RNA–Protein interactions for RNA: ENST00000425533.1

SMIM27-201, Transcript of small integral membrane protein 27, humanhuman

TSL 2

Gene SMIM27, Length 903 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM27-201ENST00000425533 RTN4RL1Q86UN2 441 aaPredicted RBP11.13□□□□□ -0.63
SMIM27-201ENST00000425533 PLCD3Q8N3E9 789 aa11.13□□□□□ -0.63
SMIM27-201ENST00000425533 APPBP2Q92624 585 aa11.13□□□□□ -0.63
SMIM27-201ENST00000425533 KIF1BPQ96EK5 621 aa11.13□□□□□ -0.63
SMIM27-201ENST00000425533 SH2B1Q9NRF2 756 aaPredicted RBP11.13□□□□□ -0.63
SMIM27-201ENST00000425533 TMEM260Q9NX78 707 aa11.13□□□□□ -0.63
SMIM27-201ENST00000425533 FBXL21Q9UKT6 434 aa11.13□□□□□ -0.63
SMIM27-201ENST00000425533 CDV3Q9UKY7 258 aaKnown RBP11.13□□□□□ -0.63
SMIM27-201ENST00000425533 HIDE1A8MVS5 230 aa11.12□□□□□ -0.63
SMIM27-201ENST00000425533 PATL2C9JE40 543 aaKnown RBP11.12□□□□□ -0.63
SMIM27-201ENST00000425533 M0R2C6 588 aa11.12□□□□□ -0.63
SMIM27-201ENST00000425533 NR3C2P08235 984 aa11.12□□□□□ -0.63
SMIM27-201ENST00000425533 UBA1P22314 1058 aaKnown RBP11.12□□□□□ -0.63
SMIM27-201ENST00000425533 MTHFRP42898 656 aa11.12□□□□□ -0.63
SMIM27-201ENST00000425533 ARHGAP4P98171 946 aa11.12□□□□□ -0.63
SMIM27-201ENST00000425533 COL9A3Q14050 684 aaPredicted RBP11.12□□□□□ -0.63
SMIM27-201ENST00000425533 SPOUT1Q5T280 376 aaKnown RBP11.12□□□□□ -0.63
SMIM27-201ENST00000425533 RUFY4Q6ZNE9 571 aa11.12□□□□□ -0.63
SMIM27-201ENST00000425533 TSHZ1Q6ZSZ6 1077 aa11.12□□□□□ -0.63
SMIM27-201ENST00000425533 LMBR1Q8WVP7 490 aa11.12□□□□□ -0.63
SMIM27-201ENST00000425533 CASP10Q92851 521 aa11.12□□□□□ -0.63
SMIM27-201ENST00000425533 TCF25Q9BQ70 676 aa11.12□□□□□ -0.63
SMIM27-201ENST00000425533 RTKNQ9BST9 563 aa11.12□□□□□ -0.63
SMIM27-201ENST00000425533 MAF1Q9H063 256 aa11.12□□□□□ -0.63
SMIM27-201ENST00000425533 PXMP2Q9NR77 195 aa11.12□□□□□ -0.63
SMIM27-201ENST00000425533 RNF216Q9NWF9 866 aaPredicted RBP11.12□□□□□ -0.63
SMIM27-201ENST00000425533 NCDNQ9UBB6 729 aa11.12□□□□□ -0.63
SMIM27-201ENST00000425533 DUSP12Q9UNI6 340 aa11.12□□□□□ -0.63
SMIM27-201ENST00000425533 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.12□□□□□ -0.63
SMIM27-201ENST00000425533 CCDC171Q6TFL3 1326 aa11.11□□□□□ -0.63
SMIM27-201ENST00000425533 DOCK5Q9H7D0 1870 aa11.11□□□□□ -0.63
SMIM27-201ENST00000425533 PRR5-ARHGAP8B1AHC4 643 aa11.11□□□□□ -0.63
SMIM27-201ENST00000425533 STK25O00506 426 aa11.11□□□□□ -0.63
SMIM27-201ENST00000425533 STAG3L1P0CL83 205 aa11.11□□□□□ -0.63
SMIM27-201ENST00000425533 PDHBP11177 359 aa11.11□□□□□ -0.63
SMIM27-201ENST00000425533 CD52P31358 61 aa11.11□□□□□ -0.63
SMIM27-201ENST00000425533 ARHGAP8P85298 464 aa11.11□□□□□ -0.63
SMIM27-201ENST00000425533 TDGQ13569 410 aa11.11□□□□□ -0.63
SMIM27-201ENST00000425533 VARS2Q5ST30 1063 aaKnown RBP11.11□□□□□ -0.63
SMIM27-201ENST00000425533 ZKSCAN2Q63HK3 967 aa11.11□□□□□ -0.63
SMIM27-201ENST00000425533 KCNV1Q6PIU1 500 aa11.11□□□□□ -0.63
SMIM27-201ENST00000425533 ITPRIPQ8IWB1 547 aa11.11□□□□□ -0.63
SMIM27-201ENST00000425533 THNSL1Q8IYQ7 743 aa11.11□□□□□ -0.63
SMIM27-201ENST00000425533 BCAS3Q9H6U6 928 aa11.11□□□□□ -0.63
SMIM27-201ENST00000425533 AGO3Q9H9G7 860 aaKnown RBP11.11□□□□□ -0.63
SMIM27-201ENST00000425533 MLXIPQ9HAP2 919 aa11.11□□□□□ -0.63
SMIM27-201ENST00000425533 ENTPD7Q9NQZ7 604 aa11.11□□□□□ -0.63
SMIM27-201ENST00000425533 CYP26B1Q9NR63 512 aa11.11□□□□□ -0.63
SMIM27-201ENST00000425533 AAASQ9NRG9 546 aa11.11□□□□□ -0.63
SMIM27-201ENST00000425533 HCSTQ9UBK5 93 aa11.11□□□□□ -0.63
SMIM27-201ENST00000425533 DBR1Q9UK59 544 aaKnown RBP11.11□□□□□ -0.63
SMIM27-201ENST00000425533 USTQ9Y2C2 406 aa11.11□□□□□ -0.63
SMIM27-201ENST00000425533 HCFC2Q9Y5Z7 792 aa11.11□□□□□ -0.63
SMIM27-201ENST00000425533 SPTBN2O15020 2390 aa11.11□□□□□ -0.63
SMIM27-201ENST00000425533 LOXHD1Q8IVV2 1947 aa11.1□□□□□ -0.63
SMIM27-201ENST00000425533 KINO60870 393 aaKnown RBP11.1□□□□□ -0.63
SMIM27-201ENST00000425533 EOMESO95936 686 aa11.1□□□□□ -0.63
SMIM27-201ENST00000425533 SCG2P13521 617 aa11.1□□□□□ -0.63
SMIM27-201ENST00000425533 LMNB2Q03252 620 aa11.1□□□□□ -0.63
SMIM27-201ENST00000425533 CTDSPL2Q05D32 466 aa11.1□□□□□ -0.63
SMIM27-201ENST00000425533 TBC1D8BQ0IIM8 1120 aa11.1□□□□□ -0.63
SMIM27-201ENST00000425533 SPECC1Q5M775 1068 aa11.1□□□□□ -0.63
SMIM27-201ENST00000425533 TRIM50Q86XT4 487 aa11.1□□□□□ -0.63
SMIM27-201ENST00000425533 GPR161Q8N6U8 529 aaKnown RBP11.1□□□□□ -0.63
SMIM27-201ENST00000425533 COLGALT1Q8NBJ5 622 aa11.1□□□□□ -0.63
SMIM27-201ENST00000425533 GPKOWQ92917 476 aaPredicted RBP eCLIP11.1□□□□□ -0.63
SMIM27-201ENST00000425533 TMEM47Q9BQJ4 181 aa11.1□□□□□ -0.63
SMIM27-201ENST00000425533 USP26Q9BXU7 913 aa11.1□□□□□ -0.63
SMIM27-201ENST00000425533 FTHL17Q9BXU8 183 aa11.1□□□□□ -0.63
SMIM27-201ENST00000425533 NACAP1Q9BZK3 213 aa11.1□□□□□ -0.63
SMIM27-201ENST00000425533 NAPBQ9H115 298 aa11.1□□□□□ -0.63
SMIM27-201ENST00000425533 CDY2AQ9Y6F7 541 aa11.1□□□□□ -0.63
SMIM27-201ENST00000425533 ABCB11O95342 1321 aa11.09□□□□□ -0.63
SMIM27-201ENST00000425533 KRBA1A5PL33 1030 aa11.09□□□□□ -0.63
SMIM27-201ENST00000425533 RNF113AO15541 343 aaKnown RBP11.09□□□□□ -0.63
SMIM27-201ENST00000425533 NARSO43776 548 aaKnown RBP11.09□□□□□ -0.63
SMIM27-201ENST00000425533 RANBP6O60518 1105 aaKnown RBP11.09□□□□□ -0.63
SMIM27-201ENST00000425533 DCNP07585 359 aaKnown RBP11.09□□□□□ -0.63
SMIM27-201ENST00000425533 TOP1P11387 765 aaKnown RBP11.09□□□□□ -0.63
SMIM27-201ENST00000425533 MYCLP12524 364 aaPredicted RBP11.09□□□□□ -0.63
SMIM27-201ENST00000425533 ZNF543Q08ER8 600 aa11.09□□□□□ -0.63
SMIM27-201ENST00000425533 DMWDQ09019 674 aa11.09□□□□□ -0.63
SMIM27-201ENST00000425533 PPM1JQ5JR12 505 aa11.09□□□□□ -0.63
SMIM27-201ENST00000425533 RARS2Q5T160 578 aaKnown RBP11.09□□□□□ -0.63
SMIM27-201ENST00000425533 KIAA1841Q6NSI8 718 aa11.09□□□□□ -0.63
SMIM27-201ENST00000425533 KANK3Q6NY19 840 aa11.09□□□□□ -0.63
SMIM27-201ENST00000425533 TAF2Q6P1X5 1199 aa11.09□□□□□ -0.63
SMIM27-201ENST00000425533 MCF2L2Q86YR7 1114 aa11.09□□□□□ -0.63
SMIM27-201ENST00000425533 C1orf210Q8IVY1 113 aa11.09□□□□□ -0.63
SMIM27-201ENST00000425533 MRPS27Q92552 414 aaKnown RBP11.09□□□□□ -0.63
SMIM27-201ENST00000425533 CPVLQ9H3G5 476 aa11.09□□□□□ -0.63
SMIM27-201ENST00000425533 LRFN2Q9ULH4 789 aa11.09□□□□□ -0.63
SMIM27-201ENST00000425533 LZTS1Q9Y250 596 aa11.09□□□□□ -0.63
SMIM27-201ENST00000425533 KAT6AQ92794 2004 aa11.09□□□□□ -0.63
SMIM27-201ENST00000425533 MYH6P13533 1939 aa11.09□□□□□ -0.63
SMIM27-201ENST00000425533 NRCAMQ92823 1304 aa11.09□□□□□ -0.63
SMIM27-201ENST00000425533 SPEGQ15772 3267 aa11.08□□□□□ -0.64
SMIM27-201ENST00000425533 TBKBP1A7MCY6 615 aa11.08□□□□□ -0.64
SMIM27-201ENST00000425533 NOP56O00567 594 aaKnown RBP11.08□□□□□ -0.64
SMIM27-201ENST00000425533 CFHP08603 1231 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms