN2Q92777 582 aaPredicted RBP17.96■□□□□ 0.47
OTUB1-204ENST00000447683 SLC5A5Q92911 643 aa17.96■□□□□ 0.47
OTUB1-204ENST00000447683 HSD17B14Q9BPX1 270 aa17.96■□□□□ 0.47
OTUB1-204ENST00000447683 TMEM39BQ9GZU3 492 aa17.96■□□□□ 0.47
OTUB1-204ENST00000447683 NUCKS1Q9H1E3 243 aaKnown RBP17.96■□□□□ 0.47
OTUB1-204ENST00000447683 ZHX3Q9H4I2 956 aa17.96■□□□□ 0.47
OTUB1-204ENST00000447683 SH2D4AQ9H788 454 aa17.96■□□□□ 0.47
OTUB1-204ENST00000447683 TUFT1Q9NNX1 390 aa17.96■□□□□ 0.47
OTUB1-204ENST00000447683 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.96■□□□□ 0.47
OTUB1-204ENST00000447683 SSU72P8A0A1W2PR75 194 aa17.95■□□□□ 0.46
OTUB1-204ENST00000447683 ANO9A1A5B4 782 aa17.95■□□□□ 0.46
OTUB1-204ENST00000447683 CETN3O15182 167 aa17.95■□□□□ 0.46
OTUB1-204ENST00000447683 ATP1A1P05023 1023 aaKnown RBP17.95■□□□□ 0.46
OTUB1-204ENST00000447683 HOXD13P35453 343 aa17.95■□□□□ 0.46
OTUB1-204ENST00000447683 CYP4A11Q02928 519 aa17.95■□□□□ 0.46
OTUB1-204ENST00000447683 PPP2R5CQ13362 524 aa17.95■□□□□ 0.46
OTUB1-204ENST00000447683 KNOP1Q1ED39 458 aaKnown RBP17.95■□□□□ 0.46
OTUB1-204ENST00000447683 BMT2Q1RMZ1 405 aa17.95■□□□□ 0.46
OTUB1-204ENST00000447683 ASTE1Q2TB18 679 aaPredicted RBP17.95■□□□□ 0.46
OTUB1-204ENST00000447683 ARFGAP3Q9NP61 516 aa17.95■□□□□ 0.46
OTUB1-204ENST00000447683 RABGAP1Q9Y3P9 1069 aa17.95■□□□□ 0.46
OTUB1-204ENST00000447683 PCDHA13Q9Y5I0 950 aa17.95■□□□□ 0.46
OTUB1-204ENST00000447683 TBC1D8O95759 1140 aa17.95■□□□□ 0.46
OTUB1-204ENST00000447683 PLA2G4AP47712 749 aa17.95■□□□□ 0.46
OTUB1-204ENST00000447683 CACNA2D4Q7Z3S7 1137 aa17.95■□□□□ 0.46
OTUB1-204ENST00000447683 DEFB129Q9H1M3 183 aa17.95■□□□□ 0.46
OTUB1-204ENST00000447683 BHMT2Q9H2M3 363 aa17.95■□□□□ 0.46
OTUB1-204ENST00000447683 FEM1BQ9UK73 627 aa17.95■□□□□ 0.46
OTUB1-204ENST00000447683 SAR1BQ9Y6B6 198 aa17.95■□□□□ 0.46
OTUB1-204ENST00000447683 DUSP10Q9Y6W6 482 aa17.95■□□□□ 0.46
OTUB1-204ENST00000447683 ENC1O14682 589 aa17.94■□□□□ 0.46
OTUB1-204ENST00000447683 USO1O60763 962 aaKnown RBP17.94■□□□□ 0.46
OTUB1-204ENST00000447683 HGSNATQ68CP4 663 aa17.94■□□□□ 0.46
OTUB1-204ENST00000447683 HNRNPLLQ8WVV9 542 aaKnown RBP17.94■□□□□ 0.46
OTUB1-204ENST00000447683 RUSC1Q9BVN2 902 aa17.94■□□□□ 0.46
OTUB1-204ENST00000447683 IFIH1Q9BYX4 1025 aaKnown RBP17.94■□□□□ 0.46
OTUB1-204ENST00000447683 EHMT1Q9H9B1 1298 aa17.94■□□□□ 0.46
OTUB1-204ENST00000447683 RGL1Q9NZL6 768 aa17.94■□□□□ 0.46
OTUB1-204ENST00000447683 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.94■□□□□ 0.46
OTUB1-204ENST00000447683 RGS17Q9UGC6 210 aaPredicted RBP17.94■□□□□ 0.46
OTUB1-204ENST00000447683 PDXKO00764 312 aa17.94■□□□□ 0.46
OTUB1-204ENST00000447683 NR2F2P24468 414 aa17.94■□□□□ 0.46
OTUB1-204ENST00000447683 LRCH2Q5VUJ6 765 aa17.94■□□□□ 0.46
OTUB1-204ENST00000447683 MIGA2Q7L4E1 593 aa17.94■□□□□ 0.46
OTUB1-204ENST00000447683 FRMD5Q7Z6J6 570 aa17.94■□□□□ 0.46
OTUB1-204ENST00000447683 NIM1KQ8IY84 436 aa17.94■□□□□ 0.46
OTUB1-204ENST00000447683 HDAC6Q9UBN7 1215 aa17.94■□□□□ 0.46
OTUB1-204ENST00000447683 LOXHD1Q8IVV2 1947 aa17.94■□□□□ 0.46
OTUB1-204ENST00000447683 PJA2O43164 708 aa17.93■□□□□ 0.46
OTUB1-204ENST00000447683 SLITRK3O94933 977 aa17.93■□□□□ 0.46
OTUB1-204ENST00000447683 MUTP22033 750 aa17.93■□□□□ 0.46
OTUB1-204ENST00000447683 RINT1Q6NUQ1 792 aa17.93■□□□□ 0.46
OTUB1-204ENST00000447683 LSM14BQ9BX40 385 aaKnown RBP17.93■□□□□ 0.46
OTUB1-204ENST00000447683 DEF6Q9H4E7 631 aa17.93■□□□□ 0.46
OTUB1-204ENST00000447683 OLFML3Q9NRN5 406 aa17.93■□□□□ 0.46
OTUB1-204ENST00000447683 RSPH10B2B2RC85 870 aa17.93■□□□□ 0.46
OTUB1-204ENST00000447683 AKR1B10O60218 316 aa17.93■□□□□ 0.46
OTUB1-204ENST00000447683 RSPH10BP0C881 870 aa17.93■□□□□ 0.46
OTUB1-204ENST00000447683 MYBP10242 640 aa17.93■□□□□ 0.46
OTUB1-204ENST00000447683 CEP55Q53EZ4 464 aa17.93■□□□□ 0.46
OTUB1-204ENST00000447683 LDHDQ86WU2 507 aa17.93■□□□□ 0.46
OTUB1-204ENST00000447683 PNKPQ96T60 521 aa17.93■□□□□ 0.46
OTUB1-204ENST00000447683 GLIS2Q9BZE0 524 aaPredicted RBP17.93■□□□□ 0.46
OTUB1-204ENST00000447683 RBAK-RBAKDNI3L0D1 243 aa17.92■□□□□ 0.46
OTUB1-204ENST00000447683 CALUO43852 315 aaPredicted RBP17.92■□□□□ 0.46
OTUB1-204ENST00000447683 SASH3O75995 380 aa17.92■□□□□ 0.46
OTUB1-204ENST00000447683 ASNSP08243 561 aa17.92■□□□□ 0.46
OTUB1-204ENST00000447683 GAP43P17677 238 aa17.92■□□□□ 0.46
OTUB1-204ENST00000447683 CXCL9Q07325 125 aa17.92■□□□□ 0.46
OTUB1-204ENST00000447683 KCNH2Q12809 1159 aa17.92■□□□□ 0.46
OTUB1-204ENST00000447683 ZYXQ15942 572 aaKnown RBP17.92■□□□□ 0.46
OTUB1-204ENST00000447683 TRIM58Q8NG06 486 aa17.92■□□□□ 0.46
OTUB1-204ENST00000447683 FUT8Q9BYC5 575 aa17.92■□□□□ 0.46
OTUB1-204ENST00000447683 TYW1Q9NV66 732 aaKnown RBP17.92■□□□□ 0.46
OTUB1-204ENST00000447683 FBXO28Q9NVF7 368 aa17.92■□□□□ 0.46
OTUB1-204ENST00000447683 MACROD2A1Z1Q3 448 aa17.92■□□□□ 0.46
OTUB1-204ENST00000447683 WNT10BO00744 389 aa17.92■□□□□ 0.46
OTUB1-204ENST00000447683 TLR2O60603 784 aa17.92■□□□□ 0.46
OTUB1-204ENST00000447683 TBCAO75347 108 aaKnown RBP17.92■□□□□ 0.46
OTUB1-204ENST00000447683 PRPF6O94906 941 aaKnown RBP17.92■□□□□ 0.46
OTUB1-204ENST00000447683 TUBBP07437 444 aa17.92■□□□□ 0.46
OTUB1-204ENST00000447683 PTGER2P43116 358 aa17.92■□□□□ 0.46
OTUB1-204ENST00000447683 PRELPP51888 382 aa17.92■□□□□ 0.46
OTUB1-204ENST00000447683 CTTNQ14247 550 aaKnown RBP17.92■□□□□ 0.46
OTUB1-204ENST00000447683 SFMBT2Q5VUG0 894 aa17.92■□□□□ 0.46
OTUB1-204ENST00000447683 POTEAQ6S8J7 498 aa17.92■□□□□ 0.46
OTUB1-204ENST00000447683 SAMD1Q6SPF0 538 aaPredicted RBP17.92■□□□□ 0.46
OTUB1-204ENST00000447683 NOA1Q8NC60 698 aaKnown RBP17.92■□□□□ 0.46
OTUB1-204ENST00000447683 DYDC2Q96IM9 177 aa17.92■□□□□ 0.46
OTUB1-204ENST00000447683 UBXN6Q9BZV1 441 aa17.92■□□□□ 0.46
OTUB1-204ENST00000447683 NLRC4Q9NPP4 1024 aa17.92■□□□□ 0.46
OTUB1-204ENST00000447683 FER1L6Q2WGJ9 1857 aa17.91■□□□□ 0.46
OTUB1-204ENST00000447683 SERPING1P05155 500 aa17.91■□□□□ 0.46
OTUB1-204ENST00000447683 LONRF2Q1L5Z9 754 aa17.91■□□□□ 0.46
OTUB1-204ENST00000447683 B3GNT9Q6UX72 402 aa17.91■□□□□ 0.46
OTUB1-204ENST00000447683 C1orf186Q6ZWK4 172 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms