RNA–Protein interactions for RNA: ENST00000430454.5

HDAC9-211, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-211ENST00000430454 CTSHP09668 335 aa10.37□□□□□ -0.75
HDAC9-211ENST00000430454 MYOGP15173 224 aa10.37□□□□□ -0.75
HDAC9-211ENST00000430454 XBP1P17861 261 aa10.37□□□□□ -0.75
HDAC9-211ENST00000430454 POU3F3P20264 500 aaPredicted RBP10.37□□□□□ -0.75
HDAC9-211ENST00000430454 MARK3P27448 753 aa10.37□□□□□ -0.75
HDAC9-211ENST00000430454 PDIA3P30101 505 aaKnown RBP10.37□□□□□ -0.75
HDAC9-211ENST00000430454 CLK2P49760 499 aaKnown RBP10.37□□□□□ -0.75
HDAC9-211ENST00000430454 NLRP5P59047 1200 aa10.37□□□□□ -0.75
HDAC9-211ENST00000430454 ACTR2P61160 394 aa10.37□□□□□ -0.75
HDAC9-211ENST00000430454 TAP1Q03518 808 aa10.37□□□□□ -0.75
HDAC9-211ENST00000430454 ANKRD1Q15327 319 aa10.37□□□□□ -0.75
HDAC9-211ENST00000430454 ODR4Q5SWX8 454 aa10.37□□□□□ -0.75
HDAC9-211ENST00000430454 TRIM50Q86XT4 487 aa10.37□□□□□ -0.75
HDAC9-211ENST00000430454 SMAP1Q8IYB5 467 aaPredicted RBP10.37□□□□□ -0.75
HDAC9-211ENST00000430454 DBF4BQ8NFT6 615 aa10.37□□□□□ -0.75
HDAC9-211ENST00000430454 PPM1EQ8WY54 764 aa10.37□□□□□ -0.75
HDAC9-211ENST00000430454 ARNTL2Q8WYA1 636 aa10.37□□□□□ -0.75
HDAC9-211ENST00000430454 ZNF274Q96GC6 653 aaPredicted RBP10.37□□□□□ -0.75
HDAC9-211ENST00000430454 TGS1Q96RS0 853 aaKnown RBP10.37□□□□□ -0.75
HDAC9-211ENST00000430454 ZNF577Q9BSK1 485 aa10.37□□□□□ -0.75
HDAC9-211ENST00000430454 IFIH1Q9BYX4 1025 aaKnown RBP10.37□□□□□ -0.75
HDAC9-211ENST00000430454 BCAS3Q9H6U6 928 aa10.37□□□□□ -0.75
HDAC9-211ENST00000430454 FAM217BQ9NTX9 383 aaPredicted RBP10.37□□□□□ -0.75
HDAC9-211ENST00000430454 PDRG1Q9NUG6 133 aa10.37□□□□□ -0.75
HDAC9-211ENST00000430454 LMCD1Q9NZU5 365 aa10.37□□□□□ -0.75
HDAC9-211ENST00000430454 THEGQ9P2T0 379 aa10.37□□□□□ -0.75
HDAC9-211ENST00000430454 CEP131Q9UPN4 1083 aa10.37□□□□□ -0.75
HDAC9-211ENST00000430454 POTEB3A0JP26 581 aa10.36□□□□□ -0.75
HDAC9-211ENST00000430454 IPO5O00410 1097 aaKnown RBP10.36□□□□□ -0.75
HDAC9-211ENST00000430454 PSAPP07602 524 aa10.36□□□□□ -0.75
HDAC9-211ENST00000430454 CPA1P15085 419 aa10.36□□□□□ -0.75
HDAC9-211ENST00000430454 USP11P51784 963 aa10.36□□□□□ -0.75
HDAC9-211ENST00000430454 IGBP1P78318 339 aa10.36□□□□□ -0.75
HDAC9-211ENST00000430454 ADAM17P78536 824 aa10.36□□□□□ -0.75
HDAC9-211ENST00000430454 MRPS5P82675 430 aaKnown RBP10.36□□□□□ -0.75
HDAC9-211ENST00000430454 KRT76Q01546 638 aa10.36□□□□□ -0.75
HDAC9-211ENST00000430454 COL9A3Q14050 684 aaPredicted RBP10.36□□□□□ -0.75
HDAC9-211ENST00000430454 GPNMBQ14956 572 aa10.36□□□□□ -0.75
HDAC9-211ENST00000430454 SKIV2LQ15477 1246 aaKnown RBP10.36□□□□□ -0.75
HDAC9-211ENST00000430454 TJAP1Q5JTD0 557 aa10.36□□□□□ -0.75
HDAC9-211ENST00000430454 TYW1BQ6NUM6 668 aa10.36□□□□□ -0.75
HDAC9-211ENST00000430454 TRAF7Q6Q0C0 670 aa10.36□□□□□ -0.75
HDAC9-211ENST00000430454 POTEBQ6S5H4 581 aa10.36□□□□□ -0.75
HDAC9-211ENST00000430454 CKAP2LQ8IYA6 745 aa10.36□□□□□ -0.75
HDAC9-211ENST00000430454 MYOCDQ8IZQ8 938 aa10.36□□□□□ -0.75
HDAC9-211ENST00000430454 ZNF710Q8N1W2 664 aa10.36□□□□□ -0.75
HDAC9-211ENST00000430454 WNT8BQ93098 351 aa10.36□□□□□ -0.75
HDAC9-211ENST00000430454 PHKBQ93100 1093 aa10.36□□□□□ -0.75
HDAC9-211ENST00000430454 YME1L1Q96TA2 773 aa10.36□□□□□ -0.75
HDAC9-211ENST00000430454 FTHL17Q9BXU8 183 aa10.36□□□□□ -0.75
HDAC9-211ENST00000430454 TMEM260Q9NX78 707 aa10.36□□□□□ -0.75
HDAC9-211ENST00000430454 SQORQ9Y6N5 450 aa10.36□□□□□ -0.75
HDAC9-211ENST00000430454 MBLAC1A4D2B0 266 aaPredicted RBP10.35□□□□□ -0.75
HDAC9-211ENST00000430454 HBP1O60381 514 aa10.35□□□□□ -0.75
HDAC9-211ENST00000430454 ATG7O95352 703 aa10.35□□□□□ -0.75
HDAC9-211ENST00000430454 ARP10275 920 aa10.35□□□□□ -0.75
HDAC9-211ENST00000430454 INSRRP14616 1297 aa10.35□□□□□ -0.75
HDAC9-211ENST00000430454 ANAPC15P60006 121 aa10.35□□□□□ -0.75
HDAC9-211ENST00000430454 CCT2P78371 535 aaKnown RBP10.35□□□□□ -0.75
HDAC9-211ENST00000430454 DEFB103AP81534 67 aa10.35□□□□□ -0.75
HDAC9-211ENST00000430454 MRPS6P82932 125 aaKnown RBP10.35□□□□□ -0.75
HDAC9-211ENST00000430454 HIC1Q14526 733 aa10.35□□□□□ -0.75
HDAC9-211ENST00000430454 MBTPS1Q14703 1052 aa10.35□□□□□ -0.75
HDAC9-211ENST00000430454 CCDC85BQ15834 202 aaPredicted RBP10.35□□□□□ -0.75
HDAC9-211ENST00000430454 PTPROQ16827 1216 aa10.35□□□□□ -0.75
HDAC9-211ENST00000430454 ZNF484Q5JVG2 852 aa10.35□□□□□ -0.75
HDAC9-211ENST00000430454 ZNF746Q6NUN9 644 aaPredicted RBP10.35□□□□□ -0.75
HDAC9-211ENST00000430454 PDXDC2PQ6P474 469 aa10.35□□□□□ -0.75
HDAC9-211ENST00000430454 MICALL1Q8N3F8 863 aa10.35□□□□□ -0.75
HDAC9-211ENST00000430454 CYP2W1Q8TAV3 490 aa10.35□□□□□ -0.75
HDAC9-211ENST00000430454 WASF1Q92558 559 aa10.35□□□□□ -0.75
HDAC9-211ENST00000430454 PGBD1Q96JS3 809 aa10.35□□□□□ -0.75
HDAC9-211ENST00000430454 FAM167AQ96KS9 214 aa10.35□□□□□ -0.75
HDAC9-211ENST00000430454 ZNF302Q9NR11 478 aa10.35□□□□□ -0.75
HDAC9-211ENST00000430454 COG5Q9UP83 839 aa10.35□□□□□ -0.75
HDAC9-211ENST00000430454 RWDD3Q9Y3V2 267 aa10.35□□□□□ -0.75
HDAC9-211ENST00000430454 SAMM50Q9Y512 469 aa10.35□□□□□ -0.75
HDAC9-211ENST00000430454 PCDHA2Q9Y5H9 948 aa10.35□□□□□ -0.75
HDAC9-211ENST00000430454 COL1A2P08123 1366 aa10.35□□□□□ -0.75
HDAC9-211ENST00000430454 SCN5AQ14524 2016 aa10.34□□□□□ -0.75
HDAC9-211ENST00000430454 UNC80Q8N2C7 3258 aa10.34□□□□□ -0.75
HDAC9-211ENST00000430454 TRIP12Q14669 1992 aaPredicted RBP10.34□□□□□ -0.75
HDAC9-211ENST00000430454 SMIM35A0A1B0GVV1 85 aa10.34□□□□□ -0.75
HDAC9-211ENST00000430454 DDX39AO00148 427 aaKnown RBP10.34□□□□□ -0.75
HDAC9-211ENST00000430454 CIITAP33076 1130 aa10.34□□□□□ -0.75
HDAC9-211ENST00000430454 ERVK-21P61565 698 aa10.34□□□□□ -0.75
HDAC9-211ENST00000430454 ITGB3BPQ13352 177 aaPredicted RBP10.34□□□□□ -0.75
HDAC9-211ENST00000430454 ADGRE1Q14246 886 aa10.34□□□□□ -0.75
HDAC9-211ENST00000430454 PLCB4Q15147 1175 aa10.34□□□□□ -0.75
HDAC9-211ENST00000430454 PKN1Q16512 942 aa10.34□□□□□ -0.75
HDAC9-211ENST00000430454 PRR16Q569H4 304 aa10.34□□□□□ -0.75
HDAC9-211ENST00000430454 FAM117BQ6P1L5 589 aa10.34□□□□□ -0.75
HDAC9-211ENST00000430454 TSHZ1Q6ZSZ6 1077 aa10.34□□□□□ -0.75
HDAC9-211ENST00000430454 ATP8B4Q8TF62 1192 aa10.34□□□□□ -0.75
HDAC9-211ENST00000430454 DNAJB3Q8WWF6 145 aa10.34□□□□□ -0.75
HDAC9-211ENST00000430454 TOP1MTQ969P6 601 aa10.34□□□□□ -0.75
HDAC9-211ENST00000430454 IL17RAQ96F46 866 aa10.34□□□□□ -0.75
HDAC9-211ENST00000430454 NAP1L4Q99733 375 aaKnown RBP10.34□□□□□ -0.75
HDAC9-211ENST00000430454 FAM49AQ9H0Q0 323 aaPredicted RBP10.34□□□□□ -0.75
HDAC9-211ENST00000430454 SLKQ9H2G2 1235 aaPredicted RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms