RNA–Protein interactions for RNA: ENST00000427007.5

HDLBP-213, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-213ENST00000427007 NAPAP54920 295 aa11.69□□□□□ -0.54
HDLBP-213ENST00000427007 TMEM62Q0P6H9 643 aa11.69□□□□□ -0.54
HDLBP-213ENST00000427007 TIGD5Q53EQ6 642 aa11.69□□□□□ -0.54
HDLBP-213ENST00000427007 TCEAL5Q5H9L2 206 aa11.69□□□□□ -0.54
HDLBP-213ENST00000427007 PTCRAQ6ISU1 281 aaPredicted RBP11.69□□□□□ -0.54
HDLBP-213ENST00000427007 TYW1BQ6NUM6 668 aa11.69□□□□□ -0.54
HDLBP-213ENST00000427007 SYNE3Q6ZMZ3 975 aa11.69□□□□□ -0.54
HDLBP-213ENST00000427007 RPAINQ86UA6 219 aa11.69□□□□□ -0.54
HDLBP-213ENST00000427007 RSPH3Q86UC2 560 aa11.69□□□□□ -0.54
HDLBP-213ENST00000427007 SGMS1Q86VZ5 419 aa11.69□□□□□ -0.54
HDLBP-213ENST00000427007 CYP2W1Q8TAV3 490 aa11.69□□□□□ -0.54
HDLBP-213ENST00000427007 PCYT2Q99447 389 aa11.69□□□□□ -0.54
HDLBP-213ENST00000427007 MXRA8Q9BRK3 442 aa11.69□□□□□ -0.54
HDLBP-213ENST00000427007 LRFN3Q9BTN0 628 aa11.69□□□□□ -0.54
HDLBP-213ENST00000427007 FAM49AQ9H0Q0 323 aaPredicted RBP11.69□□□□□ -0.54
HDLBP-213ENST00000427007 JPH1Q9HDC5 661 aaPredicted RBP11.69□□□□□ -0.54
HDLBP-213ENST00000427007 SLC9A2Q9UBY0 812 aa11.69□□□□□ -0.54
HDLBP-213ENST00000427007 TRPC6Q9Y210 931 aa11.69□□□□□ -0.54
HDLBP-213ENST00000427007 ADGRA3Q8IWK6 1321 aa11.68□□□□□ -0.54
HDLBP-213ENST00000427007 MBLAC1A4D2B0 266 aaPredicted RBP11.68□□□□□ -0.54
HDLBP-213ENST00000427007 ENPP3O14638 875 aa11.68□□□□□ -0.54
HDLBP-213ENST00000427007 MAFGO15525 162 aa11.68□□□□□ -0.54
HDLBP-213ENST00000427007 ARP10275 920 aa11.68□□□□□ -0.54
HDLBP-213ENST00000427007 INSRRP14616 1297 aa11.68□□□□□ -0.54
HDLBP-213ENST00000427007 MRPS6P82932 125 aaKnown RBP11.68□□□□□ -0.54
HDLBP-213ENST00000427007 TMEM31Q5JXX7 168 aa11.68□□□□□ -0.54
HDLBP-213ENST00000427007 FBXO47Q5MNV8 452 aa11.68□□□□□ -0.54
HDLBP-213ENST00000427007 APOA5Q6Q788 366 aa11.68□□□□□ -0.54
HDLBP-213ENST00000427007 TSHZ1Q6ZSZ6 1077 aa11.68□□□□□ -0.54
HDLBP-213ENST00000427007 FAM178BQ8IXR5 827 aa11.68□□□□□ -0.54
HDLBP-213ENST00000427007 TRAPPC12Q8WVT3 735 aa11.68□□□□□ -0.54
HDLBP-213ENST00000427007 NEK1Q96PY6 1258 aa11.68□□□□□ -0.54
HDLBP-213ENST00000427007 NSUN3Q9H649 340 aaKnown RBP11.68□□□□□ -0.54
HDLBP-213ENST00000427007 AZI2Q9H6S1 392 aa11.68□□□□□ -0.54
HDLBP-213ENST00000427007 AGO3Q9H9G7 860 aaKnown RBP11.68□□□□□ -0.54
HDLBP-213ENST00000427007 KCNH7Q9NS40 1196 aa11.68□□□□□ -0.54
HDLBP-213ENST00000427007 TMEM260Q9NX78 707 aa11.68□□□□□ -0.54
HDLBP-213ENST00000427007 GRXCR2A6NFK2 248 aa11.67□□□□□ -0.54
HDLBP-213ENST00000427007 DDX39AO00148 427 aaKnown RBP11.67□□□□□ -0.54
HDLBP-213ENST00000427007 GRM6O15303 877 aa11.67□□□□□ -0.54
HDLBP-213ENST00000427007 LINC00271P0C7V0 271 aa11.67□□□□□ -0.54
HDLBP-213ENST00000427007 CD52P31358 61 aa11.67□□□□□ -0.54
HDLBP-213ENST00000427007 SSTR3P32745 418 aaPredicted RBP11.67□□□□□ -0.54
HDLBP-213ENST00000427007 ADCY7P51828 1080 aa11.67□□□□□ -0.54
HDLBP-213ENST00000427007 ACTR2P61160 394 aa11.67□□□□□ -0.54
HDLBP-213ENST00000427007 BTG3Q14201 252 aaPredicted RBP11.67□□□□□ -0.54
HDLBP-213ENST00000427007 PLCB4Q15147 1175 aa11.67□□□□□ -0.54
HDLBP-213ENST00000427007 RTN1Q16799 776 aa11.67□□□□□ -0.54
HDLBP-213ENST00000427007 RNF20Q5VTR2 975 aa11.67□□□□□ -0.54
HDLBP-213ENST00000427007 NEK9Q8TD19 979 aa11.67□□□□□ -0.54
HDLBP-213ENST00000427007 LINC01599Q8WXQ3 324 aa11.67□□□□□ -0.54
HDLBP-213ENST00000427007 PABPC5Q96DU9 382 aaKnown RBP11.67□□□□□ -0.54
HDLBP-213ENST00000427007 SDF4Q9BRK5 362 aa11.67□□□□□ -0.54
HDLBP-213ENST00000427007 ANO3Q9BYT9 981 aa11.67□□□□□ -0.54
HDLBP-213ENST00000427007 RC3H2Q9HBD1 1191 aaKnown RBP11.67□□□□□ -0.54
HDLBP-213ENST00000427007 RIC8AQ9NPQ8 531 aa11.67□□□□□ -0.54
HDLBP-213ENST00000427007 C11orf16Q9NQ32 467 aa11.67□□□□□ -0.54
HDLBP-213ENST00000427007 RBM28Q9NW13 759 aaKnown RBP11.67□□□□□ -0.54
HDLBP-213ENST00000427007 CLDND1Q9NY35 253 aa11.67□□□□□ -0.54
HDLBP-213ENST00000427007 BRPF3Q9ULD4 1205 aa11.67□□□□□ -0.54
HDLBP-213ENST00000427007 NFASCO94856 1347 aa11.66□□□□□ -0.54
HDLBP-213ENST00000427007 SMCO2A6NFE2 343 aa11.66□□□□□ -0.54
HDLBP-213ENST00000427007 RRN3P2A6NIE6 340 aa11.66□□□□□ -0.54
HDLBP-213ENST00000427007 GOLGA8AA7E2F4 631 aa11.66□□□□□ -0.54
HDLBP-213ENST00000427007 GOLGA8BA8MQT2 603 aa11.66□□□□□ -0.54
HDLBP-213ENST00000427007 C5orf67F2Z3F1 127 aa11.66□□□□□ -0.54
HDLBP-213ENST00000427007 M0QZ92 97 aa11.66□□□□□ -0.54
HDLBP-213ENST00000427007 STXBP3O00186 592 aa11.66□□□□□ -0.54
HDLBP-213ENST00000427007 ZBTB43O43298 467 aa11.66□□□□□ -0.54
HDLBP-213ENST00000427007 IBSPP21815 317 aaPredicted RBP11.66□□□□□ -0.54
HDLBP-213ENST00000427007 BMPR1AP36894 532 aa11.66□□□□□ -0.54
HDLBP-213ENST00000427007 PLA2G5P39877 138 aa11.66□□□□□ -0.54
HDLBP-213ENST00000427007 STAT5BP51692 787 aa11.66□□□□□ -0.54
HDLBP-213ENST00000427007 ITGB3BPQ13352 177 aaPredicted RBP11.66□□□□□ -0.54
HDLBP-213ENST00000427007 ADCK5Q3MIX3 580 aa11.66□□□□□ -0.54
HDLBP-213ENST00000427007 IER5Q5VY09 327 aa11.66□□□□□ -0.54
HDLBP-213ENST00000427007 PPP1R18Q6NYC8 613 aa11.66□□□□□ -0.54
HDLBP-213ENST00000427007 RASEFQ8IZ41 740 aa11.66□□□□□ -0.54
HDLBP-213ENST00000427007 GJD3Q8N144 294 aa11.66□□□□□ -0.54
HDLBP-213ENST00000427007 ZNF689Q96CS4 500 aaPredicted RBP11.66□□□□□ -0.54
HDLBP-213ENST00000427007 FAM122AQ96E09 287 aa11.66□□□□□ -0.54
HDLBP-213ENST00000427007 UIMC1Q96RL1 719 aa11.66□□□□□ -0.54
HDLBP-213ENST00000427007 C11orf84Q9BUA3 381 aaPredicted RBP11.66□□□□□ -0.54
HDLBP-213ENST00000427007 AGO4Q9HCK5 861 aaKnown RBP11.66□□□□□ -0.54
HDLBP-213ENST00000427007 NAP1L2Q9ULW6 460 aaPredicted RBP11.66□□□□□ -0.54
HDLBP-213ENST00000427007 TRPV2Q9Y5S1 764 aa11.66□□□□□ -0.54
HDLBP-213ENST00000427007 V9GY48 417 aaPredicted RBP11.66□□□□□ -0.54
HDLBP-213ENST00000427007 NCOR1O75376 2440 aa11.65□□□□□ -0.54
HDLBP-213ENST00000427007 KLF18A0A0U1RQI7 1052 aa11.65□□□□□ -0.54
HDLBP-213ENST00000427007 POTEB3A0JP26 581 aa11.65□□□□□ -0.54
HDLBP-213ENST00000427007 PI4K2BG5E9Z4 385 aa11.65□□□□□ -0.54
HDLBP-213ENST00000427007 DGKIO75912 1065 aa11.65□□□□□ -0.54
HDLBP-213ENST00000427007 RB1P06400 928 aa11.65□□□□□ -0.54
HDLBP-213ENST00000427007 CDC27P30260 824 aa11.65□□□□□ -0.54
HDLBP-213ENST00000427007 ZNF76P36508 570 aa11.65□□□□□ -0.54
HDLBP-213ENST00000427007 EXOSC10Q01780 885 aaKnown RBP11.65□□□□□ -0.54
HDLBP-213ENST00000427007 FUT2Q10981 343 aa11.65□□□□□ -0.54
HDLBP-213ENST00000427007 CLUL1Q15846 466 aa11.65□□□□□ -0.54
HDLBP-213ENST00000427007 PAN2Q504Q3 1202 aaKnown RBP11.65□□□□□ -0.54
HDLBP-213ENST00000427007 CEP55Q53EZ4 464 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms