RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 CWC27Q6UX04 472 aaKnown RBP11.8□□□□□ -0.52
TNFAIP3-202ENST00000420009 RUFY4Q6ZNE9 571 aa11.8□□□□□ -0.52
TNFAIP3-202ENST00000420009 CRIPAKQ8N1N5 446 aa11.8□□□□□ -0.52
TNFAIP3-202ENST00000420009 SMRP1Q8NCR6 262 aa11.8□□□□□ -0.52
TNFAIP3-202ENST00000420009 LINC01599Q8WXQ3 324 aa11.8□□□□□ -0.52
TNFAIP3-202ENST00000420009 P2RX5Q93086 422 aa11.8□□□□□ -0.52
TNFAIP3-202ENST00000420009 SNX27Q96L92 541 aa11.8□□□□□ -0.52
TNFAIP3-202ENST00000420009 PIGSQ96S52 555 aa11.8□□□□□ -0.52
TNFAIP3-202ENST00000420009 SENP7Q9BQF6 1050 aa11.8□□□□□ -0.52
TNFAIP3-202ENST00000420009 PLAGL2Q9UPG8 496 aa11.8□□□□□ -0.52
TNFAIP3-202ENST00000420009 ENPP3O14638 875 aa11.79□□□□□ -0.52
TNFAIP3-202ENST00000420009 DNAJB1P25685 340 aa11.79□□□□□ -0.52
TNFAIP3-202ENST00000420009 BTG3Q14201 252 aaPredicted RBP11.79□□□□□ -0.52
TNFAIP3-202ENST00000420009 FBXO47Q5MNV8 452 aa11.79□□□□□ -0.52
TNFAIP3-202ENST00000420009 UTP14CQ5TAP6 766 aaKnown RBP11.79□□□□□ -0.52
TNFAIP3-202ENST00000420009 CYB5R4Q7L1T6 521 aa11.79□□□□□ -0.52
TNFAIP3-202ENST00000420009 FAM212AQ96EL1 285 aa11.79□□□□□ -0.52
TNFAIP3-202ENST00000420009 TMEM121BQ9BXQ6 578 aaPredicted RBP11.79□□□□□ -0.52
TNFAIP3-202ENST00000420009 OSBPL3Q9H4L5 887 aa11.79□□□□□ -0.52
TNFAIP3-202ENST00000420009 DIAPH3Q9NSV4 1193 aa11.79□□□□□ -0.52
TNFAIP3-202ENST00000420009 CLEC1BQ9P126 229 aa11.79□□□□□ -0.52
TNFAIP3-202ENST00000420009 MRPL42Q9Y6G3 142 aaKnown RBP11.79□□□□□ -0.52
TNFAIP3-202ENST00000420009 MYO15AQ9UKN7 3530 aa11.79□□□□□ -0.52
TNFAIP3-202ENST00000420009 TTC3P53804 2025 aa11.79□□□□□ -0.52
TNFAIP3-202ENST00000420009 DOCK5Q9H7D0 1870 aa11.78□□□□□ -0.52
TNFAIP3-202ENST00000420009 PNMA6FA0A0J9YX94 578 aa11.78□□□□□ -0.52
TNFAIP3-202ENST00000420009 MBLAC1A4D2B0 266 aaPredicted RBP11.78□□□□□ -0.52
TNFAIP3-202ENST00000420009 TMEM221A6NGB7 291 aa11.78□□□□□ -0.52
TNFAIP3-202ENST00000420009 LOC730098B7Z3J9 87 aa11.78□□□□□ -0.52
TNFAIP3-202ENST00000420009 M0R296 226 aa11.78□□□□□ -0.52
TNFAIP3-202ENST00000420009 CSPG5O95196 566 aa11.78□□□□□ -0.52
TNFAIP3-202ENST00000420009 GLP2RO95838 553 aa11.78□□□□□ -0.52
TNFAIP3-202ENST00000420009 NDUFV1P49821 464 aa11.78□□□□□ -0.52
TNFAIP3-202ENST00000420009 PTPN5P54829 565 aa11.78□□□□□ -0.52
TNFAIP3-202ENST00000420009 RRP1P56182 461 aaKnown RBP11.78□□□□□ -0.52
TNFAIP3-202ENST00000420009 COASYQ13057 564 aa11.78□□□□□ -0.52
TNFAIP3-202ENST00000420009 CBX2Q14781 532 aaPredicted RBP11.78□□□□□ -0.52
TNFAIP3-202ENST00000420009 NAALADL2Q58DX5 795 aa11.78□□□□□ -0.52
TNFAIP3-202ENST00000420009 PCNX4Q63HM2 1172 aa11.78□□□□□ -0.52
TNFAIP3-202ENST00000420009 XRRA1Q6P2D8 792 aa11.78□□□□□ -0.52
TNFAIP3-202ENST00000420009 TSHZ1Q6ZSZ6 1077 aa11.78□□□□□ -0.52
TNFAIP3-202ENST00000420009 TRIM67Q6ZTA4 783 aa11.78□□□□□ -0.52
TNFAIP3-202ENST00000420009 ADGRD2Q7Z7M1 963 aa11.78□□□□□ -0.52
TNFAIP3-202ENST00000420009 CMTR2Q8IYT2 770 aaKnown RBP11.78□□□□□ -0.52
TNFAIP3-202ENST00000420009 EFHBQ8N7U6 833 aa11.78□□□□□ -0.52
TNFAIP3-202ENST00000420009 IGFLR1Q9H665 355 aa11.78□□□□□ -0.52
TNFAIP3-202ENST00000420009 ALG13Q9NP73 1137 aaKnown RBP11.78□□□□□ -0.52
TNFAIP3-202ENST00000420009 RTEL1Q9NZ71 1219 aa11.78□□□□□ -0.52
TNFAIP3-202ENST00000420009 TUBE1Q9UJT0 475 aa11.78□□□□□ -0.52
TNFAIP3-202ENST00000420009 CFAP54Q96N23 3096 aa11.78□□□□□ -0.52
TNFAIP3-202ENST00000420009 KIAA1671Q9BY89 1806 aa11.77□□□□□ -0.52
TNFAIP3-202ENST00000420009 KMT2EQ8IZD2 1858 aa11.77□□□□□ -0.53
TNFAIP3-202ENST00000420009 HIP1O00291 1037 aa11.77□□□□□ -0.53
TNFAIP3-202ENST00000420009 ITGB1P05556 798 aa11.77□□□□□ -0.53
TNFAIP3-202ENST00000420009 TCF7P36402 384 aaPredicted RBP11.77□□□□□ -0.53
TNFAIP3-202ENST00000420009 SP4Q02446 784 aa11.77□□□□□ -0.53
TNFAIP3-202ENST00000420009 TROAPQ12815 778 aa11.77□□□□□ -0.53
TNFAIP3-202ENST00000420009 TCF15Q12870 199 aa11.77□□□□□ -0.53
TNFAIP3-202ENST00000420009 PPFIA1Q13136 1202 aa11.77□□□□□ -0.53
TNFAIP3-202ENST00000420009 GRIK4Q16099 956 aa11.77□□□□□ -0.53
TNFAIP3-202ENST00000420009 PKN1Q16512 942 aa11.77□□□□□ -0.53
TNFAIP3-202ENST00000420009 MARCH8Q5T0T0 291 aa11.77□□□□□ -0.53
TNFAIP3-202ENST00000420009 RSPH3Q86UC2 560 aa11.77□□□□□ -0.53
TNFAIP3-202ENST00000420009 PLEKHM2Q8IWE5 1019 aa11.77□□□□□ -0.53
TNFAIP3-202ENST00000420009 SMC5Q8IY18 1101 aa11.77□□□□□ -0.53
TNFAIP3-202ENST00000420009 SPPL3Q8TCT6 385 aa11.77□□□□□ -0.53
TNFAIP3-202ENST00000420009 PPP2R3CQ969Q6 453 aa11.77□□□□□ -0.53
TNFAIP3-202ENST00000420009 PRRX2Q99811 253 aa11.77□□□□□ -0.53
TNFAIP3-202ENST00000420009 IL25Q9H293 177 aa11.77□□□□□ -0.53
TNFAIP3-202ENST00000420009 AGO3Q9H9G7 860 aaKnown RBP11.77□□□□□ -0.53
TNFAIP3-202ENST00000420009 CDY2AQ9Y6F7 541 aa11.77□□□□□ -0.53
TNFAIP3-202ENST00000420009 PIK3CDO00329 1044 aa11.76□□□□□ -0.53
TNFAIP3-202ENST00000420009 KCNA2P16389 499 aa11.76□□□□□ -0.53
TNFAIP3-202ENST00000420009 MRPS6P82932 125 aaKnown RBP11.76□□□□□ -0.53
TNFAIP3-202ENST00000420009 ZXDAP98168 799 aa11.76□□□□□ -0.53
TNFAIP3-202ENST00000420009 MMRN1Q13201 1228 aa11.76□□□□□ -0.53
TNFAIP3-202ENST00000420009 NPAS4Q8IUM7 802 aa11.76□□□□□ -0.53
TNFAIP3-202ENST00000420009 KLHL23Q8NBE8 558 aa11.76□□□□□ -0.53
TNFAIP3-202ENST00000420009 GIMAP8Q8ND71 665 aaPredicted RBP11.76□□□□□ -0.53
TNFAIP3-202ENST00000420009 DNAJB3Q8WWF6 145 aa11.76□□□□□ -0.53
TNFAIP3-202ENST00000420009 PBXIP1Q96AQ6 731 aa11.76□□□□□ -0.53
TNFAIP3-202ENST00000420009 SENP2Q9HC62 589 aa11.76□□□□□ -0.53
TNFAIP3-202ENST00000420009 ERAP1Q9NZ08 941 aa11.76□□□□□ -0.53
TNFAIP3-202ENST00000420009 USP15Q9Y4E8 981 aaPredicted RBP11.76□□□□□ -0.53
TNFAIP3-202ENST00000420009 ZDBF2Q9HCK1 2354 aa11.75□□□□□ -0.53
TNFAIP3-202ENST00000420009 GSTTP1A0A1W2PQM5 241 aa11.75□□□□□ -0.53
TNFAIP3-202ENST00000420009 MEIS2O14770 477 aa11.75□□□□□ -0.53
TNFAIP3-202ENST00000420009 ATP9AO75110 1047 aa11.75□□□□□ -0.53
TNFAIP3-202ENST00000420009 RPLP2P05387 115 aaKnown RBP11.75□□□□□ -0.53
TNFAIP3-202ENST00000420009 MARK3P27448 753 aa11.75□□□□□ -0.53
TNFAIP3-202ENST00000420009 CD52P31358 61 aa11.75□□□□□ -0.53
TNFAIP3-202ENST00000420009 NRIP1P48552 1158 aa11.75□□□□□ -0.53
TNFAIP3-202ENST00000420009 RTN4RL1Q86UN2 441 aaPredicted RBP11.75□□□□□ -0.53
TNFAIP3-202ENST00000420009 NLRX1Q86UT6 975 aa11.75□□□□□ -0.53
TNFAIP3-202ENST00000420009 CHD1LQ86WJ1 897 aa11.75□□□□□ -0.53
TNFAIP3-202ENST00000420009 SPNS2Q8IVW8 549 aa11.75□□□□□ -0.53
TNFAIP3-202ENST00000420009 SUGP1Q8IWZ8 645 aaKnown RBP11.75□□□□□ -0.53
TNFAIP3-202ENST00000420009 FBXL6Q8N531 539 aa11.75□□□□□ -0.53
TNFAIP3-202ENST00000420009 POF1BQ8WVV4 589 aa11.75□□□□□ -0.53
TNFAIP3-202ENST00000420009 GPRASP2Q96D09 838 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms