RNA–Protein interactions for RNA: ENST00000429433.3

BEND3-202, Transcript of BEN domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEND3, Length 6,654 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEND3-202ENST00000429433 TARSL2A2RTX5 802 aaKnown RBP11.29□□□□□ -0.6
BEND3-202ENST00000429433 HAUS5O94927 633 aa11.29□□□□□ -0.6
BEND3-202ENST00000429433 TAC1P20366 129 aa11.29□□□□□ -0.6
BEND3-202ENST00000429433 LIFRP42702 1097 aa11.29□□□□□ -0.6
BEND3-202ENST00000429433 SERPINB4P48594 390 aa11.29□□□□□ -0.6
BEND3-202ENST00000429433 ARHGDIAP52565 204 aa11.29□□□□□ -0.6
BEND3-202ENST00000429433 ARL4CP56559 192 aa11.29□□□□□ -0.6
BEND3-202ENST00000429433 PPP2R2AP63151 447 aa11.29□□□□□ -0.6
BEND3-202ENST00000429433 BASP1P80723 227 aaKnown RBP11.29□□□□□ -0.6
BEND3-202ENST00000429433 PDXDC1Q6P996 788 aa11.29□□□□□ -0.6
BEND3-202ENST00000429433 FAM133AQ8N9E0 248 aa11.29□□□□□ -0.6
BEND3-202ENST00000429433 ANKRD36BP1Q96IX9 119 aa11.29□□□□□ -0.6
BEND3-202ENST00000429433 DBNLQ9UJU6 430 aaKnown RBP11.29□□□□□ -0.6
BEND3-202ENST00000429433 SNX5Q9Y5X3 404 aa11.29□□□□□ -0.6
BEND3-202ENST00000429433 KPNA7A9QM74 516 aa11.29□□□□□ -0.6
BEND3-202ENST00000429433 HNRNPDLO14979 420 aaKnown RBP11.29□□□□□ -0.6
BEND3-202ENST00000429433 TLR3O15455 904 aaKnown RBP11.29□□□□□ -0.6
BEND3-202ENST00000429433 FOXD4Q12950 439 aaPredicted RBP11.29□□□□□ -0.6
BEND3-202ENST00000429433 SMYD2Q9NRG4 433 aa11.29□□□□□ -0.6
BEND3-202ENST00000429433 WDR70Q9NW82 654 aa11.29□□□□□ -0.6
BEND3-202ENST00000429433 TBK1Q9UHD2 729 aa11.29□□□□□ -0.6
BEND3-202ENST00000429433 TRIM33Q9UPN9 1127 aa11.29□□□□□ -0.6
BEND3-202ENST00000429433 KIF21AQ7Z4S6 1674 aa11.29□□□□□ -0.6
BEND3-202ENST00000429433 RPAP1Q9BWH6 1393 aaPredicted RBP11.29□□□□□ -0.6
BEND3-202ENST00000429433 SPDYE16A6NNV3 312 aaPredicted RBP11.29□□□□□ -0.6
BEND3-202ENST00000429433 PRPF3O43395 683 aaKnown RBP11.29□□□□□ -0.6
BEND3-202ENST00000429433 ATXN8OSP0DMR3 200 aa11.29□□□□□ -0.6
BEND3-202ENST00000429433 IFRD2Q12894 506 aaPredicted RBP11.29□□□□□ -0.6
BEND3-202ENST00000429433 BIRC2Q13490 618 aa11.29□□□□□ -0.6
BEND3-202ENST00000429433 SMAD1Q15797 465 aaKnown RBP11.29□□□□□ -0.6
BEND3-202ENST00000429433 SPDYE2Q495Y8 402 aa11.29□□□□□ -0.6
BEND3-202ENST00000429433 SPOPLQ6IQ16 392 aa11.29□□□□□ -0.6
BEND3-202ENST00000429433 DARS2Q6PI48 645 aaKnown RBP11.29□□□□□ -0.6
BEND3-202ENST00000429433 MCUQ8NE86 351 aa11.29□□□□□ -0.6
BEND3-202ENST00000429433 CEP70Q8NHQ1 597 aa11.29□□□□□ -0.6
BEND3-202ENST00000429433 RBM41Q96IZ5 413 aaKnown RBP11.29□□□□□ -0.6
BEND3-202ENST00000429433 ANLNQ9NQW6 1124 aa11.29□□□□□ -0.6
BEND3-202ENST00000429433 GCNT4Q9P109 453 aa11.29□□□□□ -0.6
BEND3-202ENST00000429433 SUN2Q9UH99 717 aa11.29□□□□□ -0.6
BEND3-202ENST00000429433 E9PMD0 336 aa11.29□□□□□ -0.6
BEND3-202ENST00000429433 ZFXP17010 805 aaPredicted RBP11.29□□□□□ -0.6
BEND3-202ENST00000429433 IRX1P78414 480 aaPredicted RBP11.29□□□□□ -0.6
BEND3-202ENST00000429433 TAF1BQ53T94 588 aaPredicted RBP11.29□□□□□ -0.6
BEND3-202ENST00000429433 CAPRIN2Q6IMN6 1127 aaKnown RBP11.29□□□□□ -0.6
BEND3-202ENST00000429433 DCLK2Q8N568 766 aa11.29□□□□□ -0.6
BEND3-202ENST00000429433 DNAAF3Q8N9W5 541 aa11.29□□□□□ -0.6
BEND3-202ENST00000429433 ZNF579Q8NAF0 562 aaKnown RBP11.29□□□□□ -0.6
BEND3-202ENST00000429433 PIK3R5Q8WYR1 880 aa11.29□□□□□ -0.6
BEND3-202ENST00000429433 SPC25Q9HBM1 224 aa11.29□□□□□ -0.6
BEND3-202ENST00000429433 INTUQ9ULD6 942 aa11.29□□□□□ -0.6
BEND3-202ENST00000429433 CLEC11AQ9Y240 323 aa11.29□□□□□ -0.6
BEND3-202ENST00000429433 THRAP3Q9Y2W1 955 aaKnown RBP11.29□□□□□ -0.6
BEND3-202ENST00000429433 ZNF189O75820 626 aaPredicted RBP11.29□□□□□ -0.6
BEND3-202ENST00000429433 NCF2P19878 526 aaPredicted RBP11.29□□□□□ -0.6
BEND3-202ENST00000429433 PHKA1P46020 1223 aa11.29□□□□□ -0.6
BEND3-202ENST00000429433 KCNJ6P48051 423 aa11.29□□□□□ -0.6
BEND3-202ENST00000429433 NEK2P51955 445 aa11.29□□□□□ -0.6
BEND3-202ENST00000429433 POLGP54098 1239 aaPredicted RBP11.29□□□□□ -0.6
BEND3-202ENST00000429433 MKRN4PQ13434 485 aaPredicted RBP11.29□□□□□ -0.6
BEND3-202ENST00000429433 CCDC92Q53HC0 331 aaPredicted RBP11.29□□□□□ -0.6
BEND3-202ENST00000429433 PARP9Q8IXQ6 854 aa11.29□□□□□ -0.6
BEND3-202ENST00000429433 PROM2Q8N271 834 aa11.29□□□□□ -0.6
BEND3-202ENST00000429433 ZBTB38Q8NAP3 1195 aaPredicted RBP11.29□□□□□ -0.6
BEND3-202ENST00000429433 PDLIM2Q96JY6 352 aa11.29□□□□□ -0.6
BEND3-202ENST00000429433 USP40Q9NVE5 1235 aa11.29□□□□□ -0.6
BEND3-202ENST00000429433 ARHGEF37A1IGU5 675 aa11.28□□□□□ -0.6
BEND3-202ENST00000429433 FAM187AA6NFU0 413 aa11.28□□□□□ -0.6
BEND3-202ENST00000429433 COPEO14579 308 aa11.28□□□□□ -0.6
BEND3-202ENST00000429433 PLS3P13797 630 aa11.28□□□□□ -0.6
BEND3-202ENST00000429433 CASP2P42575 452 aa11.28□□□□□ -0.6
BEND3-202ENST00000429433 IGBP1P78318 339 aa11.28□□□□□ -0.6
BEND3-202ENST00000429433 TRIP13Q15645 432 aaPredicted RBP11.28□□□□□ -0.6
BEND3-202ENST00000429433 C16orf87Q6PH81 154 aa11.28□□□□□ -0.6
BEND3-202ENST00000429433 MAML1Q92585 1016 aa11.28□□□□□ -0.6
BEND3-202ENST00000429433 ZFP69BQ9UJL9 534 aa11.28□□□□□ -0.6
BEND3-202ENST00000429433 TRPC5Q9UL62 973 aaPredicted RBP11.28□□□□□ -0.6
BEND3-202ENST00000429433 PCDHA1Q9Y5I3 950 aa11.28□□□□□ -0.6
BEND3-202ENST00000429433 TESPA1A2RU30 521 aaPredicted RBP11.28□□□□□ -0.6
BEND3-202ENST00000429433 MXI1P50539 228 aa11.28□□□□□ -0.6
BEND3-202ENST00000429433 DYNLL1P63167 89 aaKnown RBP11.28□□□□□ -0.6
BEND3-202ENST00000429433 NOP14P78316 857 aaKnown RBP11.28□□□□□ -0.6
BEND3-202ENST00000429433 NBPF20Q3BBV1 942 aa11.28□□□□□ -0.6
BEND3-202ENST00000429433 RPS6KC1Q96S38 1066 aa11.28□□□□□ -0.6
BEND3-202ENST00000429433 ZBTB18Q99592 522 aa11.28□□□□□ -0.6
BEND3-202ENST00000429433 EMILIN3Q9NT22 766 aa11.28□□□□□ -0.6
BEND3-202ENST00000429433 ATG3Q9NT62 314 aa11.28□□□□□ -0.6
BEND3-202ENST00000429433 SYF2O95926 243 aaKnown RBP11.28□□□□□ -0.6
BEND3-202ENST00000429433 SERPINB2P05120 415 aa11.28□□□□□ -0.6
BEND3-202ENST00000429433 CCDC144BQ3MJ40 725 aa11.28□□□□□ -0.6
BEND3-202ENST00000429433 BBS9Q3SYG4 887 aa11.28□□□□□ -0.6
BEND3-202ENST00000429433 TOGARAM2Q6ZUX3 1019 aa11.28□□□□□ -0.6
BEND3-202ENST00000429433 VIPAS39Q9H9C1 493 aa11.28□□□□□ -0.6
BEND3-202ENST00000429433 MEIS1O00470 390 aa11.28□□□□□ -0.6
BEND3-202ENST00000429433 ZBTB24O43167 697 aaPredicted RBP11.28□□□□□ -0.6
BEND3-202ENST00000429433 TJP3O95049 919 aa11.28□□□□□ -0.6
BEND3-202ENST00000429433 KRT31Q15323 416 aa11.28□□□□□ -0.6
BEND3-202ENST00000429433 GDAP1Q8TB36 358 aa11.28□□□□□ -0.6
BEND3-202ENST00000429433 CPVLQ9H3G5 476 aa11.28□□□□□ -0.6
BEND3-202ENST00000429433 CEP72Q9P209 647 aa11.28□□□□□ -0.6
BEND3-202ENST00000429433 KRT4P19013 534 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms