RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 CAND2O75155 1236 aa20.97■□□□□ 0.95
PSPC1-202ENST00000427943 FAM86B2P0C5J1 330 aa20.97■□□□□ 0.95
PSPC1-202ENST00000427943 IFNAR1P17181 557 aa20.97■□□□□ 0.95
PSPC1-202ENST00000427943 EVCP57679 992 aa20.97■□□□□ 0.95
PSPC1-202ENST00000427943 ACTR2P61160 394 aa20.97■□□□□ 0.95
PSPC1-202ENST00000427943 IGBP1P78318 339 aa20.97■□□□□ 0.95
PSPC1-202ENST00000427943 TAP1Q03518 808 aa20.97■□□□□ 0.95
PSPC1-202ENST00000427943 CCDC85BQ15834 202 aaPredicted RBP20.97■□□□□ 0.95
PSPC1-202ENST00000427943 PLEKHG4Q58EX7 1191 aa20.97■□□□□ 0.95
PSPC1-202ENST00000427943 FAM117BQ6P1L5 589 aa20.97■□□□□ 0.95
PSPC1-202ENST00000427943 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.97■□□□□ 0.95
PSPC1-202ENST00000427943 PLA2G4DQ86XP0 818 aa20.97■□□□□ 0.95
PSPC1-202ENST00000427943 ZBTB10Q96DT7 871 aa20.97■□□□□ 0.95
PSPC1-202ENST00000427943 VPS54Q9P1Q0 977 aa20.97■□□□□ 0.95
PSPC1-202ENST00000427943 TUBE1Q9UJT0 475 aa20.97■□□□□ 0.95
PSPC1-202ENST00000427943 EVPLQ92817 2033 aa20.97■□□□□ 0.95
PSPC1-202ENST00000427943 EPOPA6NHQ4 379 aa20.96■□□□□ 0.95
PSPC1-202ENST00000427943 EFCAB14O75071 495 aa20.96■□□□□ 0.95
PSPC1-202ENST00000427943 MICALL1Q8N3F8 863 aa20.96■□□□□ 0.95
PSPC1-202ENST00000427943 CRYGNQ8WXF5 182 aa20.96■□□□□ 0.95
PSPC1-202ENST00000427943 ARNTL2Q8WYA1 636 aa20.96■□□□□ 0.95
PSPC1-202ENST00000427943 AZI2Q9H6S1 392 aa20.96■□□□□ 0.95
PSPC1-202ENST00000427943 PRRC2BQ5JSZ5 2229 aaKnown RBP20.95■□□□□ 0.94
PSPC1-202ENST00000427943 IGLV3-22A0A075B6J6 115 aa20.95■□□□□ 0.94
PSPC1-202ENST00000427943 GJB5O95377 273 aa20.95■□□□□ 0.94
PSPC1-202ENST00000427943 STK3Q13188 491 aa20.95■□□□□ 0.94
PSPC1-202ENST00000427943 NIPA1Q7RTP0 329 aa20.95■□□□□ 0.94
PSPC1-202ENST00000427943 CCDC148Q8NFR7 591 aa20.95■□□□□ 0.94
PSPC1-202ENST00000427943 COL25A1Q9BXS0 654 aaPredicted RBP20.95■□□□□ 0.94
PSPC1-202ENST00000427943 TM6SF1Q9BZW5 370 aa20.95■□□□□ 0.94
PSPC1-202ENST00000427943 TRPC6Q9Y210 931 aa20.95■□□□□ 0.94
PSPC1-202ENST00000427943 CUL9Q8IWT3 2517 aa20.94■□□□□ 0.94
PSPC1-202ENST00000427943 CCNE2O96020 404 aa20.94■□□□□ 0.94
PSPC1-202ENST00000427943 INSRRP14616 1297 aa20.94■□□□□ 0.94
PSPC1-202ENST00000427943 GNA11P29992 359 aa20.94■□□□□ 0.94
PSPC1-202ENST00000427943 MKRN4PQ13434 485 aaPredicted RBP20.94■□□□□ 0.94
PSPC1-202ENST00000427943 FAM26DQ5JW98 314 aa20.94■□□□□ 0.94
PSPC1-202ENST00000427943 MARCH8Q5T0T0 291 aa20.94■□□□□ 0.94
PSPC1-202ENST00000427943 MYOCDQ8IZQ8 938 aa20.94■□□□□ 0.94
PSPC1-202ENST00000427943 TRAPPC12Q8WVT3 735 aa20.94■□□□□ 0.94
PSPC1-202ENST00000427943 SEPT8Q92599 483 aa20.94■□□□□ 0.94
PSPC1-202ENST00000427943 MBLAC1A4D2B0 266 aaPredicted RBP20.93■□□□□ 0.94
PSPC1-202ENST00000427943 CHRNA1P02708 482 aa20.93■□□□□ 0.94
PSPC1-202ENST00000427943 AMHP03971 560 aa20.93■□□□□ 0.94
PSPC1-202ENST00000427943 CYP3A4P08684 503 aa20.93■□□□□ 0.94
PSPC1-202ENST00000427943 STAT5BP51692 787 aa20.93■□□□□ 0.94
PSPC1-202ENST00000427943 PLCB4Q15147 1175 aa20.93■□□□□ 0.94
PSPC1-202ENST00000427943 MCTP2Q6DN12 878 aa20.93■□□□□ 0.94
PSPC1-202ENST00000427943 TAF2Q6P1X5 1199 aa20.93■□□□□ 0.94
PSPC1-202ENST00000427943 DNAJB3Q8WWF6 145 aa20.93■□□□□ 0.94
PSPC1-202ENST00000427943 PDRG1Q9NUG6 133 aa20.93■□□□□ 0.94
PSPC1-202ENST00000427943 CPLX1O14810 134 aa20.92■□□□□ 0.94
PSPC1-202ENST00000427943 GHRP10912 638 aa20.92■□□□□ 0.94
PSPC1-202ENST00000427943 SSRP1Q08945 709 aaKnown RBP20.92■□□□□ 0.94
PSPC1-202ENST00000427943 MGAT3Q09327 533 aa20.92■□□□□ 0.94
PSPC1-202ENST00000427943 TRIM22Q8IYM9 498 aa20.92■□□□□ 0.94
PSPC1-202ENST00000427943 BICD2Q8TD16 824 aa20.92■□□□□ 0.94
PSPC1-202ENST00000427943 RAD9AQ99638 391 aa20.92■□□□□ 0.94
PSPC1-202ENST00000427943 ZNF577Q9BSK1 485 aa20.92■□□□□ 0.94
PSPC1-202ENST00000427943 IFIH1Q9BYX4 1025 aaKnown RBP20.92■□□□□ 0.94
PSPC1-202ENST00000427943 FAM49AQ9H0Q0 323 aaPredicted RBP20.92■□□□□ 0.94
PSPC1-202ENST00000427943 RALGAPA2Q2PPJ7 1873 aa20.92■□□□□ 0.94
PSPC1-202ENST00000427943 RRN3P2A6NIE6 340 aa20.91■□□□□ 0.94
PSPC1-202ENST00000427943 IPO5O00410 1097 aaKnown RBP20.91■□□□□ 0.94
PSPC1-202ENST00000427943 BACH1O14867 736 aa20.91■□□□□ 0.94
PSPC1-202ENST00000427943 DHX15O43143 795 aaKnown RBP20.91■□□□□ 0.94
PSPC1-202ENST00000427943 ATG7O95352 703 aa20.91■□□□□ 0.94
PSPC1-202ENST00000427943 NLRP5P59047 1200 aa20.91■□□□□ 0.94
PSPC1-202ENST00000427943 SETQ01105 290 aaPredicted RBP20.91■□□□□ 0.94
PSPC1-202ENST00000427943 PRR16Q569H4 304 aa20.91■□□□□ 0.94
PSPC1-202ENST00000427943 ERICH6BQ5W0A0 696 aa20.91■□□□□ 0.94
PSPC1-202ENST00000427943 KRT40Q6A162 431 aa20.91■□□□□ 0.94
PSPC1-202ENST00000427943 PLPPR4Q7Z2D5 763 aa20.91■□□□□ 0.94
PSPC1-202ENST00000427943 RPAINQ86UA6 219 aa20.91■□□□□ 0.94
PSPC1-202ENST00000427943 RSPH3Q86UC2 560 aa20.91■□□□□ 0.94
PSPC1-202ENST00000427943 CCDC60Q8IWA6 550 aaPredicted RBP20.91■□□□□ 0.94
PSPC1-202ENST00000427943 ZNF274Q96GC6 653 aaPredicted RBP20.91■□□□□ 0.94
PSPC1-202ENST00000427943 MTUS1Q9ULD2 1270 aa20.91■□□□□ 0.94
PSPC1-202ENST00000427943 CDY2AQ9Y6F7 541 aa20.91■□□□□ 0.94
PSPC1-202ENST00000427943 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.9■□□□□ 0.94
PSPC1-202ENST00000427943 LINC01553A4QN01 128 aa20.9■□□□□ 0.94
PSPC1-202ENST00000427943 ABHD15Q6UXT9 468 aa20.9■□□□□ 0.94
PSPC1-202ENST00000427943 GDPD5Q8WTR4 605 aa20.9■□□□□ 0.94
PSPC1-202ENST00000427943 AIFM3Q96NN9 605 aa20.9■□□□□ 0.94
PSPC1-202ENST00000427943 MTCH2Q9Y6C9 303 aa20.9■□□□□ 0.94
PSPC1-202ENST00000427943 IGKV6D-21A0A0A0MT36 114 aa20.89■□□□□ 0.93
PSPC1-202ENST00000427943 POTEB3A0JP26 581 aa20.89■□□□□ 0.93
PSPC1-202ENST00000427943 GTPBP6O43824 516 aaPredicted RBP20.89■□□□□ 0.93
PSPC1-202ENST00000427943 UPP2O95045 317 aa20.89■□□□□ 0.93
PSPC1-202ENST00000427943 MRPS6P82932 125 aaKnown RBP20.89■□□□□ 0.93
PSPC1-202ENST00000427943 GRB10Q13322 594 aa20.89■□□□□ 0.93
PSPC1-202ENST00000427943 LPIN1Q14693 890 aa20.89■□□□□ 0.93
PSPC1-202ENST00000427943 POTEBQ6S5H4 581 aa20.89■□□□□ 0.93
PSPC1-202ENST00000427943 APBB2Q92870 758 aa20.89■□□□□ 0.93
PSPC1-202ENST00000427943 ZNF302Q9NR11 478 aa20.89■□□□□ 0.93
PSPC1-202ENST00000427943 SH3GLB2Q9NR46 395 aa20.89■□□□□ 0.93
PSPC1-202ENST00000427943 THEGQ9P2T0 379 aa20.89■□□□□ 0.93
PSPC1-202ENST00000427943 DTNBO60941 627 aa20.88■□□□□ 0.93
PSPC1-202ENST00000427943 DEXIO95424 95 aa20.88■□□□□ 0.93
PSPC1-202ENST00000427943 CIITAP33076 1130 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms