RNA–Protein interactions for RNA: ENST00000430433.5

MRPL55-221, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5 BASIC

Gene MRPL55, Length 864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-221ENST00000430433 CXCL10P02778 98 aa12.87□□□□□ -0.35
MRPL55-221ENST00000430433 INSRRP14616 1297 aa12.87□□□□□ -0.35
MRPL55-221ENST00000430433 USP11P51784 963 aa12.87□□□□□ -0.35
MRPL55-221ENST00000430433 RABGGTBP53611 331 aa12.87□□□□□ -0.35
MRPL55-221ENST00000430433 MBTPS1Q14703 1052 aa12.87□□□□□ -0.35
MRPL55-221ENST00000430433 GPNMBQ14956 572 aa12.87□□□□□ -0.35
MRPL55-221ENST00000430433 ME3Q16798 604 aa12.87□□□□□ -0.35
MRPL55-221ENST00000430433 C8orf34Q49A92 452 aa12.87□□□□□ -0.35
MRPL55-221ENST00000430433 MIS18BP1Q6P0N0 1132 aa12.87□□□□□ -0.35
MRPL55-221ENST00000430433 TAF2Q6P1X5 1199 aa12.87□□□□□ -0.35
MRPL55-221ENST00000430433 CNKSR3Q6P9H4 555 aa12.87□□□□□ -0.35
MRPL55-221ENST00000430433 TRAF7Q6Q0C0 670 aa12.87□□□□□ -0.35
MRPL55-221ENST00000430433 PLPPR4Q7Z2D5 763 aa12.87□□□□□ -0.35
MRPL55-221ENST00000430433 KRT25Q7Z3Z0 450 aa12.87□□□□□ -0.35
MRPL55-221ENST00000430433 RSPH3Q86UC2 560 aa12.87□□□□□ -0.35
MRPL55-221ENST00000430433 TET1Q8NFU7 2136 aa12.87□□□□□ -0.35
MRPL55-221ENST00000430433 GTF3C6Q969F1 213 aa12.87□□□□□ -0.35
MRPL55-221ENST00000430433 CDX2Q99626 313 aaPredicted RBP12.87□□□□□ -0.35
MRPL55-221ENST00000430433 NKX2-4Q9H2Z4 354 aa12.87□□□□□ -0.35
MRPL55-221ENST00000430433 ZNF576Q9H609 170 aa12.87□□□□□ -0.35
MRPL55-221ENST00000430433 CCDC194A0A1B0GVG4 234 aa12.86□□□□□ -0.35
MRPL55-221ENST00000430433 POTEB3A0JP26 581 aa12.86□□□□□ -0.35
MRPL55-221ENST00000430433 RRN3P2A6NIE6 340 aa12.86□□□□□ -0.35
MRPL55-221ENST00000430433 DHX15O43143 795 aaKnown RBP12.86□□□□□ -0.35
MRPL55-221ENST00000430433 LARGE1O95461 756 aa12.86□□□□□ -0.35
MRPL55-221ENST00000430433 CTDNEP1O95476 244 aa12.86□□□□□ -0.35
MRPL55-221ENST00000430433 SLC26A2P50443 739 aa12.86□□□□□ -0.35
MRPL55-221ENST00000430433 ADAM17P78536 824 aa12.86□□□□□ -0.35
MRPL55-221ENST00000430433 KRT76Q01546 638 aa12.86□□□□□ -0.35
MRPL55-221ENST00000430433 IKBKEQ14164 716 aa12.86□□□□□ -0.35
MRPL55-221ENST00000430433 PLCB4Q15147 1175 aa12.86□□□□□ -0.35
MRPL55-221ENST00000430433 NONOQ15233 471 aaKnown RBP eCLIP12.86□□□□□ -0.35
MRPL55-221ENST00000430433 ZNF746Q6NUN9 644 aaPredicted RBP12.86□□□□□ -0.35
MRPL55-221ENST00000430433 PDXDC2PQ6P474 469 aa12.86□□□□□ -0.35
MRPL55-221ENST00000430433 POTEBQ6S5H4 581 aa12.86□□□□□ -0.35
MRPL55-221ENST00000430433 RUFY4Q6ZNE9 571 aa12.86□□□□□ -0.35
MRPL55-221ENST00000430433 CKAP2LQ8IYA6 745 aa12.86□□□□□ -0.35
MRPL55-221ENST00000430433 MYLIPQ8WY64 445 aa12.86□□□□□ -0.35
MRPL55-221ENST00000430433 SLC28A3Q9HAS3 691 aa12.86□□□□□ -0.35
MRPL55-221ENST00000430433 ZNF302Q9NR11 478 aa12.86□□□□□ -0.35
MRPL55-221ENST00000430433 YBX2Q9Y2T7 364 aaKnown RBP12.86□□□□□ -0.35
MRPL55-221ENST00000430433 SAMM50Q9Y512 469 aa12.86□□□□□ -0.35
MRPL55-221ENST00000430433 PCDHA11Q9Y5I1 949 aa12.86□□□□□ -0.35
MRPL55-221ENST00000430433 ABHD14A-ACY1A0A1B0GW23 586 aa12.85□□□□□ -0.35
MRPL55-221ENST00000430433 KIF28PB7ZC32 967 aa12.85□□□□□ -0.35
MRPL55-221ENST00000430433 MSH4O15457 936 aa12.85□□□□□ -0.35
MRPL55-221ENST00000430433 GAS7O60861 476 aa12.85□□□□□ -0.35
MRPL55-221ENST00000430433 EFCAB14O75071 495 aa12.85□□□□□ -0.35
MRPL55-221ENST00000430433 ATG7O95352 703 aa12.85□□□□□ -0.35
MRPL55-221ENST00000430433 PSAPP07602 524 aa12.85□□□□□ -0.35
MRPL55-221ENST00000430433 WDR5P61964 334 aaKnown RBP12.85□□□□□ -0.35
MRPL55-221ENST00000430433 GRIN2CQ14957 1233 aa12.85□□□□□ -0.35
MRPL55-221ENST00000430433 NPY5RQ15761 445 aa12.85□□□□□ -0.35
MRPL55-221ENST00000430433 INF2Q27J81 1249 aa12.85□□□□□ -0.35
MRPL55-221ENST00000430433 PPP2R2DQ66LE6 453 aa12.85□□□□□ -0.35
MRPL55-221ENST00000430433 SWSAP1Q6NVH7 229 aa12.85□□□□□ -0.35
MRPL55-221ENST00000430433 ABHD15Q6UXT9 468 aa12.85□□□□□ -0.35
MRPL55-221ENST00000430433 HERC6Q8IVU3 1022 aa12.85□□□□□ -0.35
MRPL55-221ENST00000430433 CCDC60Q8IWA6 550 aaPredicted RBP12.85□□□□□ -0.35
MRPL55-221ENST00000430433 SMAP1Q8IYB5 467 aaPredicted RBP12.85□□□□□ -0.35
MRPL55-221ENST00000430433 PHOSPHO2Q8TCD6 241 aa12.85□□□□□ -0.35
MRPL55-221ENST00000430433 TRAPPC12Q8WVT3 735 aa12.85□□□□□ -0.35
MRPL55-221ENST00000430433 SEPT8Q92599 483 aa12.85□□□□□ -0.35
MRPL55-221ENST00000430433 LENG9Q96B70 501 aa12.85□□□□□ -0.35
MRPL55-221ENST00000430433 ZBED2Q9BTP6 218 aa12.85□□□□□ -0.35
MRPL55-221ENST00000430433 PHF20Q9BVI0 1012 aa12.85□□□□□ -0.35
MRPL55-221ENST00000430433 FAM49AQ9H0Q0 323 aaPredicted RBP12.85□□□□□ -0.35
MRPL55-221ENST00000430433 GJB4Q9NTQ9 266 aa12.85□□□□□ -0.35
MRPL55-221ENST00000430433 IGKV6D-21A0A0A0MT36 114 aa12.84□□□□□ -0.35
MRPL55-221ENST00000430433 MBLAC1A4D2B0 266 aaPredicted RBP12.84□□□□□ -0.35
MRPL55-221ENST00000430433 WDR64B1ANS9 1081 aa12.84□□□□□ -0.35
MRPL55-221ENST00000430433 M0R2N6 131 aa12.84□□□□□ -0.35
MRPL55-221ENST00000430433 CHMP2AO43633 222 aa12.84□□□□□ -0.35
MRPL55-221ENST00000430433 TDP2O95551 362 aa12.84□□□□□ -0.35
MRPL55-221ENST00000430433 RPLP2P05387 115 aaKnown RBP12.84□□□□□ -0.35
MRPL55-221ENST00000430433 MYOGP15173 224 aa12.84□□□□□ -0.35
MRPL55-221ENST00000430433 FOSL2P15408 326 aa12.84□□□□□ -0.35
MRPL55-221ENST00000430433 FOSBP53539 338 aa12.84□□□□□ -0.35
MRPL55-221ENST00000430433 MARCH8Q5T0T0 291 aa12.84□□□□□ -0.35
MRPL55-221ENST00000430433 LRCH2Q5VUJ6 765 aa12.84□□□□□ -0.35
MRPL55-221ENST00000430433 NSUN7Q8NE18 718 aaKnown RBP12.84□□□□□ -0.35
MRPL55-221ENST00000430433 DBF4BQ8NFT6 615 aa12.84□□□□□ -0.35
MRPL55-221ENST00000430433 ATP8B4Q8TF62 1192 aa12.84□□□□□ -0.35
MRPL55-221ENST00000430433 DNAJB3Q8WWF6 145 aa12.84□□□□□ -0.35
MRPL55-221ENST00000430433 ZBTB10Q96DT7 871 aa12.84□□□□□ -0.35
MRPL55-221ENST00000430433 RIT2Q99578 217 aa12.84□□□□□ -0.35
MRPL55-221ENST00000430433 TEKT3Q9BXF9 490 aa12.84□□□□□ -0.35
MRPL55-221ENST00000430433 BRMS1Q9HCU9 246 aa12.84□□□□□ -0.35
MRPL55-221ENST00000430433 LIMCH1Q9UPQ0 1083 aa12.84□□□□□ -0.35
MRPL55-221ENST00000430433 PCDHA10Q9Y5I2 948 aa12.84□□□□□ -0.35
MRPL55-221ENST00000430433 CHD9Q3L8U1 2897 aa12.84□□□□□ -0.35
MRPL55-221ENST00000430433 GBF1Q92538 1859 aa12.84□□□□□ -0.35
MRPL55-221ENST00000430433 M0QZ92 97 aa12.83□□□□□ -0.36
MRPL55-221ENST00000430433 EDIL3O43854 480 aa12.83□□□□□ -0.36
MRPL55-221ENST00000430433 TLL1O43897 1013 aa12.83□□□□□ -0.36
MRPL55-221ENST00000430433 HBP1O60381 514 aa12.83□□□□□ -0.36
MRPL55-221ENST00000430433 JAK2O60674 1132 aa12.83□□□□□ -0.36
MRPL55-221ENST00000430433 CA3P07451 260 aa12.83□□□□□ -0.36
MRPL55-221ENST00000430433 FDPSP14324 419 aaKnown RBP12.83□□□□□ -0.36
MRPL55-221ENST00000430433 DEFB103AP81534 67 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms