RNA–Protein interactions for RNA: ENST00000440375.1

PDGFB-203, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-203ENST00000440375 MAFGO15525 162 aa13.62□□□□□ -0.23
PDGFB-203ENST00000440375 EFCAB14O75071 495 aa13.62□□□□□ -0.23
PDGFB-203ENST00000440375 CCNE2O96020 404 aa13.62□□□□□ -0.23
PDGFB-203ENST00000440375 FAM86B2P0C5J1 330 aa13.62□□□□□ -0.23
PDGFB-203ENST00000440375 GHRP10912 638 aa13.62□□□□□ -0.23
PDGFB-203ENST00000440375 IGBP1P78318 339 aa13.62□□□□□ -0.23
PDGFB-203ENST00000440375 MGAT3Q09327 533 aa13.62□□□□□ -0.23
PDGFB-203ENST00000440375 GRB10Q13322 594 aa13.62□□□□□ -0.23
PDGFB-203ENST00000440375 TOB2Q14106 344 aaPredicted RBP13.62□□□□□ -0.23
PDGFB-203ENST00000440375 NTRK3Q16288 839 aa13.62□□□□□ -0.23
PDGFB-203ENST00000440375 FAM26DQ5JW98 314 aa13.62□□□□□ -0.23
PDGFB-203ENST00000440375 TEX2Q8IWB9 1127 aa13.62□□□□□ -0.23
PDGFB-203ENST00000440375 RASGRP4Q8TDF6 673 aa13.62□□□□□ -0.23
PDGFB-203ENST00000440375 TRAPPC12Q8WVT3 735 aa13.62□□□□□ -0.23
PDGFB-203ENST00000440375 RAD9AQ99638 391 aa13.62□□□□□ -0.23
PDGFB-203ENST00000440375 ZMYND12Q9H0C1 365 aa13.62□□□□□ -0.23
PDGFB-203ENST00000440375 SMARCAD1Q9H4L7 1026 aa13.62□□□□□ -0.23
PDGFB-203ENST00000440375 TUBE1Q9UJT0 475 aa13.62□□□□□ -0.23
PDGFB-203ENST00000440375 IGLV3-22A0A075B6J6 115 aa13.61□□□□□ -0.23
PDGFB-203ENST00000440375 ESYT2A0FGR8 921 aa13.61□□□□□ -0.23
PDGFB-203ENST00000440375 PRPF3O43395 683 aaKnown RBP13.61□□□□□ -0.23
PDGFB-203ENST00000440375 AMHP03971 560 aa13.61□□□□□ -0.23
PDGFB-203ENST00000440375 INSRRP14616 1297 aa13.61□□□□□ -0.23
PDGFB-203ENST00000440375 PDIA3P30101 505 aaKnown RBP13.61□□□□□ -0.23
PDGFB-203ENST00000440375 CCT2P78371 535 aaKnown RBP13.61□□□□□ -0.23
PDGFB-203ENST00000440375 PLCB4Q15147 1175 aa13.61□□□□□ -0.23
PDGFB-203ENST00000440375 TJAP1Q5JTD0 557 aa13.61□□□□□ -0.23
PDGFB-203ENST00000440375 TAF2Q6P1X5 1199 aa13.61□□□□□ -0.23
PDGFB-203ENST00000440375 DNAJB3Q8WWF6 145 aa13.61□□□□□ -0.23
PDGFB-203ENST00000440375 SEPT8Q92599 483 aa13.61□□□□□ -0.23
PDGFB-203ENST00000440375 SDF4Q9BRK5 362 aa13.61□□□□□ -0.23
PDGFB-203ENST00000440375 LARP6Q9BRS8 491 aaKnown RBP13.61□□□□□ -0.23
PDGFB-203ENST00000440375 POU3F3P20264 500 aaPredicted RBP13.6□□□□□ -0.23
PDGFB-203ENST00000440375 PSMA5P28066 241 aa13.6□□□□□ -0.23
PDGFB-203ENST00000440375 EVCP57679 992 aa13.6□□□□□ -0.23
PDGFB-203ENST00000440375 HTRA4P83105 476 aaPredicted RBP13.6□□□□□ -0.23
PDGFB-203ENST00000440375 TFF2Q03403 129 aa13.6□□□□□ -0.23
PDGFB-203ENST00000440375 LPIN1Q14693 890 aa13.6□□□□□ -0.23
PDGFB-203ENST00000440375 NIPA1Q7RTP0 329 aa13.6□□□□□ -0.23
PDGFB-203ENST00000440375 RPAINQ86UA6 219 aa13.6□□□□□ -0.23
PDGFB-203ENST00000440375 PLA2G4DQ86XP0 818 aa13.6□□□□□ -0.23
PDGFB-203ENST00000440375 REXO1Q8N1G1 1221 aaKnown RBP13.6□□□□□ -0.23
PDGFB-203ENST00000440375 C17orf80Q9BSJ5 609 aa13.6□□□□□ -0.23
PDGFB-203ENST00000440375 SLC26A6Q9BXS9 759 aa13.6□□□□□ -0.23
PDGFB-203ENST00000440375 IFIH1Q9BYX4 1025 aaKnown RBP13.6□□□□□ -0.23
PDGFB-203ENST00000440375 UPF3BQ9BZI7 483 aaKnown RBP13.6□□□□□ -0.23
PDGFB-203ENST00000440375 FAM49AQ9H0Q0 323 aaPredicted RBP13.6□□□□□ -0.23
PDGFB-203ENST00000440375 GLT8D2Q9H1C3 349 aa13.6□□□□□ -0.23
PDGFB-203ENST00000440375 AZI2Q9H6S1 392 aa13.6□□□□□ -0.23
PDGFB-203ENST00000440375 ZSWIM6Q9HCJ5 1215 aa13.6□□□□□ -0.23
PDGFB-203ENST00000440375 VPS54Q9P1Q0 977 aa13.6□□□□□ -0.23
PDGFB-203ENST00000440375 TRPC6Q9Y210 931 aa13.6□□□□□ -0.23
PDGFB-203ENST00000440375 DHX15O43143 795 aaKnown RBP13.59□□□□□ -0.23
PDGFB-203ENST00000440375 GTPBP6O43824 516 aaPredicted RBP13.59□□□□□ -0.23
PDGFB-203ENST00000440375 ATG7O95352 703 aa13.59□□□□□ -0.23
PDGFB-203ENST00000440375 NEFLP07196 543 aa13.59□□□□□ -0.23
PDGFB-203ENST00000440375 CYP3A4P08684 503 aa13.59□□□□□ -0.23
PDGFB-203ENST00000440375 IFNAR1P17181 557 aa13.59□□□□□ -0.23
PDGFB-203ENST00000440375 ZNF76P36508 570 aa13.59□□□□□ -0.23
PDGFB-203ENST00000440375 ERVK-21P61565 698 aa13.59□□□□□ -0.23
PDGFB-203ENST00000440375 RUFY3Q7L099 469 aa13.59□□□□□ -0.23
PDGFB-203ENST00000440375 CCDC60Q8IWA6 550 aaPredicted RBP13.59□□□□□ -0.23
PDGFB-203ENST00000440375 SP7Q8TDD2 431 aaPredicted RBP13.59□□□□□ -0.23
PDGFB-203ENST00000440375 ATXN2LQ8WWM7 1075 aaKnown RBP13.59□□□□□ -0.23
PDGFB-203ENST00000440375 ASB2Q96Q27 587 aa13.59□□□□□ -0.23
PDGFB-203ENST00000440375 TGS1Q96RS0 853 aaKnown RBP13.59□□□□□ -0.23
PDGFB-203ENST00000440375 RNF26Q9BY78 433 aaPredicted RBP13.59□□□□□ -0.23
PDGFB-203ENST00000440375 SUGCTQ9HAC7 445 aa13.59□□□□□ -0.23
PDGFB-203ENST00000440375 C6orf50Q9HD87 102 aa13.59□□□□□ -0.23
PDGFB-203ENST00000440375 CDY2AQ9Y6F7 541 aa13.59□□□□□ -0.23
PDGFB-203ENST00000440375 IGKV6D-21A0A0A0MT36 114 aa13.58□□□□□ -0.24
PDGFB-203ENST00000440375 IPO5O00410 1097 aaKnown RBP13.58□□□□□ -0.24
PDGFB-203ENST00000440375 EDIL3O43854 480 aa13.58□□□□□ -0.24
PDGFB-203ENST00000440375 UPP2O95045 317 aa13.58□□□□□ -0.24
PDGFB-203ENST00000440375 STAT5BP51692 787 aa13.58□□□□□ -0.24
PDGFB-203ENST00000440375 MRPS6P82932 125 aaKnown RBP13.58□□□□□ -0.24
PDGFB-203ENST00000440375 TMEM62Q0P6H9 643 aa13.58□□□□□ -0.24
PDGFB-203ENST00000440375 SKIV2LQ15477 1246 aaKnown RBP13.58□□□□□ -0.24
PDGFB-203ENST00000440375 FBXO47Q5MNV8 452 aa13.58□□□□□ -0.24
PDGFB-203ENST00000440375 ABHD15Q6UXT9 468 aa13.58□□□□□ -0.24
PDGFB-203ENST00000440375 PLPPR4Q7Z2D5 763 aa13.58□□□□□ -0.24
PDGFB-203ENST00000440375 CCDC12Q8WUD4 166 aaPredicted RBP13.58□□□□□ -0.24
PDGFB-203ENST00000440375 LINC01599Q8WXQ3 324 aa13.58□□□□□ -0.24
PDGFB-203ENST00000440375 TOP1MTQ969P6 601 aa13.58□□□□□ -0.24
PDGFB-203ENST00000440375 LENG9Q96B70 501 aa13.58□□□□□ -0.24
PDGFB-203ENST00000440375 AGO3Q9H9G7 860 aaKnown RBP13.58□□□□□ -0.24
PDGFB-203ENST00000440375 INSL6Q9Y581 213 aa13.58□□□□□ -0.24
PDGFB-203ENST00000440375 COL4A6Q14031 1691 aa13.57□□□□□ -0.24
PDGFB-203ENST00000440375 POTEB3A0JP26 581 aa13.57□□□□□ -0.24
PDGFB-203ENST00000440375 RRN3P2A6NIE6 340 aa13.57□□□□□ -0.24
PDGFB-203ENST00000440375 BACH1O14867 736 aa13.57□□□□□ -0.24
PDGFB-203ENST00000440375 CENPBP07199 599 aaPredicted RBP13.57□□□□□ -0.24
PDGFB-203ENST00000440375 MRPS5P82675 430 aaKnown RBP13.57□□□□□ -0.24
PDGFB-203ENST00000440375 AKAP17AQ02040 695 aaKnown RBP13.57□□□□□ -0.24
PDGFB-203ENST00000440375 PRR16Q569H4 304 aa13.57□□□□□ -0.24
PDGFB-203ENST00000440375 POTEBQ6S5H4 581 aa13.57□□□□□ -0.24
PDGFB-203ENST00000440375 RSPH3Q86UC2 560 aa13.57□□□□□ -0.24
PDGFB-203ENST00000440375 APBB2Q92870 758 aa13.57□□□□□ -0.24
PDGFB-203ENST00000440375 AIFM3Q96NN9 605 aa13.57□□□□□ -0.24
PDGFB-203ENST00000440375 YME1L1Q96TA2 773 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms