RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 MYO3BQ8WXR4 1341 aa20.92■□□□□ 0.94
SDCBP-204ENST00000447182 INPP5BP32019 993 aa20.92■□□□□ 0.94
SDCBP-204ENST00000447182 PTK2Q05397 1052 aa20.92■□□□□ 0.94
SDCBP-204ENST00000447182 LRRC57Q8N9N7 239 aa20.92■□□□□ 0.94
SDCBP-204ENST00000447182 GLT8D2Q9H1C3 349 aa20.92■□□□□ 0.94
SDCBP-204ENST00000447182 HDAC9Q9UKV0 1011 aa20.92■□□□□ 0.94
SDCBP-204ENST00000447182 SAMM50Q9Y512 469 aa20.92■□□□□ 0.94
SDCBP-204ENST00000447182 NPHP3-ACAD11A0A0J9YXS1 232 aa20.91■□□□□ 0.94
SDCBP-204ENST00000447182 POTEB3A0JP26 581 aa20.91■□□□□ 0.94
SDCBP-204ENST00000447182 POTECB2RU33 542 aa20.91■□□□□ 0.94
SDCBP-204ENST00000447182 KCNK3O14649 394 aa20.91■□□□□ 0.94
SDCBP-204ENST00000447182 PPP1R37O75864 691 aa20.91■□□□□ 0.94
SDCBP-204ENST00000447182 PRKCIP41743 596 aa20.91■□□□□ 0.94
SDCBP-204ENST00000447182 SLC12A3P55017 1021 aa20.91■□□□□ 0.94
SDCBP-204ENST00000447182 POTEBQ6S5H4 581 aa20.91■□□□□ 0.94
SDCBP-204ENST00000447182 DPP8Q6V1X1 898 aaPredicted RBP20.91■□□□□ 0.94
SDCBP-204ENST00000447182 ZNF571Q7Z3V5 609 aaPredicted RBP20.91■□□□□ 0.94
SDCBP-204ENST00000447182 GGA1Q9UJY5 639 aa20.91■□□□□ 0.94
SDCBP-204ENST00000447182 CYP3A7-CYP3A51PA0A087WV96 503 aa20.9■□□□□ 0.94
SDCBP-204ENST00000447182 ZBTB48P10074 688 aaPredicted RBP20.9■□□□□ 0.94
SDCBP-204ENST00000447182 UCHL3P15374 230 aa20.9■□□□□ 0.94
SDCBP-204ENST00000447182 CYP3A7P24462 503 aa20.9■□□□□ 0.94
SDCBP-204ENST00000447182 NR2F2P24468 414 aa20.9■□□□□ 0.94
SDCBP-204ENST00000447182 ECHS1P30084 290 aa20.9■□□□□ 0.94
SDCBP-204ENST00000447182 ITGB3BPQ13352 177 aaPredicted RBP20.9■□□□□ 0.94
SDCBP-204ENST00000447182 TRADDQ15628 312 aa20.9■□□□□ 0.94
SDCBP-204ENST00000447182 ARSHQ5FYA8 562 aa20.9■□□□□ 0.94
SDCBP-204ENST00000447182 PTF1AQ7RTS3 328 aa20.9■□□□□ 0.94
SDCBP-204ENST00000447182 YTHDF3Q7Z739 585 aaKnown RBP20.9■□□□□ 0.94
SDCBP-204ENST00000447182 CNBD1Q8NA66 436 aa20.9■□□□□ 0.94
SDCBP-204ENST00000447182 MBOAT7Q96N66 472 aa20.9■□□□□ 0.94
SDCBP-204ENST00000447182 PLAAQ9Y263 795 aa20.9■□□□□ 0.94
SDCBP-204ENST00000447182 DAGLAQ9Y4D2 1042 aa20.9■□□□□ 0.94
SDCBP-204ENST00000447182 MDH1P40925 334 aaKnown RBP20.9■□□□□ 0.94
SDCBP-204ENST00000447182 EIF6P56537 245 aaKnown RBP20.9■□□□□ 0.94
SDCBP-204ENST00000447182 ERVK-9P63128 1117 aa20.9■□□□□ 0.94
SDCBP-204ENST00000447182 PTGISQ16647 500 aa20.9■□□□□ 0.94
SDCBP-204ENST00000447182 IPO4Q8TEX9 1081 aaKnown RBP20.9■□□□□ 0.94
SDCBP-204ENST00000447182 KAT2BQ92831 832 aa20.9■□□□□ 0.94
SDCBP-204ENST00000447182 TMBIM4Q9HC24 238 aa20.9■□□□□ 0.94
SDCBP-204ENST00000447182 NAGPAQ9UK23 515 aa20.9■□□□□ 0.94
SDCBP-204ENST00000447182 FBXL5Q9UKA1 691 aa20.9■□□□□ 0.94
SDCBP-204ENST00000447182 NENFQ9UMX5 172 aa20.9■□□□□ 0.94
SDCBP-204ENST00000447182 RNASE9P60153 205 aaKnown RBP20.89■□□□□ 0.94
SDCBP-204ENST00000447182 GUCY1A3Q02108 690 aa20.89■□□□□ 0.94
SDCBP-204ENST00000447182 TTBK2Q6IQ55 1244 aa20.89■□□□□ 0.94
SDCBP-204ENST00000447182 KLHL7Q8IXQ5 586 aa20.89■□□□□ 0.94
SDCBP-204ENST00000447182 DHX36Q9H2U1 1008 aaKnown RBP20.89■□□□□ 0.94
SDCBP-204ENST00000447182 ARMCX3Q9UH62 379 aaPredicted RBP20.89■□□□□ 0.94
SDCBP-204ENST00000447182 GGA2Q9UJY4 613 aa20.89■□□□□ 0.94
SDCBP-204ENST00000447182 BTAF1O14981 1849 aa20.89■□□□□ 0.93
SDCBP-204ENST00000447182 MEFVO15553 781 aaPredicted RBP20.89■□□□□ 0.93
SDCBP-204ENST00000447182 AFPP02771 609 aaKnown RBP20.89■□□□□ 0.93
SDCBP-204ENST00000447182 CACNB1Q02641 598 aaPredicted RBP20.89■□□□□ 0.93
SDCBP-204ENST00000447182 ENOX2Q16206 610 aaKnown RBP20.89■□□□□ 0.93
SDCBP-204ENST00000447182 NAA35Q5VZE5 725 aa20.89■□□□□ 0.93
SDCBP-204ENST00000447182 MOXD1Q6UVY6 613 aa20.89■□□□□ 0.93
SDCBP-204ENST00000447182 MICALCLQ6ZW33 695 aa20.89■□□□□ 0.93
SDCBP-204ENST00000447182 CLEC10AQ8IUN9 316 aa20.89■□□□□ 0.93
SDCBP-204ENST00000447182 SLFN12Q8IYM2 578 aa20.89■□□□□ 0.93
SDCBP-204ENST00000447182 CERKQ8TCT0 537 aa20.89■□□□□ 0.93
SDCBP-204ENST00000447182 LRRC45Q96CN5 670 aa20.89■□□□□ 0.93
SDCBP-204ENST00000447182 SPAG5Q96R06 1193 aa20.89■□□□□ 0.93
SDCBP-204ENST00000447182 MED24O75448 989 aa20.88■□□□□ 0.93
SDCBP-204ENST00000447182 ACTN1P12814 892 aa20.88■□□□□ 0.93
SDCBP-204ENST00000447182 SLC9A1P19634 815 aa20.88■□□□□ 0.93
SDCBP-204ENST00000447182 PON1P27169 355 aa20.88■□□□□ 0.93
SDCBP-204ENST00000447182 EXOC3L4Q17RC7 722 aa20.88■□□□□ 0.93
SDCBP-204ENST00000447182 CRY2Q49AN0 593 aa20.88■□□□□ 0.93
SDCBP-204ENST00000447182 ALKBH5Q6P6C2 394 aaKnown RBP20.88■□□□□ 0.93
SDCBP-204ENST00000447182 EPM2AIP1Q7L775 607 aaPredicted RBP20.88■□□□□ 0.93
SDCBP-204ENST00000447182 SLFN11Q7Z7L1 901 aa20.88■□□□□ 0.93
SDCBP-204ENST00000447182 RPGRQ92834 1020 aaKnown RBP20.88■□□□□ 0.93
SDCBP-204ENST00000447182 MXD3Q9BW11 206 aa20.88■□□□□ 0.93
SDCBP-204ENST00000447182 CCNL1Q9UK58 526 aaPredicted RBP20.88■□□□□ 0.93
SDCBP-204ENST00000447182 GREB1LQ9C091 1923 aaPredicted RBP20.88■□□□□ 0.93
SDCBP-204ENST00000447182 A0A0A6YYK5 440 aaPredicted RBP20.87■□□□□ 0.93
SDCBP-204ENST00000447182 USP17L10C9JJH3 530 aa20.87■□□□□ 0.93
SDCBP-204ENST00000447182 H0YGN5 161 aa20.87■□□□□ 0.93
SDCBP-204ENST00000447182 CCDC188H7C350 402 aa20.87■□□□□ 0.93
SDCBP-204ENST00000447182 PGRMC1O00264 195 aaKnown RBP20.87■□□□□ 0.93
SDCBP-204ENST00000447182 FLOT1O75955 427 aa20.87■□□□□ 0.93
SDCBP-204ENST00000447182 KRT18P05783 430 aaKnown RBP20.87■□□□□ 0.93
SDCBP-204ENST00000447182 RFC4P35249 363 aa20.87■□□□□ 0.93
SDCBP-204ENST00000447182 GTF2A1P52655 376 aaPredicted RBP20.87■□□□□ 0.93
SDCBP-204ENST00000447182 FAM98CQ17RN3 349 aaKnown RBP20.87■□□□□ 0.93
SDCBP-204ENST00000447182 KNOP1Q1ED39 458 aaKnown RBP20.87■□□□□ 0.93
SDCBP-204ENST00000447182 CEP85LQ5SZL2 805 aa20.87■□□□□ 0.93
SDCBP-204ENST00000447182 MAATS1Q7Z4T9 603 aa20.87■□□□□ 0.93
SDCBP-204ENST00000447182 ARFGAP2Q8N6H7 521 aa20.87■□□□□ 0.93
SDCBP-204ENST00000447182 TPCN2Q8NHX9 752 aa20.87■□□□□ 0.93
SDCBP-204ENST00000447182 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.87■□□□□ 0.93
SDCBP-204ENST00000447182 NFS1Q9Y697 457 aa20.87■□□□□ 0.93
SDCBP-204ENST00000447182 GOLGA6L10A6NI86 522 aa20.87■□□□□ 0.93
SDCBP-204ENST00000447182 PDXKO00764 312 aa20.87■□□□□ 0.93
SDCBP-204ENST00000447182 KIAA0754O94854 1291 aa20.87■□□□□ 0.93
SDCBP-204ENST00000447182 FSBPO95073 299 aa20.87■□□□□ 0.93
SDCBP-204ENST00000447182 GUCY2CP25092 1073 aa20.87■□□□□ 0.93
SDCBP-204ENST00000447182 HSD17B3P37058 310 aa20.87■□□□□ 0.93
SDCBP-204ENST00000447182 CNPY4Q8N129 248 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms