RNA–Protein interactions for RNA: ENST00000439510.2

CDC42EP4-202, Transcript of CDC42 effector protein 4, humanhuman

TSL 2 BASIC

Gene CDC42EP4, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-202ENST00000439510 C10orf76Q5T2E6 689 aa16.74■□□□□ 0.27
CDC42EP4-202ENST00000439510 MYCBPAPQ8TBZ2 947 aa16.74■□□□□ 0.27
CDC42EP4-202ENST00000439510 ADAMTS1Q9UHI8 967 aa16.74■□□□□ 0.27
CDC42EP4-202ENST00000439510 CAPN7Q9Y6W3 813 aa16.74■□□□□ 0.27
CDC42EP4-202ENST00000439510 ARFGEF1Q9Y6D6 1849 aa16.74■□□□□ 0.27
CDC42EP4-202ENST00000439510 FAM107AO95990 144 aa16.74■□□□□ 0.27
CDC42EP4-202ENST00000439510 SERPINB2P05120 415 aa16.74■□□□□ 0.27
CDC42EP4-202ENST00000439510 PRR5LQ6MZQ0 368 aa16.74■□□□□ 0.27
CDC42EP4-202ENST00000439510 NLRP14Q86W24 1093 aa16.74■□□□□ 0.27
CDC42EP4-202ENST00000439510 SCFD2Q8WU76 684 aa16.74■□□□□ 0.27
CDC42EP4-202ENST00000439510 CCT8L2Q96SF2 557 aa16.74■□□□□ 0.27
CDC42EP4-202ENST00000439510 UBA5Q9GZZ9 404 aa16.74■□□□□ 0.27
CDC42EP4-202ENST00000439510 ERVK-9P63128 1117 aa16.73■□□□□ 0.27
CDC42EP4-202ENST00000439510 ASIC2Q16515 512 aa16.73■□□□□ 0.27
CDC42EP4-202ENST00000439510 FAM133AQ8N9E0 248 aa16.73■□□□□ 0.27
CDC42EP4-202ENST00000439510 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.73■□□□□ 0.27
CDC42EP4-202ENST00000439510 FGFBP2Q9BYJ0 223 aa16.73■□□□□ 0.27
CDC42EP4-202ENST00000439510 H0YGN5 161 aa16.73■□□□□ 0.27
CDC42EP4-202ENST00000439510 PDHBP11177 359 aa16.73■□□□□ 0.27
CDC42EP4-202ENST00000439510 USP11P51784 963 aa16.73■□□□□ 0.27
CDC42EP4-202ENST00000439510 CEP85LQ5SZL2 805 aa16.73■□□□□ 0.27
CDC42EP4-202ENST00000439510 ACTRT1Q8TDG2 376 aa16.73■□□□□ 0.27
CDC42EP4-202ENST00000439510 TAF4BQ92750 862 aa16.73■□□□□ 0.27
CDC42EP4-202ENST00000439510 PBKQ96KB5 322 aa16.73■□□□□ 0.27
CDC42EP4-202ENST00000439510 KCTD10Q9H3F6 313 aa16.73■□□□□ 0.27
CDC42EP4-202ENST00000439510 NFS1Q9Y697 457 aa16.73■□□□□ 0.27
CDC42EP4-202ENST00000439510 FOCADQ5VW36 1801 aa16.73■□□□□ 0.27
CDC42EP4-202ENST00000439510 BAG6P46379 1132 aa16.72■□□□□ 0.27
CDC42EP4-202ENST00000439510 RPS6KA1Q15418 735 aa16.72■□□□□ 0.27
CDC42EP4-202ENST00000439510 HAS1Q92839 578 aa16.72■□□□□ 0.27
CDC42EP4-202ENST00000439510 COA7Q96BR5 231 aa16.72■□□□□ 0.27
CDC42EP4-202ENST00000439510 CALR3Q96L12 384 aaKnown RBP16.72■□□□□ 0.27
CDC42EP4-202ENST00000439510 NCAPGQ9BPX3 1015 aa16.72■□□□□ 0.27
CDC42EP4-202ENST00000439510 POLD4Q9HCU8 107 aa16.72■□□□□ 0.27
CDC42EP4-202ENST00000439510 KIF4AO95239 1232 aa16.72■□□□□ 0.27
CDC42EP4-202ENST00000439510 ZBTB48P10074 688 aaPredicted RBP16.72■□□□□ 0.27
CDC42EP4-202ENST00000439510 MAATS1Q7Z4T9 603 aa16.72■□□□□ 0.27
CDC42EP4-202ENST00000439510 ARFGAP2Q8N6H7 521 aa16.72■□□□□ 0.27
CDC42EP4-202ENST00000439510 LRRC57Q8N9N7 239 aa16.72■□□□□ 0.27
CDC42EP4-202ENST00000439510 CABS1Q96KC9 395 aa16.72■□□□□ 0.27
CDC42EP4-202ENST00000439510 PLIN4Q96Q06 1357 aa16.72■□□□□ 0.27
CDC42EP4-202ENST00000439510 ATP8B3O60423 1300 aa16.72■□□□□ 0.27
CDC42EP4-202ENST00000439510 KDM3AQ9Y4C1 1321 aa16.72■□□□□ 0.27
CDC42EP4-202ENST00000439510 GOLGA6L10A6NI86 522 aa16.71■□□□□ 0.27
CDC42EP4-202ENST00000439510 HSD17B3P37058 310 aa16.71■□□□□ 0.27
CDC42EP4-202ENST00000439510 RNASE9P60153 205 aaKnown RBP16.71■□□□□ 0.27
CDC42EP4-202ENST00000439510 ARID5AQ03989 594 aa16.71■□□□□ 0.27
CDC42EP4-202ENST00000439510 SLC15A2Q16348 729 aa16.71■□□□□ 0.27
CDC42EP4-202ENST00000439510 DPY19L2P1Q6NXN4 242 aa16.71■□□□□ 0.27
CDC42EP4-202ENST00000439510 PPP1R18Q6NYC8 613 aa16.71■□□□□ 0.27
CDC42EP4-202ENST00000439510 KLHL7Q8IXQ5 586 aa16.71■□□□□ 0.27
CDC42EP4-202ENST00000439510 C3orf20Q8ND61 904 aa16.71■□□□□ 0.27
CDC42EP4-202ENST00000439510 NT5C3AQ9H0P0 336 aa16.71■□□□□ 0.27
CDC42EP4-202ENST00000439510 BMP2KQ9NSY1 1161 aaPredicted RBP16.71■□□□□ 0.27
CDC42EP4-202ENST00000439510 KCNK3O14649 394 aa16.71■□□□□ 0.27
CDC42EP4-202ENST00000439510 CLK2P49760 499 aaKnown RBP16.71■□□□□ 0.27
CDC42EP4-202ENST00000439510 SEC24CP53992 1094 aa16.71■□□□□ 0.27
CDC42EP4-202ENST00000439510 HDLBPQ00341 1268 aaKnown RBP16.71■□□□□ 0.27
CDC42EP4-202ENST00000439510 UAP1Q16222 522 aaPredicted RBP16.71■□□□□ 0.27
CDC42EP4-202ENST00000439510 ASPRV1Q53RT3 343 aa16.71■□□□□ 0.27
CDC42EP4-202ENST00000439510 C6orf89Q6UWU4 347 aa16.71■□□□□ 0.27
CDC42EP4-202ENST00000439510 IRF2BP2Q7Z5L9 587 aa16.71■□□□□ 0.27
CDC42EP4-202ENST00000439510 CCDC65Q8IXS2 484 aa16.71■□□□□ 0.27
CDC42EP4-202ENST00000439510 SCFD1Q8WVM8 642 aa16.71■□□□□ 0.27
CDC42EP4-202ENST00000439510 LEMD3Q9Y2U8 911 aa16.71■□□□□ 0.27
CDC42EP4-202ENST00000439510 GPR75-ASB3A0A0A6YYF3 556 aa16.71■□□□□ 0.26
CDC42EP4-202ENST00000439510 POLRMTO00411 1230 aaKnown RBP16.71■□□□□ 0.26
CDC42EP4-202ENST00000439510 BTDP43251 543 aa16.71■□□□□ 0.26
CDC42EP4-202ENST00000439510 PLCB4Q15147 1175 aa16.71■□□□□ 0.26
CDC42EP4-202ENST00000439510 IFI16Q16666 785 aaKnown RBP16.71■□□□□ 0.26
CDC42EP4-202ENST00000439510 EDRF1Q3B7T1 1238 aa16.71■□□□□ 0.26
CDC42EP4-202ENST00000439510 PPP4R3CPQ6ZMV5 832 aa16.71■□□□□ 0.26
CDC42EP4-202ENST00000439510 LRRC45Q96CN5 670 aa16.71■□□□□ 0.26
CDC42EP4-202ENST00000439510 DDX25Q9UHL0 483 aaKnown RBP16.71■□□□□ 0.26
CDC42EP4-202ENST00000439510 GCOM1H8Y6P7 765 aaPredicted RBP16.7■□□□□ 0.26
CDC42EP4-202ENST00000439510 MYO1FO00160 1098 aa16.7■□□□□ 0.26
CDC42EP4-202ENST00000439510 MYZAPP0CAP1 466 aa16.7■□□□□ 0.26
CDC42EP4-202ENST00000439510 SNHG28P0DPA3 235 aa16.7■□□□□ 0.26
CDC42EP4-202ENST00000439510 PTK2Q05397 1052 aa16.7■□□□□ 0.26
CDC42EP4-202ENST00000439510 SLC12A6Q9UHW9 1150 aa16.7■□□□□ 0.26
CDC42EP4-202ENST00000439510 BZW2Q9Y6E2 419 aaKnown RBP16.7■□□□□ 0.26
CDC42EP4-202ENST00000439510 RGPD3A6NKT7 1758 aaPredicted RBP16.7■□□□□ 0.26
CDC42EP4-202ENST00000439510 RGPD4Q7Z3J3 1758 aa16.7■□□□□ 0.26
CDC42EP4-202ENST00000439510 FRMPD2Q68DX3 1309 aaPredicted RBP16.7■□□□□ 0.26
CDC42EP4-202ENST00000439510 MMP10P09238 476 aa16.7■□□□□ 0.26
CDC42EP4-202ENST00000439510 TNNI2P48788 182 aa16.7■□□□□ 0.26
CDC42EP4-202ENST00000439510 MNAT1P51948 309 aa16.7■□□□□ 0.26
CDC42EP4-202ENST00000439510 KCNH2Q12809 1159 aa16.7■□□□□ 0.26
CDC42EP4-202ENST00000439510 DRP2Q13474 957 aa16.7■□□□□ 0.26
CDC42EP4-202ENST00000439510 BIRC3Q13489 604 aa16.7■□□□□ 0.26
CDC42EP4-202ENST00000439510 HLTFQ14527 1009 aaKnown RBP eCLIP16.7■□□□□ 0.26
CDC42EP4-202ENST00000439510 CCDC91Q7Z6B0 441 aa16.7■□□□□ 0.26
CDC42EP4-202ENST00000439510 NELFCDQ8IXH7 590 aa16.7■□□□□ 0.26
CDC42EP4-202ENST00000439510 VCPKMTQ9H867 229 aa16.7■□□□□ 0.26
CDC42EP4-202ENST00000439510 KANSL2Q9H9L4 492 aa16.7■□□□□ 0.26
CDC42EP4-202ENST00000439510 TBC1D7Q9P0N9 293 aa16.7■□□□□ 0.26
CDC42EP4-202ENST00000439510 FRMD3A2A2Y4 597 aa16.69■□□□□ 0.26
CDC42EP4-202ENST00000439510 ACTN3Q08043 901 aaPredicted RBP16.69■□□□□ 0.26
CDC42EP4-202ENST00000439510 ZNF571Q7Z3V5 609 aaPredicted RBP16.69■□□□□ 0.26
CDC42EP4-202ENST00000439510 TEX11Q8IYF3 940 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms