RNA–Protein interactions for RNA: ENST00000426962.1

LINC01238-202, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2

Gene LINC01238, Length 430 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-202ENST00000426962 MYOGP15173 224 aa12.23□□□□□ -0.45
LINC01238-202ENST00000426962 FOSL2P15408 326 aa12.23□□□□□ -0.45
LINC01238-202ENST00000426962 SLC26A2P50443 739 aa12.23□□□□□ -0.45
LINC01238-202ENST00000426962 WDR5P61964 334 aaKnown RBP12.23□□□□□ -0.45
LINC01238-202ENST00000426962 PRR16Q569H4 304 aa12.23□□□□□ -0.45
LINC01238-202ENST00000426962 FAM26DQ5JW98 314 aa12.23□□□□□ -0.45
LINC01238-202ENST00000426962 GALNT17Q6IS24 598 aa12.23□□□□□ -0.45
LINC01238-202ENST00000426962 TAF2Q6P1X5 1199 aa12.23□□□□□ -0.45
LINC01238-202ENST00000426962 ABHD15Q6UXT9 468 aa12.23□□□□□ -0.45
LINC01238-202ENST00000426962 RSPH3Q86UC2 560 aa12.23□□□□□ -0.45
LINC01238-202ENST00000426962 HERC6Q8IVU3 1022 aa12.23□□□□□ -0.45
LINC01238-202ENST00000426962 DBF4BQ8NFT6 615 aa12.23□□□□□ -0.45
LINC01238-202ENST00000426962 TPCN1Q9ULQ1 816 aa12.23□□□□□ -0.45
LINC01238-202ENST00000426962 DOCK5Q9H7D0 1870 aa12.23□□□□□ -0.45
LINC01238-202ENST00000426962 MBLAC1A4D2B0 266 aaPredicted RBP12.22□□□□□ -0.45
LINC01238-202ENST00000426962 DDX39AO00148 427 aaKnown RBP12.22□□□□□ -0.45
LINC01238-202ENST00000426962 EDIL3O43854 480 aa12.22□□□□□ -0.45
LINC01238-202ENST00000426962 SEC24BO95487 1268 aa12.22□□□□□ -0.45
LINC01238-202ENST00000426962 CCNE2O96020 404 aa12.22□□□□□ -0.45
LINC01238-202ENST00000426962 AK2P54819 239 aa12.22□□□□□ -0.45
LINC01238-202ENST00000426962 PLCB4Q15147 1175 aa12.22□□□□□ -0.45
LINC01238-202ENST00000426962 TCTN1Q2MV58 587 aa12.22□□□□□ -0.45
LINC01238-202ENST00000426962 PLEKHG4Q58EX7 1191 aa12.22□□□□□ -0.45
LINC01238-202ENST00000426962 MARCH8Q5T0T0 291 aa12.22□□□□□ -0.45
LINC01238-202ENST00000426962 PPP2R2DQ66LE6 453 aa12.22□□□□□ -0.45
LINC01238-202ENST00000426962 MIS18BP1Q6P0N0 1132 aa12.22□□□□□ -0.45
LINC01238-202ENST00000426962 BLIDQ8IZY5 108 aa12.22□□□□□ -0.45
LINC01238-202ENST00000426962 DAGLBQ8NCG7 672 aa12.22□□□□□ -0.45
LINC01238-202ENST00000426962 MAFAQ8NHW3 353 aaPredicted RBP12.22□□□□□ -0.45
LINC01238-202ENST00000426962 GAS2L1Q99501 681 aaPredicted RBP12.22□□□□□ -0.45
LINC01238-202ENST00000426962 TUBE1Q9UJT0 475 aa12.22□□□□□ -0.45
LINC01238-202ENST00000426962 TRPC6Q9Y210 931 aa12.22□□□□□ -0.45
LINC01238-202ENST00000426962 POTEB3A0JP26 581 aa12.21□□□□□ -0.45
LINC01238-202ENST00000426962 M0R2N6 131 aa12.21□□□□□ -0.45
LINC01238-202ENST00000426962 BACH1O14867 736 aa12.21□□□□□ -0.45
LINC01238-202ENST00000426962 TLL1O43897 1013 aa12.21□□□□□ -0.45
LINC01238-202ENST00000426962 HBP1O60381 514 aa12.21□□□□□ -0.45
LINC01238-202ENST00000426962 CHRNA1P02708 482 aa12.21□□□□□ -0.45
LINC01238-202ENST00000426962 RPLP2P05387 115 aaKnown RBP12.21□□□□□ -0.45
LINC01238-202ENST00000426962 CA3P07451 260 aa12.21□□□□□ -0.45
LINC01238-202ENST00000426962 CTSHP09668 335 aa12.21□□□□□ -0.45
LINC01238-202ENST00000426962 XBP1P17861 261 aa12.21□□□□□ -0.45
LINC01238-202ENST00000426962 NEK4P51957 841 aa12.21□□□□□ -0.45
LINC01238-202ENST00000426962 IGBP1P78318 339 aa12.21□□□□□ -0.45
LINC01238-202ENST00000426962 FAM160B1Q5W0V3 765 aa12.21□□□□□ -0.45
LINC01238-202ENST00000426962 ZNF746Q6NUN9 644 aaPredicted RBP12.21□□□□□ -0.45
LINC01238-202ENST00000426962 SWSAP1Q6NVH7 229 aa12.21□□□□□ -0.45
LINC01238-202ENST00000426962 POTEBQ6S5H4 581 aa12.21□□□□□ -0.45
LINC01238-202ENST00000426962 RUFY4Q6ZNE9 571 aa12.21□□□□□ -0.45
LINC01238-202ENST00000426962 SMAP1Q8IYB5 467 aaPredicted RBP12.21□□□□□ -0.45
LINC01238-202ENST00000426962 TET1Q8NFU7 2136 aa12.21□□□□□ -0.45
LINC01238-202ENST00000426962 TBCKQ8TEA7 893 aa12.21□□□□□ -0.45
LINC01238-202ENST00000426962 DNAJB3Q8WWF6 145 aa12.21□□□□□ -0.45
LINC01238-202ENST00000426962 SEPT8Q92599 483 aa12.21□□□□□ -0.45
LINC01238-202ENST00000426962 AIFM3Q96NN9 605 aa12.21□□□□□ -0.45
LINC01238-202ENST00000426962 UIMC1Q96RL1 719 aa12.21□□□□□ -0.45
LINC01238-202ENST00000426962 ZBED2Q9BTP6 218 aa12.21□□□□□ -0.45
LINC01238-202ENST00000426962 PRDM12Q9H4Q4 367 aa12.21□□□□□ -0.45
LINC01238-202ENST00000426962 ZNF302Q9NR11 478 aa12.21□□□□□ -0.45
LINC01238-202ENST00000426962 TCEAL9Q9UHQ7 104 aa12.21□□□□□ -0.45
LINC01238-202ENST00000426962 GJB5O95377 273 aa12.2□□□□□ -0.46
LINC01238-202ENST00000426962 DEFB103AP81534 67 aa12.2□□□□□ -0.46
LINC01238-202ENST00000426962 KRT76Q01546 638 aa12.2□□□□□ -0.46
LINC01238-202ENST00000426962 NPY5RQ15761 445 aa12.2□□□□□ -0.46
LINC01238-202ENST00000426962 Q4G0T1 1027 aa12.2□□□□□ -0.46
LINC01238-202ENST00000426962 PDXDC2PQ6P474 469 aa12.2□□□□□ -0.46
LINC01238-202ENST00000426962 APBB2Q92870 758 aa12.2□□□□□ -0.46
LINC01238-202ENST00000426962 LENG9Q96B70 501 aa12.2□□□□□ -0.46
LINC01238-202ENST00000426962 RIT2Q99578 217 aa12.2□□□□□ -0.46
LINC01238-202ENST00000426962 RAD9AQ99638 391 aa12.2□□□□□ -0.46
LINC01238-202ENST00000426962 OSBPL7Q9BZF2 842 aa12.2□□□□□ -0.46
LINC01238-202ENST00000426962 PCDHA2Q9Y5H9 948 aa12.2□□□□□ -0.46
LINC01238-202ENST00000426962 PCDHA10Q9Y5I2 948 aa12.2□□□□□ -0.46
LINC01238-202ENST00000426962 MAFBQ9Y5Q3 323 aaPredicted RBP12.2□□□□□ -0.46
LINC01238-202ENST00000426962 TANC1Q9C0D5 1861 aa12.2□□□□□ -0.46
LINC01238-202ENST00000426962 STK36Q9NRP7 1315 aa12.19□□□□□ -0.46
LINC01238-202ENST00000426962 CYP3A7-CYP3A51PA0A087WV96 503 aa12.19□□□□□ -0.46
LINC01238-202ENST00000426962 SMIM35A0A1B0GVV1 85 aa12.19□□□□□ -0.46
LINC01238-202ENST00000426962 MSH4O15457 936 aa12.19□□□□□ -0.46
LINC01238-202ENST00000426962 CTDNEP1O95476 244 aa12.19□□□□□ -0.46
LINC01238-202ENST00000426962 AMHP03971 560 aa12.19□□□□□ -0.46
LINC01238-202ENST00000426962 PSAPP07602 524 aa12.19□□□□□ -0.46
LINC01238-202ENST00000426962 CYP3A7P24462 503 aa12.19□□□□□ -0.46
LINC01238-202ENST00000426962 MGAT3Q09327 533 aa12.19□□□□□ -0.46
LINC01238-202ENST00000426962 MKRN4PQ13434 485 aaPredicted RBP12.19□□□□□ -0.46
LINC01238-202ENST00000426962 ME3Q16798 604 aa12.19□□□□□ -0.46
LINC01238-202ENST00000426962 IER5Q5VY09 327 aa12.19□□□□□ -0.46
LINC01238-202ENST00000426962 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.19□□□□□ -0.46
LINC01238-202ENST00000426962 KRT25Q7Z3Z0 450 aa12.19□□□□□ -0.46
LINC01238-202ENST00000426962 CCDC60Q8IWA6 550 aaPredicted RBP12.19□□□□□ -0.46
LINC01238-202ENST00000426962 NME8Q8N427 588 aa12.19□□□□□ -0.46
LINC01238-202ENST00000426962 ATP8B4Q8TF62 1192 aa12.19□□□□□ -0.46
LINC01238-202ENST00000426962 WASF1Q92558 559 aa12.19□□□□□ -0.46
LINC01238-202ENST00000426962 PHF20Q9BVI0 1012 aa12.19□□□□□ -0.46
LINC01238-202ENST00000426962 IFIH1Q9BYX4 1025 aaKnown RBP12.19□□□□□ -0.46
LINC01238-202ENST00000426962 ORC3Q9UBD5 711 aaPredicted RBP12.19□□□□□ -0.46
LINC01238-202ENST00000426962 KCNJ14Q9UNX9 436 aa12.19□□□□□ -0.46
LINC01238-202ENST00000426962 SAMM50Q9Y512 469 aa12.19□□□□□ -0.46
LINC01238-202ENST00000426962 KAT6AQ92794 2004 aa12.18□□□□□ -0.46
LINC01238-202ENST00000426962 ATP4AP20648 1035 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms