RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 IFT122Q9HBG6 1241 aa5.55□□□□□ -1.52
SCN11A-202ENST00000444237 KIDINS220Q9ULH0 1771 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 ATP6V1C1P21283 382 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 TMOD1P28289 359 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 ECE1P42892 770 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 SERPINB10P48595 397 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 ARHGAP4P98171 946 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 KRT31Q15323 416 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 TTC38Q5R3I4 469 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 TRIM65Q6PJ69 517 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 DSCC1Q9BVC3 393 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 KLHL25Q9H0H3 589 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 NLRC4Q9NPP4 1024 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 CCPG1Q9ULG6 757 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 PRELID1Q9Y255 219 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 FAM83GA6ND36 823 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 FTCDO95954 541 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 MTF1Q14872 753 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 GSTA3Q16772 222 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 ZMYM1Q5SVZ6 1142 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 TERB1Q8NA31 727 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 STKLD1Q8NE28 680 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 DTX3LQ8TDB6 740 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 SMCR8Q8TEV9 937 aaPredicted RBP5.54□□□□□ -1.52
SCN11A-202ENST00000444237 AGAP11Q8TF27 550 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 STK32AQ8WU08 396 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 NMD3Q96D46 503 aaKnown RBP5.54□□□□□ -1.52
SCN11A-202ENST00000444237 RIOK1Q9BRS2 568 aaKnown RBP5.54□□□□□ -1.52
SCN11A-202ENST00000444237 TMBIM4Q9HC24 238 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 RIC8AQ9NPQ8 531 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 SEPT10Q9P0V9 454 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 SPHKAPQ2M3C7 1700 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 PITPNM2Q9BZ72 1349 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 SMIM31A0A1B0GVY4 71 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 ESYT3A0FGR9 886 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 PI4KAP2A4QPH2 592 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 BTBD11A6QL63 1104 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 CALB2P22676 271 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 HSPA13P48723 471 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 TUBA1BP68363 451 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 ITGB3BPQ13352 177 aaPredicted RBP5.54□□□□□ -1.52
SCN11A-202ENST00000444237 ZNF174Q15697 407 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 CNGA3Q16281 694 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 ARMC3Q5W041 872 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 KRT79Q5XKE5 535 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 TUBA1AQ71U36 451 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 TRAPPC11Q7Z392 1133 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 MB21D1Q8N884 522 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 PI4KAP1Q8N8J0 262 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 CNBD1Q8NA66 436 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 RPS6KC1Q96S38 1066 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 ZKSCAN3Q9BRR0 538 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 LSM14BQ9BX40 385 aaKnown RBP5.54□□□□□ -1.52
SCN11A-202ENST00000444237 FAM129AQ9BZQ8 928 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 ASCC2Q9H1I8 757 aaPredicted RBP5.54□□□□□ -1.52
SCN11A-202ENST00000444237 TRPC5Q9UL62 973 aaPredicted RBP5.54□□□□□ -1.52
SCN11A-202ENST00000444237 TMA7Q9Y2S6 64 aaKnown RBP5.54□□□□□ -1.52
SCN11A-202ENST00000444237 TMED5Q9Y3A6 229 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 ADCY9O60503 1353 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 POTEFA5A3E0 1075 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 BACH1O14867 736 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 SHOX2O60902 331 aaPredicted RBP5.54□□□□□ -1.52
SCN11A-202ENST00000444237 POTEIP0CG38 1075 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 MYBL1P10243 752 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 BRAFP15056 766 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 CA4P22748 312 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 EIF4A3P38919 411 aaKnown RBP5.54□□□□□ -1.52
SCN11A-202ENST00000444237 KRT76Q01546 638 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 PPP2R5BQ15173 497 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 USH1GQ495M9 461 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 CCDC14Q49A88 953 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 TEDDM1Q5T9Z0 273 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 TMC5Q6UXY8 1006 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 B3GNT6Q6ZMB0 384 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 USP37Q86T82 979 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 PPP2R3CQ969Q6 453 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 ERP27Q96DN0 273 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 ZFRQ96KR1 1074 aaKnown RBP5.54□□□□□ -1.52
SCN11A-202ENST00000444237 BLZF1Q9H2G9 400 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 BHMT2Q9H2M3 363 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 FAM96AQ9H5X1 160 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 STK32BQ9NY57 414 aa5.54□□□□□ -1.52
SCN11A-202ENST00000444237 FAM187AA6NFU0 413 aa5.53□□□□□ -1.52
SCN11A-202ENST00000444237 MINDY4BA8MYZ0 360 aa5.53□□□□□ -1.52
SCN11A-202ENST00000444237 RANBP6O60518 1105 aaKnown RBP5.53□□□□□ -1.52
SCN11A-202ENST00000444237 ECEL1O95672 775 aa5.53□□□□□ -1.52
SCN11A-202ENST00000444237 TTC4O95801 387 aa5.53□□□□□ -1.52
SCN11A-202ENST00000444237 SYF2O95926 243 aaKnown RBP5.53□□□□□ -1.52
SCN11A-202ENST00000444237 RPN1P04843 607 aaKnown RBP5.53□□□□□ -1.52
SCN11A-202ENST00000444237 ZCCHC18P0CG32 403 aa5.53□□□□□ -1.52
SCN11A-202ENST00000444237 KCNA2P16389 499 aa5.53□□□□□ -1.52
SCN11A-202ENST00000444237 PPIDQ08752 370 aaKnown RBP5.53□□□□□ -1.52
SCN11A-202ENST00000444237 XRCC4Q13426 336 aa5.53□□□□□ -1.52
SCN11A-202ENST00000444237 NFRKBQ6P4R8 1299 aa5.53□□□□□ -1.52
SCN11A-202ENST00000444237 EPM2AIP1Q7L775 607 aaPredicted RBP5.53□□□□□ -1.52
SCN11A-202ENST00000444237 OTUD6AQ7L8S5 288 aa5.53□□□□□ -1.52
SCN11A-202ENST00000444237 ESR2Q92731 530 aa5.53□□□□□ -1.52
SCN11A-202ENST00000444237 DHTKD1Q96HY7 919 aaPredicted RBP5.53□□□□□ -1.52
SCN11A-202ENST00000444237 CLIC6Q96NY7 704 aa5.53□□□□□ -1.52
SCN11A-202ENST00000444237 UNC13BO14795 1591 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms