RNA–Protein interactions for RNA: ENST00000427417.1

COMMD1-202, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-202ENST00000427417 CPLX1O14810 134 aa11.58□□□□□ -0.56
COMMD1-202ENST00000427417 GJB5O95377 273 aa11.58□□□□□ -0.56
COMMD1-202ENST00000427417 AMHP03971 560 aa11.58□□□□□ -0.56
COMMD1-202ENST00000427417 CENPBP07199 599 aaPredicted RBP11.58□□□□□ -0.56
COMMD1-202ENST00000427417 CTSHP09668 335 aa11.58□□□□□ -0.56
COMMD1-202ENST00000427417 ARP10275 920 aa11.58□□□□□ -0.56
COMMD1-202ENST00000427417 ACTR2P61160 394 aa11.58□□□□□ -0.56
COMMD1-202ENST00000427417 TOB2Q14106 344 aaPredicted RBP11.58□□□□□ -0.56
COMMD1-202ENST00000427417 NTRK3Q16288 839 aa11.58□□□□□ -0.56
COMMD1-202ENST00000427417 PKN1Q16512 942 aa11.58□□□□□ -0.56
COMMD1-202ENST00000427417 PLEKHG4Q58EX7 1191 aa11.58□□□□□ -0.56
COMMD1-202ENST00000427417 KRT40Q6A162 431 aa11.58□□□□□ -0.56
COMMD1-202ENST00000427417 PLPPR4Q7Z2D5 763 aa11.58□□□□□ -0.56
COMMD1-202ENST00000427417 RPAINQ86UA6 219 aa11.58□□□□□ -0.56
COMMD1-202ENST00000427417 PLA2G4DQ86XP0 818 aa11.58□□□□□ -0.56
COMMD1-202ENST00000427417 DBF4BQ8NFT6 615 aa11.58□□□□□ -0.56
COMMD1-202ENST00000427417 APBB2Q92870 758 aa11.58□□□□□ -0.56
COMMD1-202ENST00000427417 RAD9AQ99638 391 aa11.58□□□□□ -0.56
COMMD1-202ENST00000427417 OSBPL7Q9BZF2 842 aa11.58□□□□□ -0.56
COMMD1-202ENST00000427417 SH3GLB2Q9NR46 395 aa11.58□□□□□ -0.56
COMMD1-202ENST00000427417 TCEAL9Q9UHQ7 104 aa11.58□□□□□ -0.56
COMMD1-202ENST00000427417 TUBE1Q9UJT0 475 aa11.58□□□□□ -0.56
COMMD1-202ENST00000427417 CHD7Q9P2D1 2997 aa11.58□□□□□ -0.56
COMMD1-202ENST00000427417 PRRC2BQ5JSZ5 2229 aaKnown RBP11.58□□□□□ -0.56
COMMD1-202ENST00000427417 CHD9Q3L8U1 2897 aa11.57□□□□□ -0.56
COMMD1-202ENST00000427417 MBLAC1A4D2B0 266 aaPredicted RBP11.57□□□□□ -0.56
COMMD1-202ENST00000427417 FAM86B1E9PN63 330 aa11.57□□□□□ -0.56
COMMD1-202ENST00000427417 GTPBP6O43824 516 aaPredicted RBP11.57□□□□□ -0.56
COMMD1-202ENST00000427417 FAM86B2P0C5J1 330 aa11.57□□□□□ -0.56
COMMD1-202ENST00000427417 STAT5BP51692 787 aa11.57□□□□□ -0.56
COMMD1-202ENST00000427417 NLRP5P59047 1200 aa11.57□□□□□ -0.56
COMMD1-202ENST00000427417 TAP1Q03518 808 aa11.57□□□□□ -0.56
COMMD1-202ENST00000427417 SSRP1Q08945 709 aaKnown RBP11.57□□□□□ -0.56
COMMD1-202ENST00000427417 ITGB3BPQ13352 177 aaPredicted RBP11.57□□□□□ -0.56
COMMD1-202ENST00000427417 FAM26DQ5JW98 314 aa11.57□□□□□ -0.56
COMMD1-202ENST00000427417 FAM160B1Q5W0V3 765 aa11.57□□□□□ -0.56
COMMD1-202ENST00000427417 FAM117BQ6P1L5 589 aa11.57□□□□□ -0.56
COMMD1-202ENST00000427417 FAM177A1Q8N128 213 aaPredicted RBP11.57□□□□□ -0.56
COMMD1-202ENST00000427417 ARNTL2Q8WYA1 636 aa11.57□□□□□ -0.56
COMMD1-202ENST00000427417 C22orf23Q9BZE7 217 aa11.57□□□□□ -0.56
COMMD1-202ENST00000427417 TSPYL2Q9H2G4 693 aaPredicted RBP11.57□□□□□ -0.56
COMMD1-202ENST00000427417 TBC1D22BQ9NU19 505 aa11.57□□□□□ -0.56
COMMD1-202ENST00000427417 PDRG1Q9NUG6 133 aa11.57□□□□□ -0.56
COMMD1-202ENST00000427417 TRPC6Q9Y210 931 aa11.57□□□□□ -0.56
COMMD1-202ENST00000427417 COL4A4P53420 1690 aaPredicted RBP11.56□□□□□ -0.56
COMMD1-202ENST00000427417 M0QZ92 97 aa11.56□□□□□ -0.56
COMMD1-202ENST00000427417 IPO5O00410 1097 aaKnown RBP11.56□□□□□ -0.56
COMMD1-202ENST00000427417 CDKL5O76039 1030 aa11.56□□□□□ -0.56
COMMD1-202ENST00000427417 ATG7O95352 703 aa11.56□□□□□ -0.56
COMMD1-202ENST00000427417 DEXIO95424 95 aa11.56□□□□□ -0.56
COMMD1-202ENST00000427417 ANAPC15P60006 121 aa11.56□□□□□ -0.56
COMMD1-202ENST00000427417 MIS18BP1Q6P0N0 1132 aa11.56□□□□□ -0.56
COMMD1-202ENST00000427417 MICAL3Q7RTP6 2002 aa11.56□□□□□ -0.56
COMMD1-202ENST00000427417 MYOCDQ8IZQ8 938 aa11.56□□□□□ -0.56
COMMD1-202ENST00000427417 CRYGNQ8WXF5 182 aa11.56□□□□□ -0.56
COMMD1-202ENST00000427417 SYMPKQ92797 1274 aaKnown RBP11.56□□□□□ -0.56
COMMD1-202ENST00000427417 ZNF577Q9BSK1 485 aa11.56□□□□□ -0.56
COMMD1-202ENST00000427417 IFIH1Q9BYX4 1025 aaKnown RBP11.56□□□□□ -0.56
COMMD1-202ENST00000427417 UPF3BQ9BZI7 483 aaKnown RBP11.56□□□□□ -0.56
COMMD1-202ENST00000427417 NCOA5Q9HCD5 579 aaKnown RBP11.56□□□□□ -0.56
COMMD1-202ENST00000427417 VPS54Q9P1Q0 977 aa11.56□□□□□ -0.56
COMMD1-202ENST00000427417 INSL6Q9Y581 213 aa11.56□□□□□ -0.56
COMMD1-202ENST00000427417 SPTBN5Q9NRC6 3674 aaKnown RBP11.56□□□□□ -0.56
COMMD1-202ENST00000427417 KAT6AQ92794 2004 aa11.55□□□□□ -0.56
COMMD1-202ENST00000427417 IGLV3-22A0A075B6J6 115 aa11.55□□□□□ -0.56
COMMD1-202ENST00000427417 IGKV6D-21A0A0A0MT36 114 aa11.55□□□□□ -0.56
COMMD1-202ENST00000427417 POTEB3A0JP26 581 aa11.55□□□□□ -0.56
COMMD1-202ENST00000427417 DDX39AO00148 427 aaKnown RBP11.55□□□□□ -0.56
COMMD1-202ENST00000427417 BACH1O14867 736 aa11.55□□□□□ -0.56
COMMD1-202ENST00000427417 ADAMTS3O15072 1205 aa11.55□□□□□ -0.56
COMMD1-202ENST00000427417 INSRRP14616 1297 aa11.55□□□□□ -0.56
COMMD1-202ENST00000427417 POU3F3P20264 500 aaPredicted RBP11.55□□□□□ -0.56
COMMD1-202ENST00000427417 CIITAP33076 1130 aa11.55□□□□□ -0.56
COMMD1-202ENST00000427417 USP11P51784 963 aa11.55□□□□□ -0.56
COMMD1-202ENST00000427417 IGBP1P78318 339 aa11.55□□□□□ -0.56
COMMD1-202ENST00000427417 KRT76Q01546 638 aa11.55□□□□□ -0.56
COMMD1-202ENST00000427417 PLCB4Q15147 1175 aa11.55□□□□□ -0.56
COMMD1-202ENST00000427417 ANKRD1Q15327 319 aa11.55□□□□□ -0.56
COMMD1-202ENST00000427417 MARCH8Q5T0T0 291 aa11.55□□□□□ -0.56
COMMD1-202ENST00000427417 IER5Q5VY09 327 aa11.55□□□□□ -0.56
COMMD1-202ENST00000427417 GALNT17Q6IS24 598 aa11.55□□□□□ -0.56
COMMD1-202ENST00000427417 ZNF746Q6NUN9 644 aaPredicted RBP11.55□□□□□ -0.56
COMMD1-202ENST00000427417 POTEBQ6S5H4 581 aa11.55□□□□□ -0.56
COMMD1-202ENST00000427417 ABHD15Q6UXT9 468 aa11.55□□□□□ -0.56
COMMD1-202ENST00000427417 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.55□□□□□ -0.56
COMMD1-202ENST00000427417 RUFY4Q6ZNE9 571 aa11.55□□□□□ -0.56
COMMD1-202ENST00000427417 SMAP1Q8IYB5 467 aaPredicted RBP11.55□□□□□ -0.56
COMMD1-202ENST00000427417 DNAJB3Q8WWF6 145 aa11.55□□□□□ -0.56
COMMD1-202ENST00000427417 ZBTB10Q96DT7 871 aa11.55□□□□□ -0.56
COMMD1-202ENST00000427417 PCYT2Q99447 389 aa11.55□□□□□ -0.56
COMMD1-202ENST00000427417 ZNF302Q9NR11 478 aa11.55□□□□□ -0.56
COMMD1-202ENST00000427417 PCDHA2Q9Y5H9 948 aa11.55□□□□□ -0.56
COMMD1-202ENST00000427417 HBP1O60381 514 aa11.54□□□□□ -0.56
COMMD1-202ENST00000427417 PPFIA3O75145 1194 aa11.54□□□□□ -0.56
COMMD1-202ENST00000427417 CCNE2O96020 404 aa11.54□□□□□ -0.56
COMMD1-202ENST00000427417 CHRNA1P02708 482 aa11.54□□□□□ -0.56
COMMD1-202ENST00000427417 XBP1P17861 261 aa11.54□□□□□ -0.56
COMMD1-202ENST00000427417 MGAT3Q09327 533 aa11.54□□□□□ -0.56
COMMD1-202ENST00000427417 STK3Q13188 491 aa11.54□□□□□ -0.56
COMMD1-202ENST00000427417 MKRN4PQ13434 485 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms