RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 CFAP36Q96G28 342 aa11.82□□□□□ -0.52
CCDC171-202ENST00000432954 ZNF496Q96IT1 587 aaPredicted RBP11.82□□□□□ -0.52
CCDC171-202ENST00000432954 SEC62Q99442 399 aaKnown RBP11.82□□□□□ -0.52
CCDC171-202ENST00000432954 CIB1Q99828 191 aa11.82□□□□□ -0.52
CCDC171-202ENST00000432954 NUF2Q9BZD4 464 aa11.82□□□□□ -0.52
CCDC171-202ENST00000432954 RNF39Q9H2S5 420 aa11.82□□□□□ -0.52
CCDC171-202ENST00000432954 VTA1Q9NP79 307 aa11.82□□□□□ -0.52
CCDC171-202ENST00000432954 LRCH1Q9Y2L9 728 aa11.82□□□□□ -0.52
CCDC171-202ENST00000432954 GMNCA6NCL1 334 aa11.82□□□□□ -0.52
CCDC171-202ENST00000432954 E7EVH7 732 aa11.82□□□□□ -0.52
CCDC171-202ENST00000432954 MAP3K6O95382 1288 aa11.82□□□□□ -0.52
CCDC171-202ENST00000432954 PDAP1Q13442 181 aaKnown RBP11.82□□□□□ -0.52
CCDC171-202ENST00000432954 ZNF449Q6P9G9 518 aa11.82□□□□□ -0.52
CCDC171-202ENST00000432954 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.82□□□□□ -0.52
CCDC171-202ENST00000432954 RFPL4BQ6ZWI9 263 aa11.82□□□□□ -0.52
CCDC171-202ENST00000432954 RASGRP2Q7LDG7 609 aa11.82□□□□□ -0.52
CCDC171-202ENST00000432954 C7orf57Q8NEG2 295 aa11.82□□□□□ -0.52
CCDC171-202ENST00000432954 RUBCNQ92622 972 aa11.82□□□□□ -0.52
CCDC171-202ENST00000432954 OLFM3Q96PB7 478 aa11.82□□□□□ -0.52
CCDC171-202ENST00000432954 RBM14Q96PK6 669 aaKnown RBP11.82□□□□□ -0.52
CCDC171-202ENST00000432954 PPP1R10Q96QC0 940 aaKnown RBP11.82□□□□□ -0.52
CCDC171-202ENST00000432954 CENPKQ9BS16 269 aa11.82□□□□□ -0.52
CCDC171-202ENST00000432954 SNX25Q9H3E2 840 aa11.82□□□□□ -0.52
CCDC171-202ENST00000432954 CNGB3Q9NQW8 809 aa11.82□□□□□ -0.52
CCDC171-202ENST00000432954 THAP1Q9NVV9 213 aa11.82□□□□□ -0.52
CCDC171-202ENST00000432954 DACT1Q9NYF0 836 aa11.82□□□□□ -0.52
CCDC171-202ENST00000432954 ADAM22Q9P0K1 906 aa11.82□□□□□ -0.52
CCDC171-202ENST00000432954 ZC3H7BQ9UGR2 993 aaKnown RBP11.82□□□□□ -0.52
CCDC171-202ENST00000432954 STAG3Q9UJ98 1225 aa11.82□□□□□ -0.52
CCDC171-202ENST00000432954 FBXL5Q9UKA1 691 aa11.82□□□□□ -0.52
CCDC171-202ENST00000432954 HBS1LQ9Y450 684 aaKnown RBP11.82□□□□□ -0.52
CCDC171-202ENST00000432954 TACC3Q9Y6A5 838 aa11.82□□□□□ -0.52
CCDC171-202ENST00000432954 TSPAN9O75954 239 aa11.81□□□□□ -0.52
CCDC171-202ENST00000432954 FKBP9O95302 570 aa11.81□□□□□ -0.52
CCDC171-202ENST00000432954 GNAI2P04899 355 aa11.81□□□□□ -0.52
CCDC171-202ENST00000432954 IFIT2P09913 472 aaKnown RBP11.81□□□□□ -0.52
CCDC171-202ENST00000432954 COL6A1P12109 1028 aa11.81□□□□□ -0.52
CCDC171-202ENST00000432954 RXRBP28702 533 aa11.81□□□□□ -0.52
CCDC171-202ENST00000432954 ARFIP2P53365 341 aa11.81□□□□□ -0.52
CCDC171-202ENST00000432954 SEC24CP53992 1094 aa11.81□□□□□ -0.52
CCDC171-202ENST00000432954 TBX4P57082 545 aa11.81□□□□□ -0.52
CCDC171-202ENST00000432954 PPP2R2AP63151 447 aa11.81□□□□□ -0.52
CCDC171-202ENST00000432954 ATP11AP98196 1134 aa11.81□□□□□ -0.52
CCDC171-202ENST00000432954 GUCY2DQ02846 1103 aa11.81□□□□□ -0.52
CCDC171-202ENST00000432954 DCTN2Q13561 401 aaKnown RBP11.81□□□□□ -0.52
CCDC171-202ENST00000432954 MAPRE1Q15691 268 aaKnown RBP11.81□□□□□ -0.52
CCDC171-202ENST00000432954 SPATA1Q5VX52 437 aa11.81□□□□□ -0.52
CCDC171-202ENST00000432954 LONP2Q86WA8 852 aa11.81□□□□□ -0.52
CCDC171-202ENST00000432954 HACE1Q8IYU2 909 aa11.81□□□□□ -0.52
CCDC171-202ENST00000432954 GIMAP8Q8ND71 665 aaPredicted RBP11.81□□□□□ -0.52
CCDC171-202ENST00000432954 CRNKL1Q9BZJ0 848 aaKnown RBP11.81□□□□□ -0.52
CCDC171-202ENST00000432954 TRIM17Q9Y577 477 aa11.81□□□□□ -0.52
CCDC171-202ENST00000432954 PCDHB6Q9Y5E3 794 aa11.81□□□□□ -0.52
CCDC171-202ENST00000432954 PCDHB4Q9Y5E5 795 aa11.81□□□□□ -0.52
CCDC171-202ENST00000432954 UHRF1BP1Q6BDS2 1440 aa11.81□□□□□ -0.52
CCDC171-202ENST00000432954 FGD6Q6ZV73 1430 aa11.81□□□□□ -0.52
CCDC171-202ENST00000432954 HIP1O00291 1037 aa11.81□□□□□ -0.52
CCDC171-202ENST00000432954 HSD17B2P37059 387 aa11.81□□□□□ -0.52
CCDC171-202ENST00000432954 ANO4Q32M45 955 aa11.81□□□□□ -0.52
CCDC171-202ENST00000432954 CORO6Q6QEF8 472 aa11.81□□□□□ -0.52
CCDC171-202ENST00000432954 C11orf57Q6ZUT1 292 aaPredicted RBP11.81□□□□□ -0.52
CCDC171-202ENST00000432954 INTS8Q75QN2 995 aaKnown RBP11.81□□□□□ -0.52
CCDC171-202ENST00000432954 FASTKD5Q7L8L6 764 aaKnown RBP11.81□□□□□ -0.52
CCDC171-202ENST00000432954 OSBP2Q969R2 916 aa11.81□□□□□ -0.52
CCDC171-202ENST00000432954 HAUS8Q9BT25 410 aa11.81□□□□□ -0.52
CCDC171-202ENST00000432954 SHCBP1LQ9BZQ2 653 aa11.81□□□□□ -0.52
CCDC171-202ENST00000432954 SMARCAD1Q9H4L7 1026 aa11.81□□□□□ -0.52
CCDC171-202ENST00000432954 ESF1Q9H501 851 aaKnown RBP11.81□□□□□ -0.52
CCDC171-202ENST00000432954 SCPEP1Q9HB40 452 aa11.81□□□□□ -0.52
CCDC171-202ENST00000432954 IQANK1A0A1B0GTG1 560 aa11.8□□□□□ -0.52
CCDC171-202ENST00000432954 GOLGA8IPA6NC78 632 aa11.8□□□□□ -0.52
CCDC171-202ENST00000432954 E9PBE3 544 aa11.8□□□□□ -0.52
CCDC171-202ENST00000432954 FARP2O94887 1054 aaPredicted RBP11.8□□□□□ -0.52
CCDC171-202ENST00000432954 MYL6BP14649 208 aa11.8□□□□□ -0.52
CCDC171-202ENST00000432954 CALB2P22676 271 aa11.8□□□□□ -0.52
CCDC171-202ENST00000432954 LACTBP83111 547 aaPredicted RBP11.8□□□□□ -0.52
CCDC171-202ENST00000432954 GUCY1A3Q02108 690 aa11.8□□□□□ -0.52
CCDC171-202ENST00000432954 KIF23Q02241 960 aaPredicted RBP11.8□□□□□ -0.52
CCDC171-202ENST00000432954 LIN52Q52LA3 116 aa11.8□□□□□ -0.52
CCDC171-202ENST00000432954 TMEM139Q8IV31 216 aa11.8□□□□□ -0.52
CCDC171-202ENST00000432954 ALDH16A1Q8IZ83 802 aa11.8□□□□□ -0.52
CCDC171-202ENST00000432954 BBS5Q8N3I7 341 aa11.8□□□□□ -0.52
CCDC171-202ENST00000432954 DDHD1Q8NEL9 900 aa11.8□□□□□ -0.52
CCDC171-202ENST00000432954 AENQ8WTP8 325 aaKnown RBP11.8□□□□□ -0.52
CCDC171-202ENST00000432954 HERVK_113Q902F9 699 aa11.8□□□□□ -0.52
CCDC171-202ENST00000432954 IQCDQ96DY2 449 aa11.8□□□□□ -0.52
CCDC171-202ENST00000432954 TTC1Q99614 292 aa11.8□□□□□ -0.52
CCDC171-202ENST00000432954 EHMT1Q9H9B1 1298 aa11.8□□□□□ -0.52
CCDC171-202ENST00000432954 CD93Q9NPY3 652 aa11.8□□□□□ -0.52
CCDC171-202ENST00000432954 PTTG2Q9NZH5 202 aa11.8□□□□□ -0.52
CCDC171-202ENST00000432954 DNAJC16Q9Y2G8 782 aa11.8□□□□□ -0.52
CCDC171-202ENST00000432954 KDM6AO15550 1401 aaPredicted RBP11.8□□□□□ -0.52
CCDC171-202ENST00000432954 TTC21AQ8NDW8 1320 aa11.8□□□□□ -0.52
CCDC171-202ENST00000432954 GNPATO15228 680 aa11.79□□□□□ -0.52
CCDC171-202ENST00000432954 RPN1P04843 607 aaKnown RBP11.79□□□□□ -0.52
CCDC171-202ENST00000432954 CFL1P23528 166 aaKnown RBP11.79□□□□□ -0.52
CCDC171-202ENST00000432954 CSTF2P33240 577 aaKnown RBP eCLIP11.79□□□□□ -0.52
CCDC171-202ENST00000432954 ALDH5A1P51649 535 aaPredicted RBP11.79□□□□□ -0.52
CCDC171-202ENST00000432954 PKD2Q13563 968 aa11.79□□□□□ -0.52
CCDC171-202ENST00000432954 EPHA7Q15375 998 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms