RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 ZSWIM6Q9HCJ5 1215 aa23.16■■□□□ 1.3
NCKIPSD-206ENST00000439518 TUBE1Q9UJT0 475 aa23.16■■□□□ 1.3
NCKIPSD-206ENST00000439518 MICAL3Q7RTP6 2002 aa23.15■■□□□ 1.3
NCKIPSD-206ENST00000439518 FAM86B1E9PN63 330 aa23.15■■□□□ 1.3
NCKIPSD-206ENST00000439518 AMHP03971 560 aa23.15■■□□□ 1.3
NCKIPSD-206ENST00000439518 NEFLP07196 543 aa23.15■■□□□ 1.3
NCKIPSD-206ENST00000439518 CYP3A4P08684 503 aa23.15■■□□□ 1.3
NCKIPSD-206ENST00000439518 FAM86B2P0C5J1 330 aa23.15■■□□□ 1.3
NCKIPSD-206ENST00000439518 MCTP2Q6DN12 878 aa23.15■■□□□ 1.3
NCKIPSD-206ENST00000439518 RUFY3Q7L099 469 aa23.15■■□□□ 1.3
NCKIPSD-206ENST00000439518 CCDC12Q8WUD4 166 aaPredicted RBP23.15■■□□□ 1.3
NCKIPSD-206ENST00000439518 ATXN2LQ8WWM7 1075 aaKnown RBP23.15■■□□□ 1.3
NCKIPSD-206ENST00000439518 SPTBN5Q9NRC6 3674 aaKnown RBP23.14■■□□□ 1.3
NCKIPSD-206ENST00000439518 IGLV3-22A0A075B6J6 115 aa23.14■■□□□ 1.29
NCKIPSD-206ENST00000439518 RRN3P2A6NIE6 340 aa23.14■■□□□ 1.29
NCKIPSD-206ENST00000439518 ATG7O95352 703 aa23.14■■□□□ 1.29
NCKIPSD-206ENST00000439518 INSRRP14616 1297 aa23.14■■□□□ 1.29
NCKIPSD-206ENST00000439518 IFNAR1P17181 557 aa23.14■■□□□ 1.29
NCKIPSD-206ENST00000439518 ZNF76P36508 570 aa23.14■■□□□ 1.29
NCKIPSD-206ENST00000439518 TOB2Q14106 344 aaPredicted RBP23.14■■□□□ 1.29
NCKIPSD-206ENST00000439518 TJAP1Q5JTD0 557 aa23.14■■□□□ 1.29
NCKIPSD-206ENST00000439518 FAM117BQ6P1L5 589 aa23.14■■□□□ 1.29
NCKIPSD-206ENST00000439518 PLPPR4Q7Z2D5 763 aa23.14■■□□□ 1.29
NCKIPSD-206ENST00000439518 RNF26Q9BY78 433 aaPredicted RBP23.14■■□□□ 1.29
NCKIPSD-206ENST00000439518 AZI2Q9H6S1 392 aa23.14■■□□□ 1.29
NCKIPSD-206ENST00000439518 C6orf50Q9HD87 102 aa23.14■■□□□ 1.29
NCKIPSD-206ENST00000439518 THEGQ9P2T0 379 aa23.14■■□□□ 1.29
NCKIPSD-206ENST00000439518 INSL6Q9Y581 213 aa23.14■■□□□ 1.29
NCKIPSD-206ENST00000439518 IGKV6D-21A0A0A0MT36 114 aa23.13■■□□□ 1.29
NCKIPSD-206ENST00000439518 LINC01553A4QN01 128 aa23.13■■□□□ 1.29
NCKIPSD-206ENST00000439518 GTPBP6O43824 516 aaPredicted RBP23.13■■□□□ 1.29
NCKIPSD-206ENST00000439518 LPXNO60711 386 aa23.13■■□□□ 1.29
NCKIPSD-206ENST00000439518 CCNE2O96020 404 aa23.13■■□□□ 1.29
NCKIPSD-206ENST00000439518 ERVK-21P61565 698 aa23.13■■□□□ 1.29
NCKIPSD-206ENST00000439518 HTRA4P83105 476 aaPredicted RBP23.13■■□□□ 1.29
NCKIPSD-206ENST00000439518 MGAT3Q09327 533 aa23.13■■□□□ 1.29
NCKIPSD-206ENST00000439518 GRB10Q13322 594 aa23.13■■□□□ 1.29
NCKIPSD-206ENST00000439518 RSPH3Q86UC2 560 aa23.13■■□□□ 1.29
NCKIPSD-206ENST00000439518 PLA2G4DQ86XP0 818 aa23.13■■□□□ 1.29
NCKIPSD-206ENST00000439518 MYOCDQ8IZQ8 938 aa23.13■■□□□ 1.29
NCKIPSD-206ENST00000439518 REXO1Q8N1G1 1221 aaKnown RBP23.13■■□□□ 1.29
NCKIPSD-206ENST00000439518 SYMPKQ92797 1274 aaKnown RBP23.13■■□□□ 1.29
NCKIPSD-206ENST00000439518 APBB2Q92870 758 aa23.13■■□□□ 1.29
NCKIPSD-206ENST00000439518 IFIH1Q9BYX4 1025 aaKnown RBP23.13■■□□□ 1.29
NCKIPSD-206ENST00000439518 TM6SF1Q9BZW5 370 aa23.13■■□□□ 1.29
NCKIPSD-206ENST00000439518 NCOA5Q9HCD5 579 aaKnown RBP23.13■■□□□ 1.29
NCKIPSD-206ENST00000439518 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.12■■□□□ 1.29
NCKIPSD-206ENST00000439518 DHX15O43143 795 aaKnown RBP23.12■■□□□ 1.29
NCKIPSD-206ENST00000439518 GNA11P29992 359 aa23.12■■□□□ 1.29
NCKIPSD-206ENST00000439518 STAT5BP51692 787 aa23.12■■□□□ 1.29
NCKIPSD-206ENST00000439518 AKAP17AQ02040 695 aaKnown RBP23.12■■□□□ 1.29
NCKIPSD-206ENST00000439518 PLCB4Q15147 1175 aa23.12■■□□□ 1.29
NCKIPSD-206ENST00000439518 KRT40Q6A162 431 aa23.12■■□□□ 1.29
NCKIPSD-206ENST00000439518 MICALL1Q8N3F8 863 aa23.12■■□□□ 1.29
NCKIPSD-206ENST00000439518 SP7Q8TDD2 431 aaPredicted RBP23.12■■□□□ 1.29
NCKIPSD-206ENST00000439518 DNAJB3Q8WWF6 145 aa23.12■■□□□ 1.29
NCKIPSD-206ENST00000439518 TOP1MTQ969P6 601 aa23.12■■□□□ 1.29
NCKIPSD-206ENST00000439518 TGS1Q96RS0 853 aaKnown RBP23.12■■□□□ 1.29
NCKIPSD-206ENST00000439518 PPFIA3O75145 1194 aa23.11■■□□□ 1.29
NCKIPSD-206ENST00000439518 SLC26A2P50443 739 aa23.11■■□□□ 1.29
NCKIPSD-206ENST00000439518 IGBP1P78318 339 aa23.11■■□□□ 1.29
NCKIPSD-206ENST00000439518 CCT2P78371 535 aaKnown RBP23.11■■□□□ 1.29
NCKIPSD-206ENST00000439518 ABHD15Q6UXT9 468 aa23.11■■□□□ 1.29
NCKIPSD-206ENST00000439518 TNPO1Q92973 898 aaKnown RBP23.11■■□□□ 1.29
NCKIPSD-206ENST00000439518 ZBTB10Q96DT7 871 aa23.11■■□□□ 1.29
NCKIPSD-206ENST00000439518 ASB2Q96Q27 587 aa23.11■■□□□ 1.29
NCKIPSD-206ENST00000439518 SLC26A6Q9BXS9 759 aa23.11■■□□□ 1.29
NCKIPSD-206ENST00000439518 TRPC6Q9Y210 931 aa23.11■■□□□ 1.29
NCKIPSD-206ENST00000439518 CYP46A1Q9Y6A2 500 aa23.11■■□□□ 1.29
NCKIPSD-206ENST00000439518 IPO5O00410 1097 aaKnown RBP23.1■■□□□ 1.29
NCKIPSD-206ENST00000439518 GHRP10912 638 aa23.1■■□□□ 1.29
NCKIPSD-206ENST00000439518 LPIN1Q14693 890 aa23.1■■□□□ 1.29
NCKIPSD-206ENST00000439518 SUGCTQ9HAC7 445 aa23.1■■□□□ 1.29
NCKIPSD-206ENST00000439518 NCOR1O75376 2440 aa23.09■■□□□ 1.29
NCKIPSD-206ENST00000439518 POTEB3A0JP26 581 aa23.09■■□□□ 1.29
NCKIPSD-206ENST00000439518 RPLP2P05387 115 aaKnown RBP23.09■■□□□ 1.29
NCKIPSD-206ENST00000439518 CIITAP33076 1130 aa23.09■■□□□ 1.29
NCKIPSD-206ENST00000439518 MRPS5P82675 430 aaKnown RBP23.09■■□□□ 1.29
NCKIPSD-206ENST00000439518 POTEBQ6S5H4 581 aa23.09■■□□□ 1.29
NCKIPSD-206ENST00000439518 CCDC148Q8NFR7 591 aa23.09■■□□□ 1.29
NCKIPSD-206ENST00000439518 BICD2Q8TD16 824 aa23.09■■□□□ 1.29
NCKIPSD-206ENST00000439518 RASGRP4Q8TDF6 673 aa23.09■■□□□ 1.29
NCKIPSD-206ENST00000439518 TRAPPC12Q8WVT3 735 aa23.09■■□□□ 1.29
NCKIPSD-206ENST00000439518 TSPYL2Q9H2G4 693 aaPredicted RBP23.09■■□□□ 1.29
NCKIPSD-206ENST00000439518 VPS54Q9P1Q0 977 aa23.09■■□□□ 1.29
NCKIPSD-206ENST00000439518 PCDHA2Q9Y5H9 948 aa23.09■■□□□ 1.29
NCKIPSD-206ENST00000439518 CDY2AQ9Y6F7 541 aa23.09■■□□□ 1.29
NCKIPSD-206ENST00000439518 SIP14410 1827 aa23.08■■□□□ 1.29
NCKIPSD-206ENST00000439518 DDX39AO00148 427 aaKnown RBP23.08■■□□□ 1.29
NCKIPSD-206ENST00000439518 MRPS6P82932 125 aaKnown RBP23.08■■□□□ 1.29
NCKIPSD-206ENST00000439518 FBXO47Q5MNV8 452 aa23.08■■□□□ 1.29
NCKIPSD-206ENST00000439518 GDPD5Q8WTR4 605 aa23.08■■□□□ 1.29
NCKIPSD-206ENST00000439518 ZNF274Q96GC6 653 aaPredicted RBP23.08■■□□□ 1.29
NCKIPSD-206ENST00000439518 UPF3BQ9BZI7 483 aaKnown RBP23.08■■□□□ 1.29
NCKIPSD-206ENST00000439518 FAM49AQ9H0Q0 323 aaPredicted RBP23.08■■□□□ 1.29
NCKIPSD-206ENST00000439518 SH3GLB2Q9NR46 395 aa23.08■■□□□ 1.29
NCKIPSD-206ENST00000439518 TBC1D22BQ9NU19 505 aa23.08■■□□□ 1.29
NCKIPSD-206ENST00000439518 LMCD1Q9NZU5 365 aa23.08■■□□□ 1.29
NCKIPSD-206ENST00000439518 MTUS1Q9ULD2 1270 aa23.08■■□□□ 1.29
NCKIPSD-206ENST00000439518 BDP1A6H8Y1 2624 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms