RNA–Protein interactions for RNA: ENST00000444457.5

PMPCB-204, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 2,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-204ENST00000444457 RAB34Q9BZG1 259 aa20.75■□□□□ 0.91
PMPCB-204ENST00000444457 TRIM6Q9C030 488 aaPredicted RBP20.75■□□□□ 0.91
PMPCB-204ENST00000444457 SEMA6BQ9H3T3 888 aa20.75■□□□□ 0.91
PMPCB-204ENST00000444457 HAUS2Q9NVX0 235 aa20.75■□□□□ 0.91
PMPCB-204ENST00000444457 PNMA6FA0A0J9YX94 578 aa20.75■□□□□ 0.91
PMPCB-204ENST00000444457 CLNS1AP54105 237 aaKnown RBP20.75■□□□□ 0.91
PMPCB-204ENST00000444457 LACTB2Q53H82 288 aaPredicted RBP20.75■□□□□ 0.91
PMPCB-204ENST00000444457 CENPPQ6IPU0 288 aa20.75■□□□□ 0.91
PMPCB-204ENST00000444457 ADGRF4Q8IZF3 695 aa20.75■□□□□ 0.91
PMPCB-204ENST00000444457 WHAMMQ8TF30 809 aa20.75■□□□□ 0.91
PMPCB-204ENST00000444457 PSMB7Q99436 277 aa20.75■□□□□ 0.91
PMPCB-204ENST00000444457 RIC8AQ9NPQ8 531 aa20.75■□□□□ 0.91
PMPCB-204ENST00000444457 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.75■□□□□ 0.91
PMPCB-204ENST00000444457 PVALEFA0A1B0GWK0 134 aa20.74■□□□□ 0.91
PMPCB-204ENST00000444457 HEXIM1O94992 359 aaKnown RBP20.74■□□□□ 0.91
PMPCB-204ENST00000444457 SHMT1P34896 483 aa20.74■□□□□ 0.91
PMPCB-204ENST00000444457 TNNI2P48788 182 aa20.74■□□□□ 0.91
PMPCB-204ENST00000444457 XRCC4Q13426 336 aa20.74■□□□□ 0.91
PMPCB-204ENST00000444457 PDIA5Q14554 519 aa20.74■□□□□ 0.91
PMPCB-204ENST00000444457 ERGIC2Q96RQ1 377 aa20.74■□□□□ 0.91
PMPCB-204ENST00000444457 TMBIM4Q9HC24 238 aa20.74■□□□□ 0.91
PMPCB-204ENST00000444457 EPB41L5Q9HCM4 733 aa20.74■□□□□ 0.91
PMPCB-204ENST00000444457 PPANQ9NQ55 473 aaKnown RBP20.74■□□□□ 0.91
PMPCB-204ENST00000444457 USP40Q9NVE5 1235 aa20.74■□□□□ 0.91
PMPCB-204ENST00000444457 RNF14Q9UBS8 474 aa20.74■□□□□ 0.91
PMPCB-204ENST00000444457 GMNCA6NCL1 334 aa20.74■□□□□ 0.91
PMPCB-204ENST00000444457 PPP1R11O60927 126 aaPredicted RBP20.74■□□□□ 0.91
PMPCB-204ENST00000444457 PLEKP08567 350 aaPredicted RBP20.74■□□□□ 0.91
PMPCB-204ENST00000444457 UBE2SQ16763 222 aa20.74■□□□□ 0.91
PMPCB-204ENST00000444457 C11orf91Q3C1V1 193 aa20.74■□□□□ 0.91
PMPCB-204ENST00000444457 TLR10Q9BXR5 811 aa20.74■□□□□ 0.91
PMPCB-204ENST00000444457 NKRFO15226 690 aaKnown RBP eCLIP20.73■□□□□ 0.91
PMPCB-204ENST00000444457 TRAPPC3O43617 180 aa20.73■□□□□ 0.91
PMPCB-204ENST00000444457 CLK2P49760 499 aaKnown RBP20.73■□□□□ 0.91
PMPCB-204ENST00000444457 GUCY2DQ02846 1103 aa20.73■□□□□ 0.91
PMPCB-204ENST00000444457 CFAP221Q4G0U5 840 aa20.73■□□□□ 0.91
PMPCB-204ENST00000444457 SNX29Q8TEQ0 813 aa20.73■□□□□ 0.91
PMPCB-204ENST00000444457 RAD54LQ92698 747 aa20.73■□□□□ 0.91
PMPCB-204ENST00000444457 SCLT1Q96NL6 688 aa20.73■□□□□ 0.91
PMPCB-204ENST00000444457 MXD3Q9BW11 206 aa20.73■□□□□ 0.91
PMPCB-204ENST00000444457 ZC3H12CQ9C0D7 883 aaKnown RBP20.73■□□□□ 0.91
PMPCB-204ENST00000444457 SLC12A6Q9UHW9 1150 aa20.73■□□□□ 0.91
PMPCB-204ENST00000444457 PLAGL2Q9UPG8 496 aa20.73■□□□□ 0.91
PMPCB-204ENST00000444457 ARFGEF1Q9Y6D6 1849 aa20.73■□□□□ 0.91
PMPCB-204ENST00000444457 C5orf60A6NFR6 353 aa20.73■□□□□ 0.91
PMPCB-204ENST00000444457 ZSCAN5CA6NGD5 496 aaPredicted RBP20.73■□□□□ 0.91
PMPCB-204ENST00000444457 CALRP27797 417 aaKnown RBP20.73■□□□□ 0.91
PMPCB-204ENST00000444457 TTBK2Q6IQ55 1244 aa20.73■□□□□ 0.91
PMPCB-204ENST00000444457 DYMQ7RTS9 669 aa20.73■□□□□ 0.91
PMPCB-204ENST00000444457 IFT81Q8WYA0 676 aa20.73■□□□□ 0.91
PMPCB-204ENST00000444457 IQCDQ96DY2 449 aa20.73■□□□□ 0.91
PMPCB-204ENST00000444457 PCMTD1Q96MG8 357 aaPredicted RBP20.73■□□□□ 0.91
PMPCB-204ENST00000444457 NUDT12Q9BQG2 462 aa20.73■□□□□ 0.91
PMPCB-204ENST00000444457 ARHGAP20Q9P2F6 1191 aa20.73■□□□□ 0.91
PMPCB-204ENST00000444457 BRWD3Q6RI45 1802 aa20.73■□□□□ 0.91
PMPCB-204ENST00000444457 ESYT3A0FGR9 886 aa20.72■□□□□ 0.91
PMPCB-204ENST00000444457 NCK2O43639 380 aa20.72■□□□□ 0.91
PMPCB-204ENST00000444457 MGRN1O60291 552 aa20.72■□□□□ 0.91
PMPCB-204ENST00000444457 IBSPP21815 317 aaPredicted RBP20.72■□□□□ 0.91
PMPCB-204ENST00000444457 HSPA9P38646 679 aaKnown RBP20.72■□□□□ 0.91
PMPCB-204ENST00000444457 SCTRP47872 440 aa20.72■□□□□ 0.91
PMPCB-204ENST00000444457 SCNN1DP51172 638 aa20.72■□□□□ 0.91
PMPCB-204ENST00000444457 KIF11P52732 1056 aa20.72■□□□□ 0.91
PMPCB-204ENST00000444457 IRX1P78414 480 aaPredicted RBP20.72■□□□□ 0.91
PMPCB-204ENST00000444457 KRT79Q5XKE5 535 aa20.72■□□□□ 0.91
PMPCB-204ENST00000444457 LRIG3Q6UXM1 1119 aa20.72■□□□□ 0.91
PMPCB-204ENST00000444457 P3H4Q92791 437 aa20.72■□□□□ 0.91
PMPCB-204ENST00000444457 TSKSQ9UJT2 592 aa20.72■□□□□ 0.91
PMPCB-204ENST00000444457 PLAAQ9Y263 795 aa20.72■□□□□ 0.91
PMPCB-204ENST00000444457 PJA2O43164 708 aa20.72■□□□□ 0.91
PMPCB-204ENST00000444457 SSBP05455 408 aaKnown RBP eCLIP20.72■□□□□ 0.91
PMPCB-204ENST00000444457 GUCY2FP51841 1108 aa20.72■□□□□ 0.91
PMPCB-204ENST00000444457 SLC8A3P57103 927 aa20.72■□□□□ 0.91
PMPCB-204ENST00000444457 TMEM119Q4V9L6 283 aa20.72■□□□□ 0.91
PMPCB-204ENST00000444457 GPATCH4Q5T3I0 446 aaKnown RBP20.72■□□□□ 0.91
PMPCB-204ENST00000444457 CASKIN2Q8WXE0 1202 aa20.72■□□□□ 0.91
PMPCB-204ENST00000444457 CUL5Q93034 780 aa20.72■□□□□ 0.91
PMPCB-204ENST00000444457 KCNG1Q9UIX4 513 aa20.72■□□□□ 0.91
PMPCB-204ENST00000444457 CDC42EP5Q6NZY7 148 aa20.71■□□□□ 0.91
PMPCB-204ENST00000444457 GUF1Q8N442 669 aaKnown RBP20.71■□□□□ 0.91
PMPCB-204ENST00000444457 PLCB1Q9NQ66 1216 aa20.71■□□□□ 0.91
PMPCB-204ENST00000444457 DNAJC8O75937 253 aaPredicted RBP20.71■□□□□ 0.91
PMPCB-204ENST00000444457 HPDP32754 393 aaPredicted RBP20.71■□□□□ 0.91
PMPCB-204ENST00000444457 SLC16A2P36021 539 aa20.71■□□□□ 0.91
PMPCB-204ENST00000444457 E2F5Q15329 346 aa20.71■□□□□ 0.91
PMPCB-204ENST00000444457 CDC37Q16543 378 aaPredicted RBP20.71■□□□□ 0.91
PMPCB-204ENST00000444457 NBPF9Q3BBW0 867 aa20.71■□□□□ 0.91
PMPCB-204ENST00000444457 KLHDC7AQ5VTJ3 777 aa20.71■□□□□ 0.91
PMPCB-204ENST00000444457 ARMC9Q7Z3E5 817 aa20.71■□□□□ 0.91
PMPCB-204ENST00000444457 KCNK18Q7Z418 384 aa20.71■□□□□ 0.91
PMPCB-204ENST00000444457 MAB21L3Q8N8X9 362 aa20.71■□□□□ 0.91
PMPCB-204ENST00000444457 MS4A14Q96JA4 679 aa20.71■□□□□ 0.91
PMPCB-204ENST00000444457 SEC16BQ96JE7 1060 aa20.71■□□□□ 0.91
PMPCB-204ENST00000444457 DDX25Q9UHL0 483 aaKnown RBP20.71■□□□□ 0.91
PMPCB-204ENST00000444457 GOLGA6L10A6NI86 522 aa20.7■□□□□ 0.9
PMPCB-204ENST00000444457 ZBTB5O15062 677 aa20.7■□□□□ 0.9
PMPCB-204ENST00000444457 HLA-DOAP06340 250 aa20.7■□□□□ 0.9
PMPCB-204ENST00000444457 BYSLQ13895 437 aaKnown RBP20.7■□□□□ 0.9
PMPCB-204ENST00000444457 QPCTQ16769 361 aa20.7■□□□□ 0.9
PMPCB-204ENST00000444457 DOK7Q18PE1 504 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms