RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 SF3B2Q13435 895 aaKnown RBP17.13■□□□□ 0.33
SCARF1-203ENST00000434376 CASP8Q14790 479 aa17.13■□□□□ 0.33
SCARF1-203ENST00000434376 BRD3Q15059 726 aa17.13■□□□□ 0.33
SCARF1-203ENST00000434376 ARSHQ5FYA8 562 aa17.13■□□□□ 0.33
SCARF1-203ENST00000434376 CENPPQ6IPU0 288 aa17.13■□□□□ 0.33
SCARF1-203ENST00000434376 CEP112Q8N8E3 955 aa17.13■□□□□ 0.33
SCARF1-203ENST00000434376 EIF2AK1Q9BQI3 630 aaKnown RBP17.13■□□□□ 0.33
SCARF1-203ENST00000434376 ANKZF1Q9H8Y5 726 aa17.13■□□□□ 0.33
SCARF1-203ENST00000434376 CCPG1Q9ULG6 757 aa17.13■□□□□ 0.33
SCARF1-203ENST00000434376 RABGAP1Q9Y3P9 1069 aa17.13■□□□□ 0.33
SCARF1-203ENST00000434376 KRT83P78385 493 aa17.13■□□□□ 0.33
SCARF1-203ENST00000434376 MYH10P35580 1976 aa17.13■□□□□ 0.33
SCARF1-203ENST00000434376 NFIBO00712 420 aa17.13■□□□□ 0.33
SCARF1-203ENST00000434376 CETN3O15182 167 aa17.13■□□□□ 0.33
SCARF1-203ENST00000434376 TTC31Q49AM3 519 aaPredicted RBP17.13■□□□□ 0.33
SCARF1-203ENST00000434376 MUM1L1Q5H9M0 696 aa17.13■□□□□ 0.33
SCARF1-203ENST00000434376 TTC19Q6DKK2 380 aaPredicted RBP17.13■□□□□ 0.33
SCARF1-203ENST00000434376 SALL4Q9UJQ4 1053 aa17.13■□□□□ 0.33
SCARF1-203ENST00000434376 MYH1P12882 1939 aa17.12■□□□□ 0.33
SCARF1-203ENST00000434376 TESPA1A2RU30 521 aaPredicted RBP17.12■□□□□ 0.33
SCARF1-203ENST00000434376 GOLGA8IPA6NC78 632 aa17.12■□□□□ 0.33
SCARF1-203ENST00000434376 GOLGA8JA6NMD2 632 aa17.12■□□□□ 0.33
SCARF1-203ENST00000434376 PDE2AO00408 941 aaPredicted RBP17.12■□□□□ 0.33
SCARF1-203ENST00000434376 FLOT1O75955 427 aa17.12■□□□□ 0.33
SCARF1-203ENST00000434376 SOX10P56693 466 aa17.12■□□□□ 0.33
SCARF1-203ENST00000434376 KCNH2Q12809 1159 aa17.12■□□□□ 0.33
SCARF1-203ENST00000434376 CCDC51Q96ER9 411 aa17.12■□□□□ 0.33
SCARF1-203ENST00000434376 CUEDC2Q9H467 287 aa17.12■□□□□ 0.33
SCARF1-203ENST00000434376 PCDHA13Q9Y5I0 950 aa17.12■□□□□ 0.33
SCARF1-203ENST00000434376 ESYT2A0FGR8 921 aa17.12■□□□□ 0.33
SCARF1-203ENST00000434376 EHHADHQ08426 723 aa17.12■□□□□ 0.33
SCARF1-203ENST00000434376 KLHL30Q0D2K2 578 aa17.12■□□□□ 0.33
SCARF1-203ENST00000434376 TRIM14Q14142 442 aa17.12■□□□□ 0.33
SCARF1-203ENST00000434376 GUF1Q8N442 669 aaKnown RBP17.12■□□□□ 0.33
SCARF1-203ENST00000434376 ERMNQ8TAM6 284 aa17.12■□□□□ 0.33
SCARF1-203ENST00000434376 HDAC7Q8WUI4 952 aa17.12■□□□□ 0.33
SCARF1-203ENST00000434376 HDAC9Q9UKV0 1011 aa17.12■□□□□ 0.33
SCARF1-203ENST00000434376 USO1O60763 962 aaKnown RBP17.11■□□□□ 0.33
SCARF1-203ENST00000434376 IBSPP21815 317 aaPredicted RBP17.11■□□□□ 0.33
SCARF1-203ENST00000434376 INPP5BP32019 993 aa17.11■□□□□ 0.33
SCARF1-203ENST00000434376 RASA3Q14644 834 aa17.11■□□□□ 0.33
SCARF1-203ENST00000434376 BEND6Q5SZJ8 279 aaPredicted RBP17.11■□□□□ 0.33
SCARF1-203ENST00000434376 NAA35Q5VZE5 725 aa17.11■□□□□ 0.33
SCARF1-203ENST00000434376 HOOK2Q96ED9 719 aa17.11■□□□□ 0.33
SCARF1-203ENST00000434376 ZNF577Q9BSK1 485 aa17.11■□□□□ 0.33
SCARF1-203ENST00000434376 PRPF4BQ13523 1007 aaKnown RBP17.11■□□□□ 0.33
SCARF1-203ENST00000434376 KIAA0753Q2KHM9 967 aa17.11■□□□□ 0.33
SCARF1-203ENST00000434376 PPP1R18Q6NYC8 613 aa17.11■□□□□ 0.33
SCARF1-203ENST00000434376 MICALL1Q8N3F8 863 aa17.11■□□□□ 0.33
SCARF1-203ENST00000434376 IFT81Q8WYA0 676 aa17.11■□□□□ 0.33
SCARF1-203ENST00000434376 NYAP2Q9P242 653 aa17.11■□□□□ 0.33
SCARF1-203ENST00000434376 ADAMTSL1Q8N6G6 1762 aa17.11■□□□□ 0.33
SCARF1-203ENST00000434376 KLRG2A4D1S0 409 aaPredicted RBP17.11■□□□□ 0.33
SCARF1-203ENST00000434376 SPDYE2BA6NHP3 402 aa17.11■□□□□ 0.33
SCARF1-203ENST00000434376 GCOM1H8Y6P7 765 aaPredicted RBP17.11■□□□□ 0.33
SCARF1-203ENST00000434376 POLR2MP0CAP2 368 aa17.11■□□□□ 0.33
SCARF1-203ENST00000434376 SPDYE6P0CI01 402 aa17.11■□□□□ 0.33
SCARF1-203ENST00000434376 GRIPAP1Q4V328 841 aa17.11■□□□□ 0.33
SCARF1-203ENST00000434376 ODR4Q5SWX8 454 aa17.11■□□□□ 0.33
SCARF1-203ENST00000434376 HAUS3Q68CZ6 603 aa17.11■□□□□ 0.33
SCARF1-203ENST00000434376 NIM1KQ8IY84 436 aa17.11■□□□□ 0.33
SCARF1-203ENST00000434376 WDR18Q9BV38 432 aa17.11■□□□□ 0.33
SCARF1-203ENST00000434376 NT5C3AQ9H0P0 336 aa17.11■□□□□ 0.33
SCARF1-203ENST00000434376 CENPHQ9H3R5 247 aa17.11■□□□□ 0.33
SCARF1-203ENST00000434376 HAUS4Q9H6D7 363 aa17.11■□□□□ 0.33
SCARF1-203ENST00000434376 ARMCX3Q9UH62 379 aaPredicted RBP17.11■□□□□ 0.33
SCARF1-203ENST00000434376 IVLP07476 585 aa17.1■□□□□ 0.33
SCARF1-203ENST00000434376 KCNMA1Q12791 1236 aa17.1■□□□□ 0.33
SCARF1-203ENST00000434376 PPP4R3AQ6IN85 833 aa17.1■□□□□ 0.33
SCARF1-203ENST00000434376 POTEAQ6S8J7 498 aa17.1■□□□□ 0.33
SCARF1-203ENST00000434376 LRRC55Q6ZSA7 311 aa17.1■□□□□ 0.33
SCARF1-203ENST00000434376 PHLDB2Q86SQ0 1253 aa17.1■□□□□ 0.33
SCARF1-203ENST00000434376 LDHDQ86WU2 507 aa17.1■□□□□ 0.33
SCARF1-203ENST00000434376 IL31RAQ8NI17 732 aa17.1■□□□□ 0.33
SCARF1-203ENST00000434376 KIFC3Q9BVG8 833 aa17.1■□□□□ 0.33
SCARF1-203ENST00000434376 DNAH12Q6ZR08 3092 aa17.1■□□□□ 0.33
SCARF1-203ENST00000434376 EIF3CLB5ME19 914 aaKnown RBP17.1■□□□□ 0.33
SCARF1-203ENST00000434376 OPLAHO14841 1288 aa17.1■□□□□ 0.33
SCARF1-203ENST00000434376 PDIA5Q14554 519 aa17.1■□□□□ 0.33
SCARF1-203ENST00000434376 KLHL7Q8IXQ5 586 aa17.1■□□□□ 0.33
SCARF1-203ENST00000434376 EIF3CQ99613 913 aaKnown RBP17.1■□□□□ 0.33
SCARF1-203ENST00000434376 WDR11Q9BZH6 1224 aa17.1■□□□□ 0.33
SCARF1-203ENST00000434376 GPRC5CQ9NQ84 441 aa17.1■□□□□ 0.33
SCARF1-203ENST00000434376 ITIH6Q6UXX5 1313 aa17.1■□□□□ 0.33
SCARF1-203ENST00000434376 SFMBT2Q5VUG0 894 aa17.09■□□□□ 0.33
SCARF1-203ENST00000434376 JDP2Q8WYK2 163 aa17.09■□□□□ 0.33
SCARF1-203ENST00000434376 ZSCAN5CA6NGD5 496 aaPredicted RBP17.09■□□□□ 0.33
SCARF1-203ENST00000434376 GFPT2O94808 682 aa17.09■□□□□ 0.33
SCARF1-203ENST00000434376 CXCL9Q07325 125 aa17.09■□□□□ 0.33
SCARF1-203ENST00000434376 DCAF4Q8WV16 495 aa17.09■□□□□ 0.33
SCARF1-203ENST00000434376 ZKSCAN4Q969J2 545 aaPredicted RBP17.09■□□□□ 0.33
SCARF1-203ENST00000434376 DNAJC7Q99615 494 aa17.09■□□□□ 0.33
SCARF1-203ENST00000434376 ACBD3Q9H3P7 528 aa17.09■□□□□ 0.33
SCARF1-203ENST00000434376 WNK3Q9BYP7 1800 aa17.09■□□□□ 0.33
SCARF1-203ENST00000434376 CASZ1Q86V15 1759 aa17.09■□□□□ 0.33
SCARF1-203ENST00000434376 TMEM110-MUSTN1A8MSY1 372 aa17.09■□□□□ 0.33
SCARF1-203ENST00000434376 TACC1O75410 805 aa17.09■□□□□ 0.33
SCARF1-203ENST00000434376 AKAP3O75969 853 aa17.09■□□□□ 0.33
SCARF1-203ENST00000434376 FGFR1OPO95684 399 aaKnown RBP17.09■□□□□ 0.33
SCARF1-203ENST00000434376 SPATA31C1P0DKV0 1188 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms