RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 SPTLC2O15270 562 aa19.39■□□□□ 0.69
LIME1-202ENST00000444951 GH1P01241 217 aa19.39■□□□□ 0.69
LIME1-202ENST00000444951 SLC39A14Q15043 492 aa19.39■□□□□ 0.69
LIME1-202ENST00000444951 CELF3Q5SZQ8 465 aaKnown RBP19.39■□□□□ 0.69
LIME1-202ENST00000444951 NCAPH2Q6IBW4 605 aa19.39■□□□□ 0.69
LIME1-202ENST00000444951 DTHD1Q6ZMT9 781 aa19.39■□□□□ 0.69
LIME1-202ENST00000444951 PCSK9Q8NBP7 692 aaKnown RBP19.39■□□□□ 0.69
LIME1-202ENST00000444951 LINC00301Q8NCQ3 95 aa19.39■□□□□ 0.69
LIME1-202ENST00000444951 VTI1AQ96AJ9 217 aa19.39■□□□□ 0.69
LIME1-202ENST00000444951 SPC25Q9HBM1 224 aa19.39■□□□□ 0.69
LIME1-202ENST00000444951 TBC1D22BQ9NU19 505 aa19.39■□□□□ 0.69
LIME1-202ENST00000444951 PCDHA12Q9UN75 941 aa19.39■□□□□ 0.69
LIME1-202ENST00000444951 TELO2Q9Y4R8 837 aa19.39■□□□□ 0.69
LIME1-202ENST00000444951 A0A0U1RQG5 324 aaPredicted RBP19.38■□□□□ 0.69
LIME1-202ENST00000444951 LAD1O00515 517 aa19.38■□□□□ 0.69
LIME1-202ENST00000444951 DHX15O43143 795 aaKnown RBP19.38■□□□□ 0.69
LIME1-202ENST00000444951 PSMD10O75832 226 aa19.38■□□□□ 0.69
LIME1-202ENST00000444951 YEATS4O95619 227 aa19.38■□□□□ 0.69
LIME1-202ENST00000444951 TIMP1P01033 207 aa19.38■□□□□ 0.69
LIME1-202ENST00000444951 IL17AQ16552 155 aa19.38■□□□□ 0.69
LIME1-202ENST00000444951 TMEM266Q2M3C6 531 aa19.38■□□□□ 0.69
LIME1-202ENST00000444951 CXCL17Q6UXB2 119 aa19.38■□□□□ 0.69
LIME1-202ENST00000444951 C16orf59Q7L2K0 433 aa19.38■□□□□ 0.69
LIME1-202ENST00000444951 TLK2Q86UE8 772 aa19.38■□□□□ 0.69
LIME1-202ENST00000444951 FAM126BQ8IXS8 530 aa19.38■□□□□ 0.69
LIME1-202ENST00000444951 GIMAP8Q8ND71 665 aaPredicted RBP19.38■□□□□ 0.69
LIME1-202ENST00000444951 LEO1Q8WVC0 666 aaPredicted RBP19.38■□□□□ 0.69
LIME1-202ENST00000444951 MYLIPQ8WY64 445 aa19.38■□□□□ 0.69
LIME1-202ENST00000444951 SPATA33Q96N06 139 aa19.38■□□□□ 0.69
LIME1-202ENST00000444951 RIT2Q99578 217 aa19.38■□□□□ 0.69
LIME1-202ENST00000444951 SENP7Q9BQF6 1050 aa19.38■□□□□ 0.69
LIME1-202ENST00000444951 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.38■□□□□ 0.692e-7■■■■□ 20.1
LIME1-202ENST00000444951 AP5M1Q9H0R1 490 aa19.38■□□□□ 0.69
LIME1-202ENST00000444951 UNC45AQ9H3U1 944 aa19.38■□□□□ 0.69
LIME1-202ENST00000444951 JPH1Q9HDC5 661 aaPredicted RBP19.38■□□□□ 0.69
LIME1-202ENST00000444951 SLC9A2Q9UBY0 812 aa19.38■□□□□ 0.69
LIME1-202ENST00000444951 GRIN2DO15399 1336 aa19.37■□□□□ 0.69
LIME1-202ENST00000444951 NFASCO94856 1347 aa19.37■□□□□ 0.69
LIME1-202ENST00000444951 NOP56O00567 594 aaKnown RBP19.37■□□□□ 0.69
LIME1-202ENST00000444951 NKRFO15226 690 aaKnown RBP eCLIP19.37■□□□□ 0.691e-7■■■□□ 16.1
LIME1-202ENST00000444951 ME1P48163 572 aa19.37■□□□□ 0.69
LIME1-202ENST00000444951 ARHGAP1Q07960 439 aa19.37■□□□□ 0.69
LIME1-202ENST00000444951 LAMC2Q13753 1193 aa19.37■□□□□ 0.69
LIME1-202ENST00000444951 CLIC6Q96NY7 704 aa19.37■□□□□ 0.69
LIME1-202ENST00000444951 PPP1R12CQ9BZL4 782 aa19.37■□□□□ 0.69
LIME1-202ENST00000444951 VAV3Q9UKW4 847 aa19.37■□□□□ 0.69
LIME1-202ENST00000444951 SAMM50Q9Y512 469 aa19.37■□□□□ 0.69
LIME1-202ENST00000444951 MROH7Q68CQ1 1323 aa19.36■□□□□ 0.69
LIME1-202ENST00000444951 POTEMA6NI47 508 aa19.36■□□□□ 0.69
LIME1-202ENST00000444951 CCNE2O96020 404 aa19.36■□□□□ 0.69
LIME1-202ENST00000444951 CD4P01730 458 aa19.36■□□□□ 0.69
LIME1-202ENST00000444951 PRPHP41219 470 aa19.36■□□□□ 0.69
LIME1-202ENST00000444951 GRIN1Q05586 938 aa19.36■□□□□ 0.69
LIME1-202ENST00000444951 MFSD5Q6N075 450 aa19.36■□□□□ 0.69
LIME1-202ENST00000444951 METTL7BQ6UX53 244 aa19.36■□□□□ 0.69
LIME1-202ENST00000444951 KCNG4Q8TDN1 519 aa19.36■□□□□ 0.69
LIME1-202ENST00000444951 AFG1LQ8WV93 481 aa19.36■□□□□ 0.69
LIME1-202ENST00000444951 SCAND2PQ9GZW5 306 aaPredicted RBP19.36■□□□□ 0.69
LIME1-202ENST00000444951 FBXO2Q9UK22 296 aaPredicted RBP19.36■□□□□ 0.69
LIME1-202ENST00000444951 RCOR1Q9UKL0 485 aa19.36■□□□□ 0.69
LIME1-202ENST00000444951 SPTBN5Q9NRC6 3674 aaKnown RBP19.36■□□□□ 0.69
LIME1-202ENST00000444951 CSF2RAP15509 400 aa19.35■□□□□ 0.69
LIME1-202ENST00000444951 ACTR2P61160 394 aa19.35■□□□□ 0.69
LIME1-202ENST00000444951 KRT76Q01546 638 aa19.35■□□□□ 0.69
LIME1-202ENST00000444951 FSCN1Q16658 493 aaKnown RBP19.35■□□□□ 0.69
LIME1-202ENST00000444951 HSDL1Q3SXM5 330 aa19.35■□□□□ 0.69
LIME1-202ENST00000444951 SPECC1Q5M775 1068 aa19.35■□□□□ 0.69
LIME1-202ENST00000444951 TMEM240Q5SV17 173 aa19.35■□□□□ 0.69
LIME1-202ENST00000444951 ARL6IP4Q66PJ3 421 aaKnown RBP19.35■□□□□ 0.69
LIME1-202ENST00000444951 MIER3Q7Z3K6 550 aa19.35■□□□□ 0.69
LIME1-202ENST00000444951 KRI1Q8N9T8 703 aaKnown RBP19.35■□□□□ 0.69
LIME1-202ENST00000444951 SLC43A3Q8NBI5 491 aa19.35■□□□□ 0.69
LIME1-202ENST00000444951 UMODL1Q5DID0 1318 aa19.34■□□□□ 0.69
LIME1-202ENST00000444951 TCHHQ07283 1943 aa19.34■□□□□ 0.69
LIME1-202ENST00000444951 PP2D1A8MPX8 630 aa19.34■□□□□ 0.69
LIME1-202ENST00000444951 EML1O00423 815 aa19.34■□□□□ 0.69
LIME1-202ENST00000444951 ACRP10323 421 aa19.34■□□□□ 0.69
LIME1-202ENST00000444951 CYP2C18P33260 490 aa19.34■□□□□ 0.69
LIME1-202ENST00000444951 PSMC6P62333 389 aa19.34■□□□□ 0.69
LIME1-202ENST00000444951 UTP14CQ5TAP6 766 aaKnown RBP19.34■□□□□ 0.69
LIME1-202ENST00000444951 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.34■□□□□ 0.69
LIME1-202ENST00000444951 CSRNP2Q9H175 543 aa19.34■□□□□ 0.69
LIME1-202ENST00000444951 DISC1Q9NRI5 854 aa19.34■□□□□ 0.69
LIME1-202ENST00000444951 LRWD1Q9UFC0 647 aa19.34■□□□□ 0.69
LIME1-202ENST00000444951 SRPRBQ9Y5M8 271 aaKnown RBP19.34■□□□□ 0.69
LIME1-202ENST00000444951 CHD9Q3L8U1 2897 aa19.34■□□□□ 0.69
LIME1-202ENST00000444951 PPP6R2O75170 966 aa19.33■□□□□ 0.68
LIME1-202ENST00000444951 CDC25AP30304 524 aa19.33■□□□□ 0.68
LIME1-202ENST00000444951 FXR2P51116 673 aaKnown RBP eCLIP19.33■□□□□ 0.68
LIME1-202ENST00000444951 SPIRE1Q08AE8 756 aa19.33■□□□□ 0.68
LIME1-202ENST00000444951 PPP2R5CQ13362 524 aa19.33■□□□□ 0.68
LIME1-202ENST00000444951 ZRSR1Q15695 479 aaKnown RBP19.33■□□□□ 0.68
LIME1-202ENST00000444951 ZNF746Q6NUN9 644 aaPredicted RBP19.33■□□□□ 0.68
LIME1-202ENST00000444951 GPR20Q99678 358 aa19.33■□□□□ 0.68
LIME1-202ENST00000444951 RAB34Q9BZG1 259 aa19.33■□□□□ 0.68
LIME1-202ENST00000444951 PCDHA7Q9UN72 937 aa19.33■□□□□ 0.68
LIME1-202ENST00000444951 GSTTP1A0A1W2PQM5 241 aa19.32■□□□□ 0.68
LIME1-202ENST00000444951 GRXCR1A8MXD5 290 aa19.32■□□□□ 0.68
LIME1-202ENST00000444951 WDR64B1ANS9 1081 aa19.32■□□□□ 0.68
LIME1-202ENST00000444951 BACH1O14867 736 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms