RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 SMYD3Q9H7B4 428 aa12.36□□□□□ -0.43
PTCH1-209ENST00000437951 ZNF839A8K0R7 811 aa12.36□□□□□ -0.43
PTCH1-209ENST00000437951 ZBTB7BO15156 539 aaPredicted RBP12.36□□□□□ -0.43
PTCH1-209ENST00000437951 DEPDC1Q5TB30 811 aa12.36□□□□□ -0.43
PTCH1-209ENST00000437951 ADAT2Q7Z6V5 191 aaKnown RBP12.36□□□□□ -0.43
PTCH1-209ENST00000437951 BLIDQ8IZY5 108 aa12.36□□□□□ -0.43
PTCH1-209ENST00000437951 MCUQ8NE86 351 aa12.36□□□□□ -0.43
PTCH1-209ENST00000437951 FOXP1Q9H334 677 aaPredicted RBP12.36□□□□□ -0.43
PTCH1-209ENST00000437951 GPCPD1Q9NPB8 672 aa12.36□□□□□ -0.43
PTCH1-209ENST00000437951 MED23Q9ULK4 1368 aa12.36□□□□□ -0.43
PTCH1-209ENST00000437951 KRT14P02533 472 aa12.36□□□□□ -0.43
PTCH1-209ENST00000437951 SARM1Q6SZW1 724 aa12.36□□□□□ -0.43
PTCH1-209ENST00000437951 KCTD6Q8NC69 237 aa12.36□□□□□ -0.43
PTCH1-209ENST00000437951 NR1H4Q96RI1 486 aaPredicted RBP12.36□□□□□ -0.43
PTCH1-209ENST00000437951 DDAH1O94760 285 aa12.36□□□□□ -0.43
PTCH1-209ENST00000437951 TCIRG1Q13488 830 aa12.36□□□□□ -0.43
PTCH1-209ENST00000437951 ANGPT1Q15389 498 aa12.36□□□□□ -0.43
PTCH1-209ENST00000437951 PPP6R3Q5H9R7 873 aaPredicted RBP12.36□□□□□ -0.43
PTCH1-209ENST00000437951 USHBP1Q8N6Y0 703 aa12.36□□□□□ -0.43
PTCH1-209ENST00000437951 FAM161BQ96MY7 647 aa12.36□□□□□ -0.43
PTCH1-209ENST00000437951 PEG3Q9GZU2 1588 aa12.35□□□□□ -0.43
PTCH1-209ENST00000437951 SYCP2Q9BX26 1530 aa12.35□□□□□ -0.43
PTCH1-209ENST00000437951 NPC1L1Q9UHC9 1359 aa12.35□□□□□ -0.43
PTCH1-209ENST00000437951 PSMA4P25789 261 aaKnown RBP12.35□□□□□ -0.43
PTCH1-209ENST00000437951 ARL4AP40617 200 aa12.35□□□□□ -0.43
PTCH1-209ENST00000437951 NDUFA8P51970 172 aa12.35□□□□□ -0.43
PTCH1-209ENST00000437951 NR5A1Q13285 461 aa12.35□□□□□ -0.43
PTCH1-209ENST00000437951 TNIP2Q8NFZ5 429 aa12.35□□□□□ -0.43
PTCH1-209ENST00000437951 TMEM245Q9H330 911 aa12.35□□□□□ -0.43
PTCH1-209ENST00000437951 K7ENM7 598 aa12.35□□□□□ -0.43
PTCH1-209ENST00000437951 ENC1O14682 589 aa12.35□□□□□ -0.43
PTCH1-209ENST00000437951 RHOBTB1O94844 696 aa12.35□□□□□ -0.43
PTCH1-209ENST00000437951 ABCE1P61221 599 aaKnown RBP12.35□□□□□ -0.43
PTCH1-209ENST00000437951 TRIM16LQ309B1 348 aa12.35□□□□□ -0.43
PTCH1-209ENST00000437951 NCOA5Q9HCD5 579 aaKnown RBP12.35□□□□□ -0.43
PTCH1-209ENST00000437951 TFCP2L1Q9NZI6 479 aa12.35□□□□□ -0.43
PTCH1-209ENST00000437951 ARPP21Q9UBL0 812 aaPredicted RBP12.35□□□□□ -0.43
PTCH1-209ENST00000437951 SLC12A6Q9UHW9 1150 aa12.35□□□□□ -0.43
PTCH1-209ENST00000437951 PA2G4Q9UQ80 394 aaKnown RBP12.35□□□□□ -0.43
PTCH1-209ENST00000437951 PIK3R2O00459 728 aa12.35□□□□□ -0.43
PTCH1-209ENST00000437951 XPOTO43592 962 aaKnown RBP12.35□□□□□ -0.43
PTCH1-209ENST00000437951 VAMP4O75379 141 aa12.35□□□□□ -0.43
PTCH1-209ENST00000437951 KRT1P04264 644 aa12.35□□□□□ -0.43
PTCH1-209ENST00000437951 ARFIP2P53365 341 aa12.35□□□□□ -0.43
PTCH1-209ENST00000437951 CAPRIN1Q14444 709 aaKnown RBP12.35□□□□□ -0.43
PTCH1-209ENST00000437951 KIF22Q14807 665 aa12.35□□□□□ -0.43
PTCH1-209ENST00000437951 DCLK2Q8N568 766 aa12.35□□□□□ -0.43
PTCH1-209ENST00000437951 C3orf20Q8ND61 904 aa12.35□□□□□ -0.43
PTCH1-209ENST00000437951 BPIFA3Q9BQP9 254 aa12.35□□□□□ -0.43
PTCH1-209ENST00000437951 KLHL31Q9H511 634 aa12.35□□□□□ -0.43
PTCH1-209ENST00000437951 RTCBQ9Y3I0 505 aaKnown RBP12.35□□□□□ -0.43
PTCH1-209ENST00000437951 ALCAMQ13740 583 aa12.35□□□□□ -0.43
PTCH1-209ENST00000437951 CCDC85BQ15834 202 aaPredicted RBP12.35□□□□□ -0.43
PTCH1-209ENST00000437951 FAM167BQ9BTA0 163 aa12.35□□□□□ -0.43
PTCH1-209ENST00000437951 SNX25Q9H3E2 840 aa12.35□□□□□ -0.43
PTCH1-209ENST00000437951 SMCO2A6NFE2 343 aa12.35□□□□□ -0.43
PTCH1-209ENST00000437951 RSPH10B2B2RC85 870 aa12.35□□□□□ -0.43
PTCH1-209ENST00000437951 RSPH10BP0C881 870 aa12.35□□□□□ -0.43
PTCH1-209ENST00000437951 HSPA2P54652 639 aa12.35□□□□□ -0.43
PTCH1-209ENST00000437951 ARHGEF6Q15052 776 aa12.35□□□□□ -0.43
PTCH1-209ENST00000437951 WWP1Q9H0M0 922 aa12.35□□□□□ -0.43
PTCH1-209ENST00000437951 RAD21L1Q9H4I0 556 aa12.35□□□□□ -0.43
PTCH1-209ENST00000437951 NFU1Q9UMS0 254 aa12.35□□□□□ -0.43
PTCH1-209ENST00000437951 CDC27P30260 824 aa12.35□□□□□ -0.43
PTCH1-209ENST00000437951 ME3Q16798 604 aa12.35□□□□□ -0.43
PTCH1-209ENST00000437951 TRIM71Q2Q1W2 868 aaKnown RBP12.35□□□□□ -0.43
PTCH1-209ENST00000437951 C16orf89Q6UX73 402 aa12.35□□□□□ -0.43
PTCH1-209ENST00000437951 PHACTR3Q96KR7 559 aa12.35□□□□□ -0.43
PTCH1-209ENST00000437951 PCDHA7Q9UN72 937 aa12.35□□□□□ -0.43
PTCH1-209ENST00000437951 NLRP11P59045 1033 aaKnown RBP12.34□□□□□ -0.43
PTCH1-209ENST00000437951 PPM1KQ8N3J5 372 aa12.34□□□□□ -0.43
PTCH1-209ENST00000437951 EPS8L2Q9H6S3 715 aa12.34□□□□□ -0.43
PTCH1-209ENST00000437951 PCDHA12Q9UN75 941 aa12.34□□□□□ -0.43
PTCH1-209ENST00000437951 PSMA3P25788 255 aa12.34□□□□□ -0.43
PTCH1-209ENST00000437951 PDCLQ13371 301 aa12.34□□□□□ -0.43
PTCH1-209ENST00000437951 C8orf37Q96NL8 207 aa12.34□□□□□ -0.43
PTCH1-209ENST00000437951 ADPGKQ9BRR6 497 aa12.34□□□□□ -0.43
PTCH1-209ENST00000437951 ATP8B3O60423 1300 aa12.34□□□□□ -0.43
PTCH1-209ENST00000437951 FAM95CA0A1B0GW59 222 aa12.34□□□□□ -0.43
PTCH1-209ENST00000437951 E7EWF7 191 aa12.34□□□□□ -0.43
PTCH1-209ENST00000437951 MAP3K13O43283 966 aa12.34□□□□□ -0.43
PTCH1-209ENST00000437951 ZSWIM6Q9HCJ5 1215 aa12.34□□□□□ -0.43
PTCH1-209ENST00000437951 LZTS1Q9Y250 596 aa12.34□□□□□ -0.43
PTCH1-209ENST00000437951 DUOX2Q9NRD8 1548 aa12.34□□□□□ -0.43
PTCH1-209ENST00000437951 SERPINB3P29508 390 aa12.34□□□□□ -0.43
PTCH1-209ENST00000437951 EIF6P56537 245 aaKnown RBP12.34□□□□□ -0.43
PTCH1-209ENST00000437951 OLFML2BQ68BL8 750 aa12.34□□□□□ -0.43
PTCH1-209ENST00000437951 TMEM154Q6P9G4 183 aa12.34□□□□□ -0.43
PTCH1-209ENST00000437951 CYP26B1Q9NR63 512 aa12.34□□□□□ -0.43
PTCH1-209ENST00000437951 MTMR6Q9Y217 621 aa12.34□□□□□ -0.43
PTCH1-209ENST00000437951 SLC9A1P19634 815 aa12.34□□□□□ -0.43
PTCH1-209ENST00000437951 TJAP1Q5JTD0 557 aa12.34□□□□□ -0.43
PTCH1-209ENST00000437951 P2RX5Q93086 422 aa12.34□□□□□ -0.43
PTCH1-209ENST00000437951 RBM41Q96IZ5 413 aaKnown RBP12.34□□□□□ -0.43
PTCH1-209ENST00000437951 KDM4CQ9H3R0 1056 aa12.34□□□□□ -0.43
PTCH1-209ENST00000437951 NSMCE4AQ9NXX6 385 aa12.34□□□□□ -0.43
PTCH1-209ENST00000437951 GJA3Q9Y6H8 435 aa12.34□□□□□ -0.43
PTCH1-209ENST00000437951 ZBED4O75132 1171 aa12.34□□□□□ -0.43
PTCH1-209ENST00000437951 HDLBPQ00341 1268 aaKnown RBP12.34□□□□□ -0.43
PTCH1-209ENST00000437951 RAPGEF5Q92565 580 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms