RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 TCTN1Q2MV58 587 aa24.31■■□□□ 1.48
PTPN4-202ENST00000420482 FAM117BQ6P1L5 589 aa24.31■■□□□ 1.48
PTPN4-202ENST00000420482 TMCO2Q7Z6W1 182 aaPredicted RBP24.31■■□□□ 1.48
PTPN4-202ENST00000420482 BICD2Q8TD16 824 aa24.31■■□□□ 1.48
PTPN4-202ENST00000420482 ADAMTS19Q8TE59 1207 aa24.31■■□□□ 1.48
PTPN4-202ENST00000420482 KAT6AQ92794 2004 aa24.31■■□□□ 1.48
PTPN4-202ENST00000420482 IFIH1Q9BYX4 1025 aaKnown RBP24.31■■□□□ 1.48
PTPN4-202ENST00000420482 MTCH2Q9Y6C9 303 aa24.31■■□□□ 1.48
PTPN4-202ENST00000420482 NID2Q14112 1375 aa24.3■■□□□ 1.48
PTPN4-202ENST00000420482 RFXAPO00287 272 aa24.3■■□□□ 1.48
PTPN4-202ENST00000420482 MEIS1O00470 390 aa24.3■■□□□ 1.48
PTPN4-202ENST00000420482 PRPF3O43395 683 aaKnown RBP24.3■■□□□ 1.48
PTPN4-202ENST00000420482 SLC26A2P50443 739 aa24.3■■□□□ 1.48
PTPN4-202ENST00000420482 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.3■■□□□ 1.48
PTPN4-202ENST00000420482 REXO1Q8N1G1 1221 aaKnown RBP24.3■■□□□ 1.48
PTPN4-202ENST00000420482 ZMYND12Q9H0C1 365 aa24.3■■□□□ 1.48
PTPN4-202ENST00000420482 AGO4Q9HCK5 861 aaKnown RBP24.3■■□□□ 1.48
PTPN4-202ENST00000420482 TMEM260Q9NX78 707 aa24.3■■□□□ 1.48
PTPN4-202ENST00000420482 LMCD1Q9NZU5 365 aa24.3■■□□□ 1.48
PTPN4-202ENST00000420482 TCEAL9Q9UHQ7 104 aa24.3■■□□□ 1.48
PTPN4-202ENST00000420482 TRPC6Q9Y210 931 aa24.3■■□□□ 1.48
PTPN4-202ENST00000420482 LCHNA4D1U4 455 aa24.29■■□□□ 1.48
PTPN4-202ENST00000420482 STAT5BP51692 787 aa24.29■■□□□ 1.48
PTPN4-202ENST00000420482 ACTR2P61160 394 aa24.29■■□□□ 1.48
PTPN4-202ENST00000420482 PLPPR4Q7Z2D5 763 aa24.29■■□□□ 1.48
PTPN4-202ENST00000420482 CCDC148Q8NFR7 591 aa24.29■■□□□ 1.48
PTPN4-202ENST00000420482 CYP2W1Q8TAV3 490 aa24.29■■□□□ 1.48
PTPN4-202ENST00000420482 AGXT2Q9BYV1 514 aa24.29■■□□□ 1.48
PTPN4-202ENST00000420482 MBLAC1A4D2B0 266 aaPredicted RBP24.28■■□□□ 1.48
PTPN4-202ENST00000420482 M0QZ92 97 aa24.28■■□□□ 1.48
PTPN4-202ENST00000420482 ARHGEF15O94989 841 aa24.28■■□□□ 1.48
PTPN4-202ENST00000420482 ARP10275 920 aa24.28■■□□□ 1.48
PTPN4-202ENST00000420482 ERVK-21P61565 698 aa24.28■■□□□ 1.48
PTPN4-202ENST00000420482 IGBP1P78318 339 aa24.28■■□□□ 1.48
PTPN4-202ENST00000420482 SETQ01105 290 aaPredicted RBP24.28■■□□□ 1.48
PTPN4-202ENST00000420482 IER5Q5VY09 327 aa24.28■■□□□ 1.48
PTPN4-202ENST00000420482 JAKMIP3Q5VZ66 844 aa24.28■■□□□ 1.48
PTPN4-202ENST00000420482 FAM160B1Q5W0V3 765 aa24.28■■□□□ 1.48
PTPN4-202ENST00000420482 UHRF1Q96T88 793 aaPredicted RBP24.28■■□□□ 1.48
PTPN4-202ENST00000420482 YME1L1Q96TA2 773 aa24.28■■□□□ 1.48
PTPN4-202ENST00000420482 RNF26Q9BY78 433 aaPredicted RBP24.28■■□□□ 1.48
PTPN4-202ENST00000420482 LINC01553A4QN01 128 aa24.27■■□□□ 1.48
PTPN4-202ENST00000420482 EPOPA6NHQ4 379 aa24.27■■□□□ 1.48
PTPN4-202ENST00000420482 INSRRP14616 1297 aa24.27■■□□□ 1.48
PTPN4-202ENST00000420482 GRB10Q13322 594 aa24.27■■□□□ 1.48
PTPN4-202ENST00000420482 PLA2G4DQ86XP0 818 aa24.27■■□□□ 1.48
PTPN4-202ENST00000420482 TOP1MTQ969P6 601 aa24.27■■□□□ 1.48
PTPN4-202ENST00000420482 SAMD11Q96NU1 681 aa24.27■■□□□ 1.48
PTPN4-202ENST00000420482 MTUS1Q9ULD2 1270 aa24.27■■□□□ 1.48
PTPN4-202ENST00000420482 COG5Q9UP83 839 aa24.27■■□□□ 1.48
PTPN4-202ENST00000420482 MICAL3Q7RTP6 2002 aa24.27■■□□□ 1.48
PTPN4-202ENST00000420482 BACH1O14867 736 aa24.26■■□□□ 1.47
PTPN4-202ENST00000420482 CYP3A4P08684 503 aa24.26■■□□□ 1.47
PTPN4-202ENST00000420482 HTRA4P83105 476 aaPredicted RBP24.26■■□□□ 1.47
PTPN4-202ENST00000420482 MKRN4PQ13434 485 aaPredicted RBP24.26■■□□□ 1.47
PTPN4-202ENST00000420482 RUFY4Q6ZNE9 571 aa24.26■■□□□ 1.47
PTPN4-202ENST00000420482 RUFY3Q7L099 469 aa24.26■■□□□ 1.47
PTPN4-202ENST00000420482 TRIM22Q8IYM9 498 aa24.26■■□□□ 1.47
PTPN4-202ENST00000420482 DNAJB3Q8WWF6 145 aa24.26■■□□□ 1.47
PTPN4-202ENST00000420482 CYP46A1Q9Y6A2 500 aa24.26■■□□□ 1.47
PTPN4-202ENST00000420482 UPP2O95045 317 aa24.25■■□□□ 1.47
PTPN4-202ENST00000420482 CHRNA1P02708 482 aa24.25■■□□□ 1.47
PTPN4-202ENST00000420482 GHRP10912 638 aa24.25■■□□□ 1.47
PTPN4-202ENST00000420482 ITGB3BPQ13352 177 aaPredicted RBP24.25■■□□□ 1.47
PTPN4-202ENST00000420482 PHKBQ93100 1093 aa24.25■■□□□ 1.47
PTPN4-202ENST00000420482 PCYT2Q99447 389 aa24.25■■□□□ 1.47
PTPN4-202ENST00000420482 SLC26A6Q9BXS9 759 aa24.25■■□□□ 1.47
PTPN4-202ENST00000420482 TBC1D22BQ9NU19 505 aa24.25■■□□□ 1.47
PTPN4-202ENST00000420482 SIP14410 1827 aa24.25■■□□□ 1.47
PTPN4-202ENST00000420482 POTEB3A0JP26 581 aa24.24■■□□□ 1.47
PTPN4-202ENST00000420482 IPO5O00410 1097 aaKnown RBP24.24■■□□□ 1.47
PTPN4-202ENST00000420482 ATG7O95352 703 aa24.24■■□□□ 1.47
PTPN4-202ENST00000420482 IFNAR1P17181 557 aa24.24■■□□□ 1.47
PTPN4-202ENST00000420482 EVCP57679 992 aa24.24■■□□□ 1.47
PTPN4-202ENST00000420482 MRPS6P82932 125 aaKnown RBP24.24■■□□□ 1.47
PTPN4-202ENST00000420482 PLCB4Q15147 1175 aa24.24■■□□□ 1.47
PTPN4-202ENST00000420482 MARCH8Q5T0T0 291 aa24.24■■□□□ 1.47
PTPN4-202ENST00000420482 MIS18BP1Q6P0N0 1132 aa24.24■■□□□ 1.47
PTPN4-202ENST00000420482 POTEBQ6S5H4 581 aa24.24■■□□□ 1.47
PTPN4-202ENST00000420482 FBXO22Q8NEZ5 403 aa24.24■■□□□ 1.47
PTPN4-202ENST00000420482 ZNF577Q9BSK1 485 aa24.24■■□□□ 1.47
PTPN4-202ENST00000420482 SQORQ9Y6N5 450 aa24.24■■□□□ 1.47
PTPN4-202ENST00000420482 DDX39AO00148 427 aaKnown RBP24.23■■□□□ 1.47
PTPN4-202ENST00000420482 CPLX1O14810 134 aa24.23■■□□□ 1.47
PTPN4-202ENST00000420482 PDIA3P30101 505 aaKnown RBP24.23■■□□□ 1.47
PTPN4-202ENST00000420482 PKN1Q16512 942 aa24.23■■□□□ 1.47
PTPN4-202ENST00000420482 CPLX2Q6PUV4 134 aaKnown RBP24.23■■□□□ 1.47
PTPN4-202ENST00000420482 TSHZ1Q6ZSZ6 1077 aa24.23■■□□□ 1.47
PTPN4-202ENST00000420482 NME8Q8N427 588 aa24.23■■□□□ 1.47
PTPN4-202ENST00000420482 SP7Q8TDD2 431 aaPredicted RBP24.23■■□□□ 1.47
PTPN4-202ENST00000420482 GDPD5Q8WTR4 605 aa24.23■■□□□ 1.47
PTPN4-202ENST00000420482 FAM49AQ9H0Q0 323 aaPredicted RBP24.23■■□□□ 1.47
PTPN4-202ENST00000420482 SUGCTQ9HAC7 445 aa24.23■■□□□ 1.47
PTPN4-202ENST00000420482 ZSWIM6Q9HCJ5 1215 aa24.23■■□□□ 1.47
PTPN4-202ENST00000420482 SH3GLB2Q9NR46 395 aa24.23■■□□□ 1.47
PTPN4-202ENST00000420482 PCDHA2Q9Y5H9 948 aa24.23■■□□□ 1.47
PTPN4-202ENST00000420482 CDY2AQ9Y6F7 541 aa24.23■■□□□ 1.47
PTPN4-202ENST00000420482 BRWD1Q9NSI6 2320 aa24.23■■□□□ 1.47
PTPN4-202ENST00000420482 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.22■■□□□ 1.47
PTPN4-202ENST00000420482 FAM86B1E9PN63 330 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms