RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 GH1P01241 217 aa11.69□□□□□ -0.54
PTCH1-206ENST00000421141 ATP5DP30049 168 aa11.69□□□□□ -0.54
PTCH1-206ENST00000421141 DGKDQ16760 1214 aa11.69□□□□□ -0.54
PTCH1-206ENST00000421141 IFT81Q8WYA0 676 aa11.69□□□□□ -0.54
PTCH1-206ENST00000421141 CNOT6LQ96LI5 555 aaKnown RBP11.69□□□□□ -0.54
PTCH1-206ENST00000421141 ARFGAP3Q9NP61 516 aa11.69□□□□□ -0.54
PTCH1-206ENST00000421141 MYH2Q9UKX2 1941 aa11.69□□□□□ -0.54
PTCH1-206ENST00000421141 XRCC6P12956 609 aaKnown RBP eCLIP11.69□□□□□ -0.54
PTCH1-206ENST00000421141 ZNF658Q5TYW1 1059 aaPredicted RBP11.69□□□□□ -0.54
PTCH1-206ENST00000421141 SMARCAD1Q9H4L7 1026 aa11.69□□□□□ -0.54
PTCH1-206ENST00000421141 NXF1Q9UBU9 619 aaKnown RBP11.69□□□□□ -0.54
PTCH1-206ENST00000421141 GPR75-ASB3A0A0A6YYF3 556 aa11.69□□□□□ -0.54
PTCH1-206ENST00000421141 CYP2B6P20813 491 aa11.69□□□□□ -0.54
PTCH1-206ENST00000421141 PLCB4Q15147 1175 aa11.69□□□□□ -0.54
PTCH1-206ENST00000421141 SIX6OS1Q8N1H7 587 aa11.69□□□□□ -0.54
PTCH1-206ENST00000421141 U2AF1L4Q8WU68 220 aaKnown RBP11.69□□□□□ -0.54
PTCH1-206ENST00000421141 GCNT4Q9P109 453 aa11.69□□□□□ -0.54
PTCH1-206ENST00000421141 CASZ1Q86V15 1759 aa11.68□□□□□ -0.54
PTCH1-206ENST00000421141 KRT10P13645 584 aa11.68□□□□□ -0.54
PTCH1-206ENST00000421141 KIF23Q02241 960 aaPredicted RBP11.68□□□□□ -0.54
PTCH1-206ENST00000421141 PRPSAP1Q14558 356 aa11.68□□□□□ -0.54
PTCH1-206ENST00000421141 MICALCLQ6ZW33 695 aa11.68□□□□□ -0.54
PTCH1-206ENST00000421141 CCDC51Q96ER9 411 aa11.68□□□□□ -0.54
PTCH1-206ENST00000421141 GADD45BO75293 160 aaPredicted RBP11.68□□□□□ -0.54
PTCH1-206ENST00000421141 ABCB4P21439 1286 aa11.68□□□□□ -0.54
PTCH1-206ENST00000421141 SLFNL1Q499Z3 407 aa11.68□□□□□ -0.54
PTCH1-206ENST00000421141 PCIF1Q9H4Z3 704 aa11.68□□□□□ -0.54
PTCH1-206ENST00000421141 IPO11Q9UI26 975 aaKnown RBP11.68□□□□□ -0.54
PTCH1-206ENST00000421141 LMO7Q8WWI1 1683 aa11.68□□□□□ -0.54
PTCH1-206ENST00000421141 MANSC4A6NHS7 340 aaPredicted RBP11.68□□□□□ -0.54
PTCH1-206ENST00000421141 PSMC5P62195 406 aa11.68□□□□□ -0.54
PTCH1-206ENST00000421141 TAOK1Q7L7X3 1001 aa11.68□□□□□ -0.54
PTCH1-206ENST00000421141 PPM1EQ8WY54 764 aa11.68□□□□□ -0.54
PTCH1-206ENST00000421141 BHMT2Q9H2M3 363 aa11.68□□□□□ -0.54
PTCH1-206ENST00000421141 GDAQ9Y2T3 454 aa11.68□□□□□ -0.54
PTCH1-206ENST00000421141 PXDNQ92626 1479 aa11.68□□□□□ -0.54
PTCH1-206ENST00000421141 SYNJ2BP-COX16A0A087WUM0 186 aa11.68□□□□□ -0.54
PTCH1-206ENST00000421141 UAP1Q16222 522 aaPredicted RBP11.68□□□□□ -0.54
PTCH1-206ENST00000421141 DAAM2Q86T65 1068 aa11.68□□□□□ -0.54
PTCH1-206ENST00000421141 SCYL3Q8IZE3 742 aa11.68□□□□□ -0.54
PTCH1-206ENST00000421141 NSRP1Q9H0G5 558 aaKnown RBP11.68□□□□□ -0.54
PTCH1-206ENST00000421141 COX16Q9P0S2 106 aa11.68□□□□□ -0.54
PTCH1-206ENST00000421141 NDUFB10O96000 172 aa11.68□□□□□ -0.54
PTCH1-206ENST00000421141 TUBB2AQ13885 445 aa11.68□□□□□ -0.54
PTCH1-206ENST00000421141 PPP2R5DQ14738 602 aa11.68□□□□□ -0.54
PTCH1-206ENST00000421141 OPTNQ96CV9 577 aa11.68□□□□□ -0.54
PTCH1-206ENST00000421141 TIGD1Q96MW7 591 aa11.68□□□□□ -0.54
PTCH1-206ENST00000421141 NAPGQ99747 312 aaPredicted RBP11.68□□□□□ -0.54
PTCH1-206ENST00000421141 TUBB2BQ9BVA1 445 aa11.68□□□□□ -0.54
PTCH1-206ENST00000421141 MAGEA1P43355 309 aa11.68□□□□□ -0.54
PTCH1-206ENST00000421141 SPATA1Q5VX52 437 aa11.68□□□□□ -0.54
PTCH1-206ENST00000421141 PCDHA10Q9Y5I2 948 aa11.68□□□□□ -0.54
PTCH1-206ENST00000421141 ALDH3A1P30838 453 aa11.67□□□□□ -0.54
PTCH1-206ENST00000421141 NME8Q8N427 588 aa11.67□□□□□ -0.54
PTCH1-206ENST00000421141 DONSONQ9NYP3 566 aa11.67□□□□□ -0.54
PTCH1-206ENST00000421141 CAMTA1Q9Y6Y1 1673 aa11.67□□□□□ -0.54
PTCH1-206ENST00000421141 P4HBP07237 508 aaKnown RBP11.67□□□□□ -0.54
PTCH1-206ENST00000421141 TUBBP07437 444 aa11.67□□□□□ -0.54
PTCH1-206ENST00000421141 MCM6Q14566 821 aa11.67□□□□□ -0.54
PTCH1-206ENST00000421141 RPS6KA1Q15418 735 aa11.67□□□□□ -0.54
PTCH1-206ENST00000421141 FAM83AQ86UY5 434 aa11.67□□□□□ -0.54
PTCH1-206ENST00000421141 SPDYE2BA6NHP3 402 aa11.67□□□□□ -0.54
PTCH1-206ENST00000421141 OPA1O60313 960 aa11.67□□□□□ -0.54
PTCH1-206ENST00000421141 SPDYE6P0CI01 402 aa11.67□□□□□ -0.54
PTCH1-206ENST00000421141 MAPK4P31152 587 aa11.67□□□□□ -0.54
PTCH1-206ENST00000421141 PPFIA1Q13136 1202 aa11.67□□□□□ -0.54
PTCH1-206ENST00000421141 CYFIP1Q7L576 1253 aa11.67□□□□□ -0.54
PTCH1-206ENST00000421141 CEP57Q86XR8 500 aa11.67□□□□□ -0.54
PTCH1-206ENST00000421141 UBE2Q2LH0YL09 131 aa11.67□□□□□ -0.54
PTCH1-206ENST00000421141 CLIC2O15247 247 aa11.67□□□□□ -0.54
PTCH1-206ENST00000421141 POLR2FP61218 127 aaKnown RBP11.67□□□□□ -0.54
PTCH1-206ENST00000421141 CFAP157Q5JU67 520 aa11.67□□□□□ -0.54
PTCH1-206ENST00000421141 SLC38A10Q9HBR0 1119 aa11.67□□□□□ -0.54
PTCH1-206ENST00000421141 SEPT10Q9P0V9 454 aa11.67□□□□□ -0.54
PTCH1-206ENST00000421141 NYAP2Q9P242 653 aa11.67□□□□□ -0.54
PTCH1-206ENST00000421141 ASIC3Q9UHC3 531 aa11.67□□□□□ -0.54
PTCH1-206ENST00000421141 SPDYE16A6NNV3 312 aaPredicted RBP11.67□□□□□ -0.54
PTCH1-206ENST00000421141 ACTN1P12814 892 aa11.67□□□□□ -0.54
PTCH1-206ENST00000421141 ZNF543Q08ER8 600 aa11.67□□□□□ -0.54
PTCH1-206ENST00000421141 SPDYE2Q495Y8 402 aa11.67□□□□□ -0.54
PTCH1-206ENST00000421141 MUM1L1Q5H9M0 696 aa11.67□□□□□ -0.54
PTCH1-206ENST00000421141 MAP7D3Q8IWC1 876 aa11.67□□□□□ -0.54
PTCH1-206ENST00000421141 ARRDC4Q8NCT1 418 aa11.67□□□□□ -0.54
PTCH1-206ENST00000421141 OR8K1Q8NGG5 319 aa11.67□□□□□ -0.54
PTCH1-206ENST00000421141 EXOC4Q96A65 974 aa11.67□□□□□ -0.54
PTCH1-206ENST00000421141 LXNQ9BS40 222 aa11.67□□□□□ -0.54
PTCH1-206ENST00000421141 SPZ1Q9BXG8 430 aa11.67□□□□□ -0.54
PTCH1-206ENST00000421141 HUS1O60921 280 aa11.67□□□□□ -0.54
PTCH1-206ENST00000421141 RBM10P98175 930 aaKnown RBP11.67□□□□□ -0.54
PTCH1-206ENST00000421141 CEP55Q53EZ4 464 aa11.67□□□□□ -0.54
PTCH1-206ENST00000421141 RYBPQ8N488 228 aaPredicted RBP11.67□□□□□ -0.54
PTCH1-206ENST00000421141 EMILIN3Q9NT22 766 aa11.67□□□□□ -0.54
PTCH1-206ENST00000421141 DDNO94850 711 aaPredicted RBP11.66□□□□□ -0.54
PTCH1-206ENST00000421141 IVLP07476 585 aa11.66□□□□□ -0.54
PTCH1-206ENST00000421141 PADI6Q6TGC4 694 aa11.66□□□□□ -0.54
PTCH1-206ENST00000421141 P2RX5Q93086 422 aa11.66□□□□□ -0.54
PTCH1-206ENST00000421141 HEXIM2Q96MH2 286 aaKnown RBP11.66□□□□□ -0.54
PTCH1-206ENST00000421141 NFKBIAP25963 317 aa11.66□□□□□ -0.54
PTCH1-206ENST00000421141 EEF1GP26641 437 aaKnown RBP11.66□□□□□ -0.54
PTCH1-206ENST00000421141 LRRC63Q05C16 580 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms